Indika Rajapakse, Ph.D.

2004 Washington State University, Pullman, WA, United States 
Mathematics, Neuroscience Biology
"Indika Rajapakse"


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Valipuram S. Manoranjan grad student 2004 WSU
 (Mathematical model for neuronal groups.)
Mark T. Groudine post-doc 2012 Fred Hutchinson Cancer Center (Neurotree)


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Laura Seaman grad student 2017 University of Michigan
Scott Ronquist grad student 2019 University of Michigan
Can Chen grad student 2021 University of Michigan
Stephen Lindsly grad student 2021 University of Michigan (Computational Biology Tree)
Gabrielle Dotson grad student 2022 University of Michigan (Computational Biology Tree)
Sijia Liu post-doc 2016-2017 University of Michigan
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Znaidi MR, Sia J, Ronquist S, et al. (2023) A unified approach of detecting phase transition in time-varying complex networks. Scientific Reports. 13: 17948
Stansbury CM, Dotson GA, Pugh H, et al. (2023) A lipid-associated macrophage lineage rewires the spatial landscape of adipose tissue in early obesity. Jci Insight
Pickard J, Chen C, Salman R, et al. (2023) HAT: Hypergraph analysis toolbox. Plos Computational Biology. 19: e1011190
Dotson GA, Chen C, Lindsly S, et al. (2022) Deciphering multi-way interactions in the human genome. Nature Communications. 13: 5498
Sun Y, Dotson GA, Muir LA, et al. (2022) Rearrangement of T Cell genome architecture regulates GVHD. Iscience. 25: 104846
Muir LA, Cho KW, Geletka LM, et al. (2022) Human CD206+ macrophages associate with diabetes and adipose tissue lymphoid clusters. Jci Insight
Lindsly S, Jia W, Chen H, et al. (2021) Functional organization of the maternal and paternal human 4D Nucleome. Iscience. 24: 103452
Lindsly S, Gupta M, Stansbury C, et al. (2021) Understanding memory B cell selection. Journal of Theoretical Biology. 531: 110905
Sweeney P, Chen C, Rajapakse I, et al. (2021) Network dynamics of hypothalamic feeding neurons. Proceedings of the National Academy of Sciences of the United States of America. 118
Lindsly S, Chen C, Liu S, et al. (2021) 4DNvestigator: Time Series Genomic Data Analysis Toolbox. Nucleus (Austin, Tex.)
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