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Oleg A. Igoshin, Ph.D. - Publications

Institution:
University of California, Berkeley, Berkeley, CA, United States
Area:
protein motors, eukaryotic and prokaryotic cell motility, membrane geometry and protein organization and pattern formation in neural systems
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Molinari S, Shis DL, Bhakta SP, Chappell J, Igoshin OA, Bennett MR. A synthetic system for asymmetric cell division in Escherichia coli. Nature Chemical Biology. PMID 31406375 DOI: 10.1038/S41589-019-0339-X  0.311
2019 Igoshin OA, Chen J, Xing J, Liu J, Elston TC, Grabe M, Kim KS, Nirody JA, Rangamani P, Sun SX, Wang H, Wolgemuth C. Biophysics at the coffee shop: lessons learned working with George Oster. Molecular Biology of the Cell. 30: 1882-1889. PMID 31322997 DOI: 10.1091/Mbc.E19-02-0107  0.586
2019 Castillo-Hair SM, Baerman EA, Fujita M, Igoshin OA, Tabor JJ. Optogenetic control of Bacillus subtilis gene expression. Nature Communications. 10: 3099. PMID 31308373 DOI: 10.1038/S41467-019-10906-6  0.308
2019 Saha S, Patra P, Igoshin O, Kroos L. Systematic analysis of the Myxococcus xanthus developmental gene regulatory network supports posttranslational regulation of FruA by C-signaling. Molecular Microbiology. PMID 30895656 DOI: 10.1111/Mmi.14249  0.325
2018 Zhang Z, Igoshin OA, Cotter CR, Shimkets LJ. Agent-Based Modeling Reveals Possible Mechanisms for Observed Aggregation Cell Behaviors. Biophysical Journal. PMID 30514635 DOI: 10.1016/J.Bpj.2018.11.005  0.346
2018 Shis DL, Bennett MR, Igoshin OA. Dynamics of Bacterial Gene Regulatory Networks. Annual Review of Biophysics. PMID 29570353 DOI: 10.1146/Annurev-Biophys-070317-032947  0.355
2017 Fan Y, Evans CR, Barber KW, Banerjee K, Weiss KJ, Margolin W, Igoshin OA, Rinehart J, Ling J. Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness. Molecular Cell. PMID 28781237 DOI: 10.1016/J.Molcel.2017.07.010  0.326
2017 Winkle J, Igoshin OA, Bennett M, Josic K, Ott W. Modeling mechanical interactions in growing populations of rod-shaped bacteria. Physical Biology. PMID 28649958 DOI: 10.1088/1478-3975/Aa7Bae  0.362
2017 Cotter CR, Schüttler HB, Igoshin OA, Shimkets LJ. Data-driven modeling reveals cell behaviors controlling self-organization during Myxococcus xanthus development. Proceedings of the National Academy of Sciences of the United States of America. PMID 28533367 DOI: 10.1073/Pnas.1620981114  0.353
2016 Narula J, Fujita M, Igoshin OA. Functional requirements of cellular differentiation: lessons from Bacillus subtilis. Current Opinion in Microbiology. 34: 38-46. PMID 27501460 DOI: 10.1016/J.Mib.2016.07.011  0.338
2016 Patra P, Kissoon K, Cornejo I, Kaplan HB, Igoshin OA. Colony Expansion of Socially Motile Myxococcus xanthus Cells Is Driven by Growth, Motility, and Exopolysaccharide Production. Plos Computational Biology. 12: e1005010. PMID 27362260 DOI: 10.1371/Journal.Pcbi.1005010  0.355
2016 Narula J, Kuchina A, Zhang F, Fujita M, Süel GM, Igoshin OA. Slowdown of growth controls cellular differentiation. Molecular Systems Biology. 12: 871. PMID 27216630 DOI: 10.15252/Msb.20156691  0.312
2016 Ascensao JA, Datta P, Hancioglu B, Sontag E, Gennaro ML, Igoshin OA. Non-monotonic Response to Monotonic Stimulus: Regulation of Glyoxylate Shunt Gene-Expression Dynamics in Mycobacterium tuberculosis. Plos Computational Biology. 12: e1004741. PMID 26900694 DOI: 10.1371/Journal.Pcbi.1004741  0.338
2015 Balagam R, Igoshin OA. Mechanism for Collective Cell Alignment in Myxococcus xanthus Bacteria. Plos Computational Biology. 11: e1004474. PMID 26308508 DOI: 10.1371/Journal.Pcbi.1004474  0.303
2015 Narula J, Kuchina A, Lee DY, Fujita M, Süel GM, Igoshin OA. Chromosomal Arrangement of Phosphorelay Genes Couples Sporulation and DNA Replication. Cell. 162: 328-37. PMID 26165942 DOI: 10.1016/J.Cell.2015.06.012  0.301
2015 Castillo-Hair SM, Igoshin OA, Tabor JJ. How to train your microbe: methods for dynamically characterizing gene networks. Current Opinion in Microbiology. 24: 113-23. PMID 25677419 DOI: 10.1016/J.Mib.2015.01.008  0.339
2014 Balagam R, Litwin DB, Czerwinski F, Sun M, Kaplan HB, Shaevitz JW, Igoshin OA. Myxococcus xanthus gliding motors are elastically coupled to the substrate as predicted by the focal adhesion model of gliding motility. Plos Computational Biology. 10: e1003619. PMID 24810164 DOI: 10.1371/Journal.Pcbi.1003619  0.333
2014 Lee J, Tiwari A, Shum V, Mills GB, Mancini MA, Igoshin OA, Balázsi G. Unraveling the regulatory connections between two controllers of breast cancer cell fate. Nucleic Acids Research. 42: 6839-49. PMID 24792166 DOI: 10.1093/Nar/Gku360  0.316
2013 Vishnoi M, Narula J, Devi SN, Dao HA, Igoshin OA, Fujita M. Triggering sporulation in Bacillus subtilis with artificial two-component systems reveals the importance of proper Spo0A activation dynamics. Molecular Microbiology. 90: 181-94. PMID 23927765 DOI: 10.1111/Mmi.12357  0.323
2013 Narula J, Williams CJ, Tiwari A, Marks-Bluth J, Pimanda JE, Igoshin OA. Mathematical model of a gene regulatory network reconciles effects of genetic perturbations on hematopoietic stem cell emergence. Developmental Biology. 379: 258-69. PMID 23623899 DOI: 10.1016/J.Ydbio.2013.04.016  0.374
2012 Narula J, Devi SN, Fujita M, Igoshin OA. Ultrasensitivity of the Bacillus subtilis sporulation decision. Proceedings of the National Academy of Sciences of the United States of America. 109: E3513-22. PMID 23169620 DOI: 10.1073/Pnas.1213974109  0.33
2012 Zhang H, Vaksman Z, Litwin DB, Shi P, Kaplan HB, Igoshin OA. The mechanistic basis of Myxococcus xanthus rippling behavior and its physiological role during predation. Plos Computational Biology. 8: e1002715. PMID 23028301 DOI: 10.1371/Journal.Pcbi.1002715  0.363
2012 Tiwari A, Igoshin OA. Coupling between feedback loops in autoregulatory networks affects bistability range, open-loop gain and switching times. Physical Biology. 9: 055003. PMID 23011599 DOI: 10.1088/1478-3975/9/5/055003  0.313
2011 Ray JC, Tabor JJ, Igoshin OA. Non-transcriptional regulatory processes shape transcriptional network dynamics. Nature Reviews. Microbiology. 9: 817-28. PMID 21986901 DOI: 10.1038/Nrmicro2667  0.324
2011 Zhang H, Angus S, Tran M, Xie C, Igoshin OA, Welch RD. Quantifying aggregation dynamics during Myxococcus xanthus development. Journal of Bacteriology. 193: 5164-70. PMID 21784940 DOI: 10.1128/Jb.05188-11  0.308
2011 Tiwari A, Ray JC, Narula J, Igoshin OA. Bistable responses in bacterial genetic networks: designs and dynamical consequences. Mathematical Biosciences. 231: 76-89. PMID 21385588 DOI: 10.1016/J.Mbs.2011.03.004  0.309
2010 Narula J, Igoshin OA. Thermodynamic models of combinatorial gene regulation by distant enhancers. Iet Systems Biology. 4: 393-408. PMID 21073238 DOI: 10.1049/Iet-Syb.2010.0010  0.326
2010 Tiwari A, Balázsi G, Gennaro ML, Igoshin OA. The interplay of multiple feedback loops with post-translational kinetics results in bistability of mycobacterial stress response. Physical Biology. 7: 036005. PMID 20733247 DOI: 10.1088/1478-3975/7/3/036005  0.322
2010 Narula J, Smith AM, Gottgens B, Igoshin OA. Modeling reveals bistability and low-pass filtering in the network module determining blood stem cell fate. Plos Computational Biology. 6: e1000771. PMID 20463872 DOI: 10.1371/Journal.Pcbi.1000771  0.355
2010 Eswaramoorthy P, Dinh J, Duan D, Igoshin OA, Fujita M. Single-cell measurement of the levels and distributions of the phosphorelay components in a population of sporulating Bacillus subtilis cells. Microbiology (Reading, England). 156: 2294-304. PMID 20413551 DOI: 10.1099/Mic.0.038497-0  0.306
2010 Ray JC, Igoshin OA. Adaptable functionality of transcriptional feedback in bacterial two-component systems. Plos Computational Biology. 6: e1000676. PMID 20168997 DOI: 10.1371/Journal.Pcbi.1000676  0.336
2009 Chaudhury S, Igoshin OA. Dynamic disorder-driven substrate inhibition and bistability in a simple enzymatic reaction. The Journal of Physical Chemistry. B. 113: 13421-8. PMID 19757836 DOI: 10.1021/Jp907908D  0.306
2008 Veening JW, Igoshin OA, Eijlander RT, Nijland R, Hamoen LW, Kuipers OP. Transient heterogeneity in extracellular protease production by Bacillus subtilis. Molecular Systems Biology. 4: 184. PMID 18414485 DOI: 10.1038/Msb.2008.18  0.344
2008 Igoshin OA, Alves R, Savageau MA. Hysteretic and graded responses in bacterial two-component signal transduction. Molecular Microbiology. 68: 1196-215. PMID 18363790 DOI: 10.1111/J.1365-2958.2008.06221.X  0.334
2007 Igoshin OA, Brody MS, Price CW, Savageau MA. Distinctive topologies of partner-switching signaling networks correlate with their physiological roles. Journal of Molecular Biology. 369: 1333-52. PMID 17498739 DOI: 10.1016/J.Jmb.2007.04.021  0.323
2006 Igoshin OA, Price CW, Savageau MA. Signalling network with a bistable hysteretic switch controls developmental activation of the sigma transcription factor in Bacillus subtilis. Molecular Microbiology. 61: 165-84. PMID 16824103 DOI: 10.1111/J.1365-2958.2006.05212.X  0.331
2004 Igoshin OA, Neu J, Oster G. Developmental waves in myxobacteria: A distinctive pattern formation mechanism. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 041911. PMID 15600439 DOI: 10.1103/Physreve.70.041911  0.553
2004 Igoshin OA, Goldbeter A, Kaiser D, Oster G. A biochemical oscillator explains several aspects of Myxococcus xanthus behavior during development. Proceedings of the National Academy of Sciences of the United States of America. 101: 15760-5. PMID 15496464 DOI: 10.1073/Pnas.0407111101  0.546
2004 Igoshin OA, Kaiser D, Oster G. Breaking symmetry in myxobacteria. Current Biology : Cb. 14: R459-62. PMID 15203014 DOI: 10.1016/J.Cub.2004.06.007  0.484
2004 Igoshin OA, Welch R, Kaiser D, Oster G. Waves and aggregation patterns in myxobacteria. Proceedings of the National Academy of Sciences of the United States of America. 101: 4256-61. PMID 15020771 DOI: 10.1073/Pnas.0400704101  0.541
2004 Igoshin OA, Oster G. Rippling of myxobacteria. Mathematical Biosciences. 188: 221-33. PMID 14766104 DOI: 10.1016/J.Mbs.2003.04.001  0.544
2003 Wolgemuth CW, Igoshin O, Oster G. The motility of mollicutes. Biophysical Journal. 85: 828-42. PMID 12885631 DOI: 10.1016/S0006-3495(03)74523-8  0.535
2001 Igoshin OA, Mogilner A, Welch RD, Kaiser D, Oster G. Pattern formation and traveling waves in myxobacteria: theory and modeling. Proceedings of the National Academy of Sciences of the United States of America. 98: 14913-8. PMID 11752439 DOI: 10.1073/Pnas.221579598  0.584
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