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William R. Harcombe, Ph.D. - Publications

Affiliations: 
2009 Ecology, Evolution, and Behavior University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Evolutionary Biology
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Bisesi AT, Möbius W, Nadell CD, Hansen EG, Bowden SD, Harcombe WR. Bacteriophage specificity is impacted by interactions between bacteria. Msystems. e0117723. PMID 38376179 DOI: 10.1128/msystems.01177-23  0.401
2023 Martinson JNV, Chacón JM, Smith BA, Villarreal AR, Hunter RC, Harcombe WR. Mutualism reduces the severity of gene disruptions in predictable ways across microbial communities. The Isme Journal. PMID 37865718 DOI: 10.1038/s41396-023-01534-6  0.364
2023 Martinson JNV, Chacón JM, Smith BA, Villarreal AR, Hunter RC, Harcombe WR. Mutualism reduces the severity of gene disruptions in predictable ways across microbial communities. Biorxiv : the Preprint Server For Biology. PMID 37214994 DOI: 10.1101/2023.05.08.539835  0.357
2021 Hammarlund SP, Gedeon T, Carlson RP, Harcombe WR. Limitation by a shared mutualist promotes coexistence of multiple competing partners. Nature Communications. 12: 619. PMID 33504808 DOI: 10.1038/s41467-021-20922-0  0.321
2020 Fazzino L, Anisman J, Chacón JM, Harcombe WR. Phage cocktail strategies for the suppression of a pathogen in a cross-feeding coculture. Microbial Biotechnology. PMID 32814365 DOI: 10.1111/1751-7915.13650  0.409
2020 Adamowicz EM, Harcombe WR. Weakest link dynamics predict apparent antibiotic interactions in a model cross-feeding community. Antimicrobial Agents and Chemotherapy. PMID 32778550 DOI: 10.1128/Aac.00465-20  0.377
2020 Adamowicz EM, Muza M, Chacón JM, Harcombe WR. Cross-feeding modulates the rate and mechanism of antibiotic resistance evolution in a model microbial community of Escherichia coli and Salmonella enterica. Plos Pathogens. 16: e1008700. PMID 32687537 DOI: 10.1371/Journal.Ppat.1008700  0.423
2020 Chacón JM, Shaw AK, Harcombe WR. Increasing growth rate slows adaptation when genotypes compete for diffusing resources. Plos Computational Biology. 16: e1007585. PMID 31910213 DOI: 10.1371/Journal.Pcbi.1007585  0.353
2020 Adamowicz EM, Muza M, Chacón JM, Harcombe WR. MICs evolved isolates containing different mutations. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008700.S004  0.322
2019 Fazzino L, Anisman J, Chacón JM, Heineman RH, Harcombe WR. Lytic bacteriophage have diverse indirect effects in a synthetic cross-feeding community. The Isme Journal. PMID 31578469 DOI: 10.1038/S41396-019-0511-Z  0.668
2019 Hammarlund SP, Harcombe WR. Refining the stress gradient hypothesis in a microbial community. Proceedings of the National Academy of Sciences of the United States of America. PMID 31320585 DOI: 10.1073/Pnas.1910420116  0.405
2018 Hammarlund SP, Chacón JM, Harcombe WR. A shared limiting resource leads to competitive exclusion in a cross-feeding system. Environmental Microbiology. PMID 30507059 DOI: 10.1111/1462-2920.14493  0.442
2018 Estrela S, Libby E, Van Cleve J, Débarre F, Deforet M, Harcombe WR, Peña J, Brown SP, Hochberg ME. Environmentally Mediated Social Dilemmas. Trends in Ecology & Evolution. PMID 30415827 DOI: 10.1016/J.Tree.2018.10.004  0.509
2018 Harcombe WR, Chacón JM, Adamowicz EM, Chubiz LM, Marx CJ. Evolution of bidirectional costly mutualism from byproduct consumption. Proceedings of the National Academy of Sciences of the United States of America. PMID 30348787 DOI: 10.1073/Pnas.1810949115  0.416
2018 Adamowicz EM, Flynn J, Hunter RC, Harcombe WR. Cross-feeding modulates antibiotic tolerance in bacterial communities. The Isme Journal. PMID 29991761 DOI: 10.1038/S41396-018-0212-Z  0.427
2018 Carlson RP, Beck AE, Phalak P, Fields MW, Gedeon T, Hanley L, Harcombe WR, Henson MA, Heys JJ. Competitive resource allocation to metabolic pathways contributes to overflow metabolisms and emergent properties in cross-feeding microbial consortia. Biochemical Society Transactions. PMID 29472366 DOI: 10.1042/Bst20170242  0.372
2018 Chacón JM, Möbius W, Harcombe WR. The spatial and metabolic basis of colony size variation. The Isme Journal. PMID 29367665 DOI: 10.1038/S41396-017-0038-0  0.376
2018 Hynes WF, Chacón J, Segrè D, Marx CJ, Cady NC, Harcombe WR. Bioprinting microbial communities to examine interspecies interactions in time and space Biomedical Physics & Engineering Express. 4: 055010. DOI: 10.1088/2057-1976/Aad544  0.41
2017 Douglas SM, Chubiz LM, Harcombe WR, Marx CJ. Identification of the potentiating mutations and synergistic epistasis that enabled the evolution of inter-species cooperation. Plos One. 12: e0174345. PMID 28493869 DOI: 10.1371/Journal.Pone.0174345  0.391
2016 Chacón JM, Harcombe WR. Antimicrobials: Constraints on microbial warfare. Nature Microbiology. 1: 16225. PMID 27886193 DOI: 10.1038/Nmicrobiol.2016.225  0.332
2016 Douglas SM, Chubiz LM, Harcombe WR, Ytreberg FM, Marx CJ. Parallel Mutations Result in a Wide Range of Cooperation and Community Consequences in a Two-Species Bacterial Consortium. Plos One. 11: e0161837. PMID 27617746 DOI: 10.1371/Journal.Pone.0161837  0.437
2016 Harcombe WR, Betts A, Shapiro JW, Marx CJ. Adding Biotic Complexity Alters the Metabolic Benefits of Mutualism. Evolution; International Journal of Organic Evolution. PMID 27272242 DOI: 10.1111/Evo.12973  0.375
2015 Chubiz LM, Granger BR, Segrè D, Harcombe WR. Species interactions differ in their genetic robustness. Frontiers in Microbiology. 6: 271. PMID 25926820 DOI: 10.3389/Fmicb.2015.00271  0.476
2014 Chubiz L, Douglas S, Harcombe W. Combining engineering and evolution to create novel metabolic mutualisms between species Methods in Molecular Biology. 1151: 39-47. PMID 24838877 DOI: 10.1007/978-1-4939-0554-6_3  0.41
2014 Harcombe WR, Riehl WJ, Dukovski I, Granger BR, Betts A, Lang AH, Bonilla G, Kar A, Leiby N, Mehta P, Marx CJ, Segrè D. Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics. Cell Reports. 7: 1104-15. PMID 24794435 DOI: 10.1016/J.Celrep.2014.03.070  0.439
2014 Plucain J, Hindré T, Le Gac M, Tenaillon O, Cruveiller S, Médigue C, Leiby N, Harcombe WR, Marx CJ, Lenski RE, Schneider D. Epistasis and allele specificity in the emergence of a stable polymorphism in Escherichia coli. Science (New York, N.Y.). 343: 1366-9. PMID 24603152 DOI: 10.1126/Science.1248688  0.362
2013 Harcombe WR, Delaney NF, Leiby N, Klitgord N, Marx CJ. The ability of flux balance analysis to predict evolution of central metabolism scales with the initial distance to the optimum. Plos Computational Biology. 9: e1003091. PMID 23818838 DOI: 10.1371/Journal.Pcbi.1003091  0.316
2012 Leiby N, Harcombe WR, Marx CJ. Multiple long-term, experimentally-evolved populations of Escherichia coli acquire dependence upon citrate as an iron chelator for optimal growth on glucose. Bmc Evolutionary Biology. 12: 151. PMID 22909317 DOI: 10.1186/1471-2148-12-151  0.332
2011 Hillesland KL, Stahl DA, Harcombe W. Measuring the costs of microbial mutualism Microbe. 6: 427-434. DOI: 10.1128/Microbe.6.427.1  0.388
2010 Harcombe W. Novel cooperation experimentally evolved between species Evolution. 64: 2166-2172. PMID 20100214 DOI: 10.1111/J.1558-5646.2010.00959.X  0.419
2009 Harcombe WR, Springman R, Bull JJ. Compensatory evolution for a gene deletion is not limited to its immediate functional network. Bmc Evolutionary Biology. 9: 106. PMID 19445716 DOI: 10.1186/1471-2148-9-106  0.521
2009 Bull JJ, Harcombe WR. Population dynamics constrain the cooperative evolution of cross-feeding. Plos One. 4: e4115. PMID 19127304 DOI: 10.1371/Journal.Pone.0004115  0.561
2008 Cowperthwaite MC, Economo EP, Harcombe WR, Miller EL, Meyers LA. The ascent of the abundant: how mutational networks constrain evolution. Plos Computational Biology. 4: e1000110. PMID 18636097 DOI: 10.1371/Journal.Pcbi.1000110  0.341
2007 Pfennig DW, Harper GR, Brumo AF, Harcombe WR, Pfennig KS. Population differences in predation on Batesian mimics in allopatry with their model: Selection against mimics is strongest when they are common Behavioral Ecology and Sociobiology. 61: 505-511. DOI: 10.1007/S00265-006-0278-X  0.58
2005 Harcombe WR, Bull JJ. Impact of phages on two-species bacterial communities. Applied and Environmental Microbiology. 71: 5254-9. PMID 16151111 DOI: 10.1128/Aem.71.9.5254-5259.2005  0.584
2001 Pfennig DW, Harcombe WR, Pfennig KS. Frequency-dependent Batesian mimicry. Nature. 410: 323. PMID 11268195 DOI: 10.1038/35066628  0.495
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