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Erhan Bas, Ph.D.

Affiliations: 
2011 Electrical and Computer Engineering Northeastern University, Boston, MA, United States 
Area:
Electronics and Electrical Engineering, Bioinformatics Biology, Radiology
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"Erhan Bas"
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Deniz Erdogmus grad student 2011 Northeastern University
 (Extracting structural information on manifolds from high dimensional data and connectivity analysis of curvilinear structures in 3D biomedical images.)

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Publications

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Arganda-Carreras I, Turaga SC, Berger DR, et al. (2015) Crowdsourcing the creation of image segmentation algorithms for connectomics. Frontiers in Neuroanatomy. 9: 142
Ataer-Cansizoglu E, Bas E, Kalpathy-Cramer J, et al. (2013) Contour-based shape representation using principal curves Pattern Recognition. 46: 1140-1150
Bas E, Ataer-Cansizoglu E, Erdogmus D, et al. (2012) Retinal vasculature segmentation using principal spanning forests Proceedings - International Symposium On Biomedical Imaging. 1792-1795
Bas E, Erdogmus D, Draft RW, et al. (2012) Local tracing of curvilinear structures in volumetric color images: Application to the Brainbow analysis Journal of Visual Communication and Image Representation. 23: 1260-1271
Ataer-Cansizoglu E, Ghadarghadar N, Zareian R, et al. (2011) Motion flow analysis in cell videos using a multi-level clustering method. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 7767-70
You S, Bas E, Ataer-Cansizoglu E, et al. (2011) Principal curve based semi-automatic segmentation of organs in 3D-CT. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 6220-3
You S, Bas E, Erdogmus D. (2011) Extraction of samples from airway and vessel trees in 3D lung CT based on a multi-scale principal curve tracing algorithm. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 5157-60
Kurugol S, Bas E, Erdogmus D, et al. (2011) Centerline extraction with principal curve tracing to improve 3D level set esophagus segmentation in CT images. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 3403-6
Zupanc J, Dobnikar A, Drobne D, et al. (2011) Biological reactivity of nanoparticles: mosaics from optical microscopy videos of giant lipid vesicles. Journal of Biomedical Optics. 16: 026003
Bas E, Erdogmus D. (2011) Principal curves as skeletons of tubular objects: locally characterizing the structures of axons. Neuroinformatics. 9: 181-91
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