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Michelle Girvan, Ph.D. - Publications

Affiliations: 
Physics University of Maryland, College Park, College Park, MD 
 2004 Cornell University, Ithaca, NY, United States 
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chandra S, Ott E, Girvan M. Critical network cascades with re-excitable nodes: Why treelike approximations usually work, when they break down, and how to correct them. Physical Review. E. 101: 062304. PMID 32688572 DOI: 10.1103/Physreve.101.062304  0.414
2020 Wikner A, Pathak J, Hunt B, Girvan M, Arcomano T, Szunyogh I, Pomerance A, Ott E. Combining machine learning with knowledge-based modeling for scalable forecasting and subgrid-scale closure of large, complex, spatiotemporal systems. Chaos (Woodbury, N.Y.). 30: 053111. PMID 32491877 DOI: 10.1063/5.0005541  0.3
2020 Vlachas PR, Pathak J, Hunt BR, Sapsis TP, Girvan M, Ott E, Koumoutsakos P. Backpropagation algorithms and Reservoir Computing in Recurrent Neural Networks for the forecasting of complex spatiotemporal dynamics. Neural Networks : the Official Journal of the International Neural Network Society. 126: 191-217. PMID 32248008 DOI: 10.1016/J.Neunet.2020.02.016  0.365
2019 Chandra S, Girvan M, Ott E. Complexity reduction ansatz for systems of interacting orientable agents: Beyond the Kuramoto model. Chaos (Woodbury, N.Y.). 29: 053107. PMID 31154774 DOI: 10.1063/1.5093038  0.364
2019 Chandra S, Girvan M, Ott E. Continuous versus Discontinuous Transitions in the D -Dimensional Generalized Kuramoto Model: Odd D is Different Physical Review X. 9. DOI: 10.1103/Physrevx.9.011002  0.338
2017 Lu Z, Pathak J, Hunt B, Girvan M, Brockett R, Ott E. Reservoir observers: Model-free inference of unmeasured variables in chaotic systems. Chaos (Woodbury, N.Y.). 27: 041102. PMID 28456169 DOI: 10.1063/1.4979665  0.362
2017 Chandra S, Hathcock D, Crain K, Antonsen TM, Girvan M, Ott E. Modeling the network dynamics of pulse-coupled neurons. Chaos (Woodbury, N.Y.). 27: 033102. PMID 28364765 DOI: 10.1063/1.4977514  0.444
2016 Lu Z, Squires S, Ott E, Girvan M. Inhibitory neurons promote robust critical firing dynamics in networks of integrate-and-fire neurons. Physical Review. E. 94: 062309. PMID 28085342 DOI: 10.1103/Physreve.94.062309  0.315
2016 Lu Z, Klein-Cardeña K, Lee S, Antonsen TM, Girvan M, Ott E. Resynchronization of circadian oscillators and the east-west asymmetry of jet-lag. Chaos (Woodbury, N.Y.). 26: 094811. PMID 27781473 DOI: 10.1063/1.4954275  0.358
2016 Burghardt K, Rand W, Girvan M. Competing opinions and stubborness: Connecting models to data. Physical Review. E. 93: 032305. PMID 27078364 DOI: 10.1103/Physreve.93.032305  0.339
2015 Ku WL, Girvan M, Ott E. Dynamical transitions in large systems of mean field-coupled Landau-Stuart oscillators: Extensive chaos and cluster states. Chaos (Woodbury, N.Y.). 25: 123122. PMID 26723161 DOI: 10.1063/1.4938534  0.35
2015 Glass K, Girvan M. Finding New Order in Biological Functions from the Network Structure of Gene Annotations. Plos Computational Biology. 11: e1004565. PMID 26588252 DOI: 10.1371/Journal.Pcbi.1004565  0.542
2015 Melchionna A, Caloca J, Squires S, Antonsen TM, Ott E, Girvan M. Impact of imperfect information on network attack. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 032807. PMID 25871157 DOI: 10.1103/Physreve.91.032807  0.384
2014 Zitin A, Gorowara A, Squires S, Herrera M, Antonsen TM, Girvan M, Ott E. Spatially embedded growing small-world networks. Scientific Reports. 4: 7047. PMID 25395180 DOI: 10.1038/Srep07047  0.719
2014 Squires S, Pomerance A, Girvan M, Ott E. Stability of Boolean networks: the joint effects of topology and update rules. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 90: 022814. PMID 25215788 DOI: 10.1103/Physreve.90.022814  0.416
2014 Glass K, Girvan M. Annotation enrichment analysis: an alternative method for evaluating the functional properties of gene sets. Scientific Reports. 4: 4191. PMID 24569707 DOI: 10.1038/Srep04191  0.528
2014 Squires S, Pomerance A, Girvan M, Ott E. Publisher's note: Stability of Boolean networks: The joint effects of topology and update rules [Phys. Rev. e 90, 022814 (2014)] Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 90. DOI: 10.1103/Physreve.90.049905  0.334
2013 Platig J, Ott E, Girvan M. Robustness of network measures to link errors. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 88: 062812. PMID 24483516 DOI: 10.1103/Physreve.88.062812  0.71
2013 Squires S, Sytwu K, Alcala D, Antonsen TM, Ott E, Girvan M. Weakly explosive percolation in directed networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 052127. PMID 23767507 DOI: 10.1103/Physreve.87.052127  0.425
2013 Kiessling TR, Herrera M, Nnetu KD, Balzer EM, Girvan M, Fritsch AW, Martin SS, Käs JA, Losert W. Analysis of multiple physical parameters for mechanical phenotyping of living cells. European Biophysics Journal : Ebj. 42: 383-94. PMID 23504046 DOI: 10.1007/S00249-013-0888-Y  0.7
2012 Chauhan S, Girvan M, Ott E. A network function-based definition of communities in complex networks. Chaos (Woodbury, N.Y.). 22: 033129. PMID 23020468 DOI: 10.1063/1.4745854  0.388
2012 Squires S, Ott E, Girvan M. Dynamical instability in Boolean networks as a percolation problem. Physical Review Letters. 109: 085701. PMID 23002759 DOI: 10.1103/Physrevlett.109.085701  0.409
2012 Pomerance A, Girvan M, Ott E. Stability of Boolean networks with generalized canalizing rules. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 85: 046106. PMID 22680537 DOI: 10.1103/Physreve.85.046106  0.382
2012 Slotterback S, Mailman M, Ronaszegi K, van Hecke M, Girvan M, Losert W. Onset of irreversibility in cyclic shear of granular packings. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 85: 021309. PMID 22463204 DOI: 10.1103/Physreve.85.021309  0.359
2012 Anderson D, Tenzer A, Barlev G, Girvan M, Antonsen TM, Ott E. Multiscale dynamics in communities of phase oscillators. Chaos (Woodbury, N.Y.). 22: 013102. PMID 22462978 DOI: 10.1063/1.3672513  0.316
2012 Glass K, Ott E, Losert W, Girvan M. Implications of functional similarity for gene regulatory interactions. Journal of the Royal Society, Interface / the Royal Society. 9: 1625-36. PMID 22298814 DOI: 10.1098/Rsif.2011.0585  0.569
2012 Chauhan S, Girvan M, Ott E. Erratum: Spectral properties of networks with community structure [Phys. Rev. E80, 056114 (2009)] Physical Review E. 85. DOI: 10.1103/Physreve.85.029906  0.321
2011 Herrera M, McCarthy S, Slotterback S, Cephas E, Losert W, Girvan M. Path to fracture in granular flows: dynamics of contact networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 061303. PMID 21797354 DOI: 10.1103/Physreve.83.061303  0.723
2011 Stout J, Whiteway M, Ott E, Girvan M, Antonsen TM. Local synchronization in complex networks of coupled oscillators. Chaos (Woodbury, N.Y.). 21: 025109. PMID 21721787 DOI: 10.1063/1.3581168  0.403
2010 Barlev G, Girvan M, Ott E. Map model for synchronization of systems of many coupled oscillators. Chaos (Woodbury, N.Y.). 20: 023109. PMID 20590305 DOI: 10.1063/1.3357983  0.365
2010 Peters O, Girvan M. Universality Under Conditions of Self-tuning Journal of Statistical Physics. 141: 53-59. DOI: 10.1007/S10955-010-0039-0  0.307
2009 Chauhan S, Girvan M, Ott E. Spectral properties of networks with community structure. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 056114. PMID 20365050 DOI: 10.1103/Physreve.80.056114  0.341
2009 Pomerance A, Ott E, Girvan M, Losert W. The effect of network topology on the stability of discrete state models of genetic control. Proceedings of the National Academy of Sciences of the United States of America. 106: 8209-14. PMID 19416903 DOI: 10.1073/Pnas.0900142106  0.441
2008 Ott E, Platig JH, Antonsen TM, Girvan M. Echo phenomena in large systems of coupled oscillators. Chaos (Woodbury, N.Y.). 18: 037115. PMID 19045489 DOI: 10.1063/1.2973816  0.68
2008 Antonsen TM, Faghih RT, Girvan M, Ott E, Platig J. External periodic driving of large systems of globally coupled phase oscillators. Chaos (Woodbury, N.Y.). 18: 037112. PMID 19045486 DOI: 10.1063/1.2952447  0.692
2006 Wiley DA, Strogatz SH, Girvan M. The size of the sync basin. Chaos (Woodbury, N.Y.). 16: 015103. PMID 16599769 DOI: 10.1063/1.2165594  0.714
2006 Flack JC, Girvan M, de Waal FB, Krakauer DC. Policing stabilizes construction of social niches in primates. Nature. 439: 426-9. PMID 16437106 DOI: 10.1038/Nature04326  0.343
2004 Newman ME, Girvan M. Finding and evaluating community structure in networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 69: 026113. PMID 14995526 DOI: 10.1103/Physreve.69.026113  0.367
2002 Girvan M, Newman ME. Community structure in social and biological networks. Proceedings of the National Academy of Sciences of the United States of America. 99: 7821-6. PMID 12060727 DOI: 10.1073/Pnas.122653799  0.376
2002 Girvan M, Callaway DS, Newman ME, Strogatz SH. Simple model of epidemics with pathogen mutation. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 031915. PMID 11909117 DOI: 10.1103/Physreve.65.031915  0.635
2001 Jin EM, Girvan M, Newman ME. Structure of growing social networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 64: 046132. PMID 11690115 DOI: 10.1103/Physreve.64.046132  0.364
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