Ahmet Ay, Ph.D.

2009 Michigan State University, East Lansing, MI 
Applied Mathematics, Molecular Biology, Bioinformatics Biology
"Ahmet Ay"


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ChiChia Chiu grad student 2009 Michigan State
 (Deciphering cis-regulatory transcriptional grammar in Drosophila melanogaster by mathematical models.)
David Arnosti grad student 2006-2010 Colgate University (FlyTree)
 (computational biologist)
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Ren Y, Wang Q, Hasan MM, et al. (2016) Identifying the topology of signaling networks from partial RNAi data. Bmc Systems Biology. 10: 53
Belanger KD, Larson N, Kahn J, et al. (2016) Mutant Screen Report: Microarray Analysis of Gene Expression in S. cerevisiae kap108Δ Mutants Upon Addition of Oxidative Stress. G3 (Bethesda, Md.)
Kok K, Ay A, Li LM, et al. (2015) Genome-wide errant targeting by Hairy. Elife. 4
Ay A, Gong D, Kahveci T. (2015) Hierarchical decomposition of dynamically evolving regulatory networks. Bmc Bioinformatics. 16: 161
Ay A, Wilner N, Yildirim N. (2015) Mathematical modeling deciphers the benefits of alternatively-designed conserved activatory and inhibitory gene circuits. Molecular Biosystems. 11: 2017-30
Alim MA, Ay A, Hasan MM, et al. (2015) Multiple reference networks improve accuracy of signaling network construction Bcb 2015 - 6th Acm Conference On Bioinformatics, Computational Biology, and Health Informatics. 176-185
Wang Q, Ren Y, Hasan MM, et al. (2015) Construction of signaling networks with incomplete RNAi data Proceedings - 2015 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2015. 157-162
Ay AA, Ulucanlar H, Ay A, et al. (2014) Risk factors for perioperative anxiety in laparoscopic surgery. Jsls : Journal of the Society of Laparoendoscopic Surgeons / Society of Laparoendoscopic Surgeons. 18
Ay A, Gong D, Kahveci T. (2014) Network-based Prediction of Cancer under Genetic Storm. Cancer Informatics. 13: 15-31
Ay A, Holland J, Sperlea A, et al. (2014) Spatial gradients of protein-level time delays set the pace of the traveling segmentation clock waves. Development (Cambridge, England). 141: 4158-67
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