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Melike Lakadamyali, Ph.D. - Publications

Affiliations: 
2006 Harvard University, Cambridge, MA, United States 
Area:
single-molecule approaches to examine protein-RNA complexes
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Lakadamyali M, Cosma MP. Visualizing the genome in high resolution challenges our textbook understanding. Nature Methods. PMID 32123395 DOI: 10.1038/S41592-020-0758-3  0.318
2019 Poleshko A, Smith CL, Nguyen SC, Sivaramakrishnan P, Wong KG, Murray JI, Lakadamyali M, Joyce EF, Jain R, Epstein JA. H3K9me2 orchestrates inheritance of spatial positioning of peripheral heterochromatin through mitosis. Elife. 8. PMID 31573510 DOI: 10.7554/Elife.49278  0.31
2019 Cella Zanacchi F, Manzo C, Magrassi R, Derr ND, Lakadamyali M. Quantifying Protein Copy Number in Super-Resolution Using an Imaging-Invariant Calibration. Biophysical Journal. PMID 31103226 DOI: 10.1016/J.Bpj.2019.04.026  0.362
2019 Cutrale F, Rodriguez D, Hortigüela V, Chiu CL, Otterstrom J, Mieruszynski S, Seriola A, Larrañaga E, Raya A, Lakadamyali M, Fraser SE, Martinez E, Ojosnegros S. Using enhanced number and brightness to measure protein oligomerization dynamics in live cells. Nature Protocols. PMID 30675035 DOI: 10.1038/S41596-018-0111-9  0.349
2018 Mohan N, Sorokina EM, Verdeny IV, Alvarez AS, Lakadamyali M. Detyrosinated microtubules spatially constrain lysosomes facilitating lysosome-autophagosome fusion. The Journal of Cell Biology. PMID 30567713 DOI: 10.1083/Jcb.201807124  0.336
2018 Gómez-García PA, Garbacik ET, Otterstrom JJ, Garcia-Parajo MF, Lakadamyali M. Excitation-multiplexed multicolor superresolution imaging with fm-STORM and fm-DNA-PAINT. Proceedings of the National Academy of Sciences of the United States of America. 115: 12991-12996. PMID 30509979 DOI: 10.1073/Pnas.1804725115  0.336
2017 Neguembor MV, Sebastian-Perez R, Aulicino F, Gomez-Garcia PA, Cosma MP, Lakadamyali M. (Po)STAC (Polycistronic SunTAg modified CRISPR) enables live-cell and fixed-cell super-resolution imaging of multiple genes. Nucleic Acids Research. PMID 29294098 DOI: 10.1093/Nar/Gkx1271  0.391
2017 Ojosnegros S, Cutrale F, Rodríguez D, Otterstrom JJ, Chiu CL, Hortigüela V, Tarantino C, Seriola A, Mieruszynski S, Martínez E, Lakadamyali M, Raya A, Fraser SE. Eph-ephrin signaling modulated by polymerization and condensation of receptors. Proceedings of the National Academy of Sciences of the United States of America. 114: 13188-13193. PMID 29192024 DOI: 10.1073/Pnas.1713564114  0.341
2017 Ricci MA, Cosma MP, Lakadamyali M. Super resolution imaging of chromatin in pluripotency, differentiation, and reprogramming. Current Opinion in Genetics & Development. 46: 186-193. PMID 28843811 DOI: 10.1016/J.Gde.2017.07.010  0.32
2017 Kieffer-Kwon KR, Nimura K, Rao SSP, Xu J, Jung S, Pekowska A, Dose M, Stevens E, Mathe E, Dong P, Huang SC, Ricci MA, Baranello L, Zheng Y, Ardori FT, ... ... Lakadamyali M, et al. Myc Regulates Chromatin Decompaction and Nuclear Architecture during B Cell Activation. Molecular Cell. PMID 28803781 DOI: 10.1016/J.Molcel.2017.07.013  0.305
2017 Zanacchi FC, Manzo C, Alvarez AS, Derr ND, Garcia-Parajo MF, Lakadamyali M. A DNA origami platform for quantifying protein copy number in super-resolution. Nature Methods. PMID 28650478 DOI: 10.1038/Nmeth.4342  0.335
2017 Verdeny-Vilanova I, Wehnekamp F, Mohan N, Álvarez ÁS, Borbely JS, Otterstrom JJ, Lamb DC, Lakadamyali M. 3D motion of vesicles along microtubules helps them to circumvent obstacles in cells. Journal of Cell Science. PMID 28420672 DOI: 10.1242/Jcs.201178  0.311
2017 Cella Zanacchi F, Manzo C, Sandoval Alvarez A, Derr ND, Garcia Parajo M, Lakadamyali M. Versatile Super-Resolution Calibration Standard for Quantifying Protein Copy Number Biophysical Journal. 112: 142a. DOI: 10.1016/J.Bpj.2016.11.782  0.324
2016 Mannelli I, Reigada R, Suárez I, Janner D, Carrilero A, Mazumder P, Sagués F, Pruneri V, Lakadamyali M. Functionalized Surfaces with Tailored Wettability Determine Influenza A Infectivity. Acs Applied Materials & Interfaces. PMID 27243266 DOI: 10.1021/Acsami.6B02779  0.34
2016 Torreno-Pina JA, Manzo C, Salio M, Aichinger MC, Oddone A, Lakadamyali M, Shepherd D, Besra GS, Cerundolo V, Garcia-Parajo MF. The actin cytoskeleton modulates the activation of iNKT cells by segregating CD1d nanoclusters on antigen-presenting cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 26798067 DOI: 10.1073/Pnas.1514530113  0.337
2016 Lakadamyali M. Correlative Imaging of Intracellular Transport Processes at High Resolution Biophysical Journal. 110: 521a. DOI: 10.1016/J.Bpj.2015.11.2787  0.351
2016 Verdeny Vilanova I, Wehnekamp F, Mohan N, Sandoval Álvarez Á, Borbely J, Otterstrom J, Lamb D, Lakadamyali M. Unravelling 3D Cargo Transport Dynamics at the Microtubule Network Biophysical Journal. 110: 15a. DOI: 10.1016/J.Bpj.2015.11.141  0.331
2015 Lakadamyali M, Cosma MP. Advanced microscopy methods for visualizing chromatin structure. Febs Letters. PMID 25896023 DOI: 10.1016/J.Febslet.2015.04.012  0.338
2015 Borbely J, Otterstrom J, Mohan N, Manzo C, Lakadamyali M. Quantitative high spatiotemporal imaging of biological processes Proceedings of Spie - the International Society For Optical Engineering. 9554. DOI: 10.1117/12.2190263  0.374
2014 Tam J, Cordier GA, Bálint Š, Sandoval Álvarez Á, Borbely JS, Lakadamyali M. A microfluidic platform for correlative live-cell and super-resolution microscopy. Plos One. 9: e115512. PMID 25545548 DOI: 10.1371/Journal.Pone.0115512  0.389
2014 Tam J, Cordier GA, Borbely JS, Sandoval Álvarez A, Lakadamyali M. Cross-talk-free multi-color STORM imaging using a single fluorophore. Plos One. 9: e101772. PMID 25000286 DOI: 10.1371/Journal.Pone.0101772  0.321
2014 Durisic N, Cuervo LL, Lakadamyali M. Quantitative super-resolution microscopy: pitfalls and strategies for image analysis. Current Opinion in Chemical Biology. 20: 22-8. PMID 24793374 DOI: 10.1016/J.Cbpa.2014.04.005  0.345
2014 Oddone A, Vilanova IV, Tam J, Lakadamyali M. Super-resolution imaging with stochastic single-molecule localization: concepts, technical developments, and biological applications. Microscopy Research and Technique. 77: 502-9. PMID 24616244 DOI: 10.1002/Jemt.22346  0.315
2014 Lakadamyali M. Navigating the cell: how motors overcome roadblocks and traffic jams to efficiently transport cargo. Physical Chemistry Chemical Physics : Pccp. 16: 5907-16. PMID 24557020 DOI: 10.1039/C3Cp55271C  0.302
2014 Durisic N, Laparra-Cuervo L, Sandoval-Álvarez A, Borbely JS, Lakadamyali M. Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate. Nature Methods. 11: 156-62. PMID 24390439 DOI: 10.1038/Nmeth.2784  0.323
2014 Lakadamyali M. Super-resolution microscopy: going live and going fast. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 630-6. PMID 24166886 DOI: 10.1002/Cphc.201300720  0.357
2014 Lakadamyali M. Quantitativesuper-Resolution Imaging of Biological Processes with High Spatiotemporalresoltuion Biophysical Journal. 106: 7a. DOI: 10.1016/J.Bpj.2013.11.083  0.373
2013 Cambi A, Lakadamyali M, Lidke DS, Garcia-Parajo MF. Meeting report--Visualizing signaling nanoplatforms at a higher spatiotemporal resolution. Journal of Cell Science. 126: 3817-21. PMID 23995382 DOI: 10.1242/Jcs.137901  0.329
2013 Bálint Š, Verdeny Vilanova I, Sandoval Álvarez Á, Lakadamyali M. Correlative live-cell and superresolution microscopy reveals cargo transport dynamics at microtubule intersections. Proceedings of the National Academy of Sciences of the United States of America. 110: 3375-80. PMID 23401534 DOI: 10.1073/Pnas.1219206110  0.325
2013 Durisic N, Laparra-Cuervo L, Sandoval A, Lakadamyali M. Effects of Photoactivation Efficiency on Single Molecule Counting in PALM Biophysical Journal. 104: 525a. DOI: 10.1016/J.Bpj.2012.11.2903  0.339
2012 Lakadamyali M, Babcock H, Bates M, Zhuang X, Lichtman J. 3D multicolor super-resolution imaging offers improved accuracy in neuron tracing. Plos One. 7: e30826. PMID 22292051 DOI: 10.1371/Journal.Pone.0030826  0.501
2012 Brede N, Lakadamyali M. GraspJ: An open source, real-time analysis package for super-resolution imaging Optical Nanoscopy. 1: 1-7. DOI: 10.1186/2192-2853-1-11  0.342
2012 Balint S, Brede N, Lakadamyali M. Correlative Real-Time and Super Resolution Imaging of Mitochondrial Dynamics Biophysical Journal. 102: 379a. DOI: 10.1016/J.Bpj.2011.11.2072  0.35
2011 Rust MJ, Lakadamyali M, Brandenburg B, Zhuang X. Single-virus tracking in live cells. Cold Spring Harbor Protocols. 2011. PMID 21880811 DOI: 10.1101/Pdb.Top065623  0.712
2011 Rust MJ, Lakadamyali M, Brandenburg B, Zhuang X. Single-particle virus tracking. Cold Spring Harbor Protocols. 2011. PMID 21880810 DOI: 10.1101/Pdb.Prot065631  0.681
2010 Lakadamyali M, Bates M, Babcock H, Lichtman J, Zhuang X. Mapping Neuronal Connectivity Using Stochastic Optical Reconstruction Microscopy (Storm): The Brainstorm Project Biophysical Journal. 98: 214a. DOI: 10.1016/J.Bpj.2009.12.1153  0.45
2007 Brandenburg B, Lee LY, Lakadamyali M, Rust MJ, Zhuang X, Hogle JM. Imaging poliovirus entry in live cells. Plos Biology. 5: e183. PMID 17622193 DOI: 10.1371/Journal.Pbio.0050183  0.694
2006 Lakadamyali M, Rust MJ, Zhuang X. Ligands for clathrin-mediated endocytosis are differentially sorted into distinct populations of early endosomes. Cell. 124: 997-1009. PMID 16530046 DOI: 10.1016/J.Cell.2005.12.038  0.652
2004 Patolsky F, Zheng G, Hayden O, Lakadamyali M, Zhuang X, Lieber CM. Electrical detection of single viruses. Proceedings of the National Academy of Sciences of the United States of America. 101: 14017-22. PMID 15365183 DOI: 10.1073/Pnas.0406159101  0.525
2004 Lakadamyali M, Rust MJ, Zhuang X. Endocytosis of influenza viruses. Microbes and Infection / Institut Pasteur. 6: 929-36. PMID 15310470 DOI: 10.1016/J.Micinf.2004.05.002  0.692
2004 Rust MJ, Lakadamyali M, Zhang F, Zhuang X. Assembly of endocytic machinery around individual influenza viruses during viral entry. Nature Structural & Molecular Biology. 11: 567-73. PMID 15122347 DOI: 10.1038/Nsmb769  0.699
2003 Lakadamyali M, Rust MJ, Babcock HP, Zhuang X. Visualizing infection of individual influenza viruses. Proceedings of the National Academy of Sciences of the United States of America. 100: 9280-5. PMID 12883000 DOI: 10.1073/Pnas.0832269100  0.697
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