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Yinan Wei, Ph.D. - Publications

Affiliations: 
University of Kentucky, Lexington, KY 
 2003 Princeton University, Princeton, NJ 
Area:
Synthetic Biology and Alzheimer's Disease
Website:
https://chem.as.uky.edu/users/ywei5
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Thokkadam AM, Rajapaksha P, Tu Y, Kumar M, Wei Y. Purification of an Engineered Membrane Protein FhuA for Size-Dependent Separation Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.1883  0.319
2018 Cai Y, Wilkop T, Wei Y. Data on spectrum-based fluorescence resonance energy transfer measurement of multidrug transporter AcrB. Data in Brief. 21: 1649-1653. PMID 30505894 DOI: 10.1016/J.Dib.2018.10.155  0.336
2018 Wang Z, Lu W, Rajapaksha P, Wilkop T, Cai Y, Wei Y. Comparison of in vitro and in vivo oligomeric states of a wild type and mutant trimeric inner membrane multidrug transporter. Biochemistry and Biophysics Reports. 16: 122-129. PMID 30417130 DOI: 10.1016/J.Bbrep.2018.10.006  0.335
2018 Abeywansha T, Chai Q, Zhang X, Wang Z, Wei Y. Accessibility from the cytoplasm is critical for ssrA tag mediated degradation of integral membrane proteins by ClpXP protease. Biochemistry. PMID 30169015 DOI: 10.1021/Acs.Biochem.8B00641  0.428
2017 Zhang X, Lu W, Kwan K, Bhattacharyya D, Wei Y. Dual-Functional-Tag-Facilitated Protein Labeling and Immobilization. Acs Omega. 2: 522-528. PMID 30023610 DOI: 10.1021/acsomega.6b00512  0.377
2016 Chai Q, Webb SR, Wang Z, Dutch RE, Wei Y. Study of the degradation of a multidrug transporter using a non-radioactive pulse chase method. Analytical and Bioanalytical Chemistry. PMID 27549795 DOI: 10.1007/S00216-016-9871-7  0.396
2016 Chai Q, Wang Z, Webb SR, Dutch RE, Wei Y. The ssrA-tag facilitated degradation of an integral membrane protein. Biochemistry. PMID 27078234 DOI: 10.1021/Acs.Biochem.6B00038  0.421
2015 Wang Z, Ye C, Zhang X, Wei Y. Cysteine residue is not essential for CPM protein thermal-stability assay. Analytical and Bioanalytical Chemistry. 407: 3683-91. PMID 25772562 DOI: 10.1007/S00216-015-8587-4  0.412
2015 Gajadeera CS, Zhang X, Wei Y, Tsodikov OV. Structure of inorganic pyrophosphatase from Staphylococcus aureus reveals conformational flexibility of the active site. Journal of Structural Biology. 189: 81-6. PMID 25576794 DOI: 10.1016/J.Jsb.2014.12.003  0.303
2014 Ye C, Wang Z, Lu W, Zhong M, Chai Q, Wei Y. Correlation between AcrB trimer association affinity and efflux activity. Biochemistry. 53: 3738-46. PMID 24854514 DOI: 10.1021/Bi5000838  0.446
2014 Ye C, Wang Z, Lu W, Wei Y. Unfolding study of a trimeric membrane protein AcrB. Protein Science : a Publication of the Protein Society. 23: 897-905. PMID 24715637 DOI: 10.1002/Pro.2471  0.396
2014 Chai Q, Ferrell B, Zhong M, Zhang X, Ye C, Wei Y. Diverse sequences are functional at the C-terminus of the E. coli periplasmic chaperone SurA. Protein Engineering, Design & Selection : Peds. 27: 111-6. PMID 24586054 DOI: 10.1093/Protein/Gzu003  0.401
2014 Lu W, Zhong M, Chai Q, Wang Z, Yu L, Wei Y. Functional relevance of AcrB Trimerization in pump assembly and substrate binding. Plos One. 9: e89143. PMID 24551234 DOI: 10.1371/Journal.Pone.0089143  0.327
2013 Yu L, Lu W, Ye C, Wang Z, Zhong M, Chai Q, Sheetz M, Wei Y. Role of a conserved residue R780 in Escherichia coli multidrug transporter AcrB. Biochemistry. 52: 6790-6. PMID 24007302 DOI: 10.1021/Bi400452V  0.397
2013 Zhong M, Ferrell B, Lu W, Chai Q, Wei Y. Insights into the function and structural flexibility of the periplasmic molecular chaperone SurA. Journal of Bacteriology. 195: 1061-7. PMID 23275244 DOI: 10.1128/Jb.01143-12  0.43
2013 Ye C, Chai Q, Zhong M, Wei Y. Effect of crowding by Ficolls on OmpA and OmpT refolding and membrane insertion. Protein Science : a Publication of the Protein Society. 22: 239-45. PMID 23225740 DOI: 10.1002/Pro.2205  0.3
2013 Fang J, Yu L, Wu M, Wei Y. Dissecting the function of a protruding loop in AcrB trimerization. Journal of Biomolecular Structure & Dynamics. 31: 385-92. PMID 22877148 DOI: 10.1080/07391102.2012.703065  0.388
2012 Lu W, Chai Q, Zhong M, Yu L, Fang J, Wang T, Li H, Zhu H, Wei Y. Assembling of AcrB trimer in cell membrane. Journal of Molecular Biology. 423: 123-34. PMID 22766312 DOI: 10.1016/J.Jmb.2012.06.036  0.36
2012 Yewle JN, Wei Y, Puleo DA, Daunert S, Bachas LG. Oriented immobilization of proteins on hydroxyapatite surface using bifunctional bisphosphonates as linkers. Biomacromolecules. 13: 1742-9. PMID 22559170 DOI: 10.1021/Bm201865R  0.701
2012 Geng S, Fang J, Turner KB, Daunert S, Wei Y. Accumulation and efflux of polychlorinated biphenyls in Escherichia coli. Analytical and Bioanalytical Chemistry. 403: 2403-9. PMID 22349406 DOI: 10.1007/S00216-012-5835-8  0.596
2011 Yu L, Lu W, Wei Y. AcrB trimer stability and efflux activity, insight from mutagenesis studies. Plos One. 6: e28390. PMID 22163011 DOI: 10.1371/Journal.Pone.0028390  0.412
2011 Lu W, Zhong M, Wei Y. Folding of AcrB Subunit Precedes Trimerization. Journal of Molecular Biology. 411: 264-74. PMID 21664361 DOI: 10.1016/J.Jmb.2011.05.042  0.337
2011 Lu W, Zhong M, Wei Y. A reporter platform for the monitoring of in vivo conformational changes in AcrB. Protein and Peptide Letters. 18: 863-71. PMID 21529338 DOI: 10.2174/092986611796011446  0.346
2011 Fang J, Zhang X, Cai Y, Wei Y. Small globular protein motif forms particulate hydrogel under various pH conditions. Biomacromolecules. 12: 1578-84. PMID 21413697 DOI: 10.1021/Bm101571R  0.428
2011 Das A, Wei Y, Pelczer I, Hecht MH. Binding of small molecules to cavity forming mutants of a de novo designed protein. Protein Science : a Publication of the Protein Society. 20: 702-11. PMID 21328630 DOI: 10.1002/Pro.601  0.69
2011 Fang J, Wei Y. Expression, purification and characterization of the Escherichia coli integral membrane protein YajC. Protein and Peptide Letters. 18: 601-8. PMID 21235483 DOI: 10.2174/092986611795222713  0.428
2010 Zhong M, Fang J, Wei Y. Site specific and reversible protein immobilization facilitated by a DNA binding fusion tag. Bioconjugate Chemistry. 21: 1177-82. PMID 20583781 DOI: 10.1021/Bc9005392  0.42
2010 Wei Y, Daunert S. Enabling technologies in discovery: the 2009 Nobel Prize and its implications in antibiotic design. Analytical and Bioanalytical Chemistry. 396: 1623-6. PMID 20127083 DOI: 10.1007/S00216-009-3427-Z  0.333
2010 Fang J, Yu L, Gao P, Cai Y, Wei Y. Detection of protein-DNA interaction and regulation using gold nanoparticles. Analytical Biochemistry. 399: 262-7. PMID 19917263 DOI: 10.1016/J.Ab.2009.11.013  0.349
2009 Ehrick JD, Luckett MR, Khatwani S, Wei Y, Deo SK, Bachas LG, Daunert S. Glucose responsive hydrogel networks based on protein recognition. Macromolecular Bioscience. 9: 864-8. PMID 19434674 DOI: 10.1002/Mabi.200800337  0.521
2009 Ehrick JD, Luckett MR, Khatwani S, Wei Y, Deo SK, Bachas LG, Daunert S. Macromol. Biosci. 9/2009 Macromolecular Bioscience. 9: NA-NA. DOI: 10.1002/Mabi.200990017  0.519
2007 Hastings JT, Guo J, Keathley PD, Kumaresh PB, Wei Y, Law S, Bachas LG. Optimal self-referenced sensing using long- and short- range surface plasmons. Optics Express. 15: 17661-72. PMID 19551062 DOI: 10.1364/Oe.15.017661  0.51
2007 Bradley LH, Wei Y, Thumfort P, Wurth C, Hecht MH. Protein design by binary patterning of polar and nonpolar amino acids. Methods in Molecular Biology (Clifton, N.J.). 352: 155-66. PMID 17041264 DOI: 10.1385/1-59745-187-8:155  0.769
2005 Klepeis JL, Wei Y, Hecht MH, Floudas CA. Ab initio prediction of the three-dimensional structure of a de novo designed protein: a double-blind case study. Proteins. 58: 560-70. PMID 15609306 DOI: 10.1002/Prot.20338  0.646
2004 Hecht MH, Das A, Go A, Bradley LH, Wei Y. De novo proteins from designed combinatorial libraries. Protein Science : a Publication of the Protein Society. 13: 1711-23. PMID 15215517 DOI: 10.1110/Ps.04690804  0.745
2004 Wei Y, Hecht MH. Enzyme-like proteins from an unselected library of designed amino acid sequences. Protein Engineering, Design & Selection : Peds. 17: 67-75. PMID 14985539 DOI: 10.1093/Protein/Gzh007  0.678
2003 Wei Y, Kim S, Fela D, Baum J, Hecht MH. Solution structure of a de novo protein from a designed combinatorial library. Proceedings of the National Academy of Sciences of the United States of America. 100: 13270-3. PMID 14593201 DOI: 10.1073/Pnas.1835644100  0.667
2003 Wei Y, Fela D, Kim S, Hecht M, Baum J. 1H, 13C and 15N resonance assignments of S-824, a de novo four-helix bundle from a designed combinatorial library. Journal of Biomolecular Nmr. 27: 395-6. PMID 14512738 DOI: 10.1023/A:1025842221022  0.51
2003 Wei Y, Liu T, Sazinsky SL, Moffet DA, Pelczer I, Hecht MH. Stably folded de novo proteins from a designed combinatorial library. Protein Science : a Publication of the Protein Society. 12: 92-102. PMID 12493832 DOI: 10.1110/Ps.0228003  0.783
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