Rudiyanto Gunawan, Ph.D.

2003 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Chemical Engineering
"Rudiyanto Gunawan"


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Richard D. Braatz grad student 2003 UIUC
 (Modeling and control of transient enhanced diffusion of boron in silicon.)
Francis J. Doyle post-doc 2003-2006 UC Santa Barbara (E-Tree)


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Zhi Yang Tam grad student 2008-2012 ETH Zürich
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Noh H, Hua Z, Chrysinas P, et al. (2021) DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks. Bmc Bioinformatics. 22: 108
Lakshmanan LN, Yee Z, Ng LF, et al. (2018) Clonal expansion of mitochondrial DNA deletions is a private mechanism of aging in long-lived animals. Aging Cell. e12814
Noh H, Shoemaker JE, Gunawan R. (2018) Network perturbation analysis of gene transcriptional profiles reveals protein targets and mechanism of action of drugs and influenza A viral infection. Nucleic Acids Research
Kyriakopoulos S, Ang KS, Lakshmanan M, et al. (2017) Kinetic modeling of mammalian cell culture bioprocessing: the quest to advance biomanufacturing. Biotechnology Journal
Liu Y, Gunawan R. (2017) Bioprocess optimization under uncertainty using ensemble modeling. Journal of Biotechnology
Liu Y, Manesso E, Gunawan R. (2015) REDEMPTION: reduced dimension ensemble modeling and parameter estimation. Bioinformatics (Oxford, England). 31: 3387-9
Tam ZY, Gruber J, Halliwell B, et al. (2015) Context-Dependent Role of Mitochondrial Fusion-Fission in Clonal Expansion of mtDNA Mutations. Plos Computational Biology. 11: e1004183
Tam ZY, Gruber J, Ng LF, et al. (2014) Effects of lithium on age-related decline in mitochondrial turnover and function in Caenorhabditis elegans. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 69: 810-20
Perumal TM, Gunawan R. (2014) PathPSA: A dynamical pathway-based parametric sensitivity analysis Industrial and Engineering Chemistry Research. 53: 9149-9157
Tam ZY, Gruber J, Halliwell B, et al. (2013) Mathematical modeling of the role of mitochondrial fusion and fission in mitochondrial DNA maintenance. Plos One. 8: e76230
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