| Year |
Citation |
Score |
| 2024 |
Wang J, Kan S, Kong J, Nie L, Fan W, Ren Y, Reeve W, Mower JP, Wu Z. Accumulation of large lineage-specific repeats coincides with sequence acceleration and structural rearrangement in Plantago plastomes. Genome Biology and Evolution. PMID 39190481 DOI: 10.1093/gbe/evae177 |
0.528 |
|
| 2024 |
Feng X, Zheng J, Irisarri I, Yu H, Zheng B, Ali Z, de Vries S, Keller J, Fürst-Jansen JMR, Dadras A, Zegers JMS, Rieseberg TP, Dhabalia Ashok A, Darienko T, Bierenbroodspot MJ, ... ... Mower JP, et al. Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature Genetics. PMID 38693345 DOI: 10.1038/s41588-024-01737-3 |
0.391 |
|
| 2024 |
Zhou S, Ma K, Mower JP, Liu Y, Zhou R. Leaf variegation caused by plastome structural variation: an example from . Horticulture Research. 11: uhae009. PMID 38464478 DOI: 10.1093/hr/uhae009 |
0.4 |
|
| 2024 |
Zwonitzer KD, Tressel LG, Wu Z, Kan S, Broz AK, Mower JP, Ruhlman TA, Jansen RK, Sloan DB, Havird JC. Genome copy number predicts extreme evolutionary rate variation in plant mitochondrial DNA. Proceedings of the National Academy of Sciences of the United States of America. 121: e2317240121. PMID 38427600 DOI: 10.1073/pnas.2317240121 |
0.655 |
|
| 2023 |
Liang H, Mower JP, Chia CP. Functional Prokaryotic-Like Deoxycytidine Triphosphate Deaminases and Thymidylate Synthase in Eukaryotic Social Amoebae: Vertical, Endosymbiotic, or Horizontal Gene Transfer? Molecular Biology and Evolution. 40. PMID 38064674 DOI: 10.1093/molbev/msad268 |
0.315 |
|
| 2023 |
Jin X, Du H, Zhu C, Wan H, Liu F, Ruan J, Mower JP, Zhu A. Haplotype-resolved genomes of wild octoploid progenitors illuminate genomic diversifications from wild relatives to cultivated strawberry. Nature Plants. PMID 37537397 DOI: 10.1038/s41477-023-01473-2 |
0.436 |
|
| 2023 |
Yu R, Chen X, Long L, Jost M, Zhao R, Liu L, Mower JP, dePamphilis CW, Wanke S, Jiao Y. De novo assembly and comparative analyses of mitochondrial genomes in Piperales. Genome Biology and Evolution. PMID 36896589 DOI: 10.1093/gbe/evad041 |
0.513 |
|
| 2023 |
Feng X, Zheng J, Irisarri I, Yu H, Zheng B, Ali Z, de Vries S, Keller J, Fürst-Jansen JMR, Dadras A, Zegers JMS, Rieseberg TP, Ashok AD, Darienko T, Bierenbroodspot MJ, ... ... Mower JP, et al. Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Biorxiv : the Preprint Server For Biology. PMID 36778228 DOI: 10.1101/2023.01.31.526407 |
0.386 |
|
| 2022 |
Fan W, Liu F, Jia Q, Du H, Chen W, Ruan J, Lei J, Li DZ, Mower JP, Zhu A. Fragaria mitogenomes evolve rapidly in structure but slowly in sequence and incur frequent multinucleotide mutations mediated by micro-inversions. The New Phytologist. PMID 35731093 DOI: 10.1111/nph.18334 |
0.485 |
|
| 2022 |
Qu XJ, Zhang XJ, Cao DL, Guo XX, Mower JP, Fan SJ. Plastid and mitochondrial phylogenomics reveal correlated substitution rate variation in Koenigia (Polygonoideae, Polygonaceae) and a reduced plastome for Koenigia delicatula including loss of all ndh genes. Molecular Phylogenetics and Evolution. 174: 107544. PMID 35690375 DOI: 10.1016/j.ympev.2022.107544 |
0.543 |
|
| 2022 |
Yu H, Li M, Sandhu J, Sun G, Schnable JC, Walia H, Xie W, Yu B, Mower JP, Zhang C. Pervasive misannotation of microexons that are evolutionarily conserved and crucial for gene function in plants. Nature Communications. 13: 820. PMID 35145097 DOI: 10.1038/s41467-022-28449-8 |
0.479 |
|
| 2021 |
Mower JP, Hanley L, Wolff K, Pabón-Mora N, González F. Complete Mitogenomes of Two Species and Phylogeny of Plantagineae (Plantaginaceae, Lamiales) Using Mitochondrial Genes and the Nuclear Ribosomal RNA Repeat. Plants (Basel, Switzerland). 10. PMID 34961143 DOI: 10.3390/plants10122673 |
0.472 |
|
| 2021 |
Yu R, Sun C, Zhong Y, Liu Y, Sanchez-Puerta MV, Mower JP, Zhou R. The minicircular and extremely heteroplasmic mitogenome of the holoparasitic plant Rhopalocnemis phalloides. Current Biology : Cb. PMID 34906352 DOI: 10.1016/j.cub.2021.11.053 |
0.456 |
|
| 2021 |
Mower JP, Guo W, Partha R, Fan W, Levsen N, Wolff K, Nugent JM, Pabón-Mora N, González F. Plastomes from tribe Plantagineae (Plantaginaceae) reveal infrageneric structural synapormorphies and localized hypermutation for Plantago and functional loss of ndh genes from Littorella. Molecular Phylogenetics and Evolution. 107217. PMID 34082129 DOI: 10.1016/j.ympev.2021.107217 |
0.45 |
|
| 2020 |
Kolli R, Engstler C, Akbas S, Mower JP, Soll J, Carrie C. The OXA2a Insertase of Arabidopsis Is Required for Cytochrome c Maturation. Plant Physiology. PMID 32759271 DOI: 10.1104/Pp.19.01248 |
0.31 |
|
| 2020 |
Liu F, Fan W, Yang JB, Xiang CL, Mower JP, Li DZ, Zhu A. Episodic and GC-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes. The New Phytologist. PMID 32558926 DOI: 10.1111/Nph.16753 |
0.619 |
|
| 2020 |
Mower JP. Variation in protein gene and intron content among land plant mitogenomes. Mitochondrion. 53: 203-213. PMID 32535166 DOI: 10.1016/J.Mito.2020.06.002 |
0.594 |
|
| 2020 |
Orton LM, Fitzek E, Feng X, Grayburn WS, Mower JP, Liu K, Zhang C, Duvall MR, Yin Y. Zygnema circumcarinatum UTEX 1559 chloroplast and mitochondrial genomes provide insight into land plant evolution. Journal of Experimental Botany. PMID 32206790 DOI: 10.1093/Jxb/Eraa149 |
0.629 |
|
| 2020 |
Guo W, Zhu A, Fan W, Adams RP, Mower JP. Extensive shifts from cis to trans splicing of gymnosperm mitochondrial introns. Molecular Biology and Evolution. PMID 32027368 DOI: 10.1093/Molbev/Msaa029 |
0.606 |
|
| 2019 |
Hall ND, Zhang H, Mower JP, McElroy JS, Goertzen LR. The Mitochondrial Genome of Eleusine indica and Characterization of Gene Content Within Poaceae. Genome Biology and Evolution. PMID 31665327 DOI: 10.1093/Gbe/Evz229 |
0.66 |
|
| 2019 |
Li Z, Vickrey TL, McNally MG, Sato SJ, Clemente TE, Mower JP. Assessing Anthocyanin Biosynthesis in Solanaceae as a Model Pathway for Secondary Metabolism. Genes. 10. PMID 31349565 DOI: 10.3390/Genes10080559 |
0.437 |
|
| 2019 |
Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, ... ... Mower JP, et al. Author Correction: Origin and evolution of the octoploid strawberry genome. Nature Genetics. PMID 30842601 DOI: 10.1038/S41588-019-0380-4 |
0.36 |
|
| 2019 |
Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, ... ... Mower JP, et al. Origin and evolution of the octoploid strawberry genome. Nature Genetics. PMID 30804557 DOI: 10.1038/S41588-019-0356-4 |
0.482 |
|
| 2018 |
Fan W, Guo W, Funk L, Mower JP, Zhu A. Complete loss of RNA editing from the plastid genome and most highly expressed mitochondrial genes of Welwitschia mirabilis. Science China. Life Sciences. PMID 30863960 DOI: 10.1007/S11427-018-9450-1 |
0.584 |
|
| 2018 |
Mower JP, Ma PF, Grewe F, Taylor A, Michael TP, VanBuren R, Qiu YL. Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat. The New Phytologist. PMID 30556907 DOI: 10.1111/Nph.15650 |
0.614 |
|
| 2018 |
Cole LW, Guo W, Mower JP, Palmer JD. High and variable rates of repeat-mediated mitochondrial genome rearrangement in a genus of plants. Molecular Biology and Evolution. PMID 30202905 DOI: 10.1093/Molbev/Msy176 |
0.777 |
|
| 2018 |
Zhu A, Fan W, Adams RP, Mower JP. Phylogenomic evidence for ancient recombination between plastid genomes of the Cupressus-Juniperus-Xanthocyparis complex (Cupressaceae). Bmc Evolutionary Biology. 18: 137. PMID 30200881 DOI: 10.1186/S12862-018-1258-2 |
0.502 |
|
| 2018 |
Robison TA, Grusz AL, Wolf PG, Mower JP, Fauskee BD, Sosa K, Schuettpelz E. Mobile elements shape plastome evolution in ferns. Genome Biology and Evolution. PMID 30165616 DOI: 10.1093/Gbe/Evy189 |
0.593 |
|
| 2017 |
Edger PP, VanBuren R, Colle M, Poorten TJ, Wai CM, Niederhuth CE, Alger EI, Ou S, Acharya CB, Wang J, Callow P, McKain MR, Shi J, Collier C, Xiong Z, ... Mower JP, et al. Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity. Gigascience. PMID 29253147 DOI: 10.1093/Gigascience/Gix124 |
0.492 |
|
| 2017 |
Fan W, Guo W, Van Etten JL, Mower JP. Multiple origins of endosymbionts in Chlorellaceae with no reductive effects on the plastid or mitochondrial genomes. Scientific Reports. 7: 10101. PMID 28855622 DOI: 10.1038/S41598-017-10388-W |
0.624 |
|
| 2017 |
Sigmon BA, Adams RP, Mower JP. Complete chloroplast genome sequencing of vetiver grass (Chrysopogon zizanioides) identifies markers that distinguish the non-fertile ‘Sunshine’ cultivar from other accessions Industrial Crops and Products. 108: 629-635. DOI: 10.1016/J.Indcrop.2017.07.029 |
0.519 |
|
| 2016 |
Fan W, Zhu A, Kozaczek M, Shah N, Pabón-Mora N, González F, Mower JP. Limited mitogenomic degradation in response to a parasitic lifestyle in Orobanchaceae. Scientific Reports. 6: 36285. PMID 27808159 DOI: 10.1038/Srep36285 |
0.579 |
|
| 2016 |
Sultan LD, Mileshina D, Grewe F, Rolle K, Abudraham S, Głodowicz P, Khan Niazi A, Keren I, Shevtsov S, Klipcan L, Barciszewski J, Mower JP, Dietrich A, Ostersetzer O. The reverse-transcriptase/RNA-maturase protein MatR is required for the splicing of various group II introns in Brassicaceae mitochondria. The Plant Cell. PMID 27760804 DOI: 10.1105/Tpc.16.00398 |
0.491 |
|
| 2016 |
Grewe F, Zhu A, Mower JP. Loss of a trans-splicing nad1 intron from Geraniaceae and transfer of the maturase gene matR to the nucleus in Pelargonium. Genome Biology and Evolution. PMID 27664178 DOI: 10.1093/Gbe/Evw233 |
0.571 |
|
| 2016 |
Guo W, Zhu A, Fan W, Mower JP. Complete mitochondrial genomes from the ferns Ophioglossum californicum and Psilotum nudum are highly repetitive with the largest organellar introns. The New Phytologist. PMID 27539928 DOI: 10.1111/Nph.14135 |
0.683 |
|
| 2016 |
Blazier JC, Jansen RK, Mower JP, Govindu M, Zhang J, Weng ML, Ruhlman TA. Variable presence of the inverted repeat and plastome stability in Erodium. Annals of Botany. PMID 27192713 DOI: 10.1093/Aob/Mcw065 |
0.6 |
|
| 2016 |
Guo W, Grewe F, Fan W, Young GJ, Knoop V, Palmer JD, Mower JP. Ginkgo and Welwitschia mitogenomes reveal extreme contrasts in gymnosperm mitochondrial evolution. Molecular Biology and Evolution. PMID 26831941 DOI: 10.1093/Molbev/Msw024 |
0.733 |
|
| 2015 |
Zhu A, Guo W, Gupta S, Fan W, Mower JP. Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates. The New Phytologist. PMID 26574731 DOI: 10.1111/Nph.13743 |
0.438 |
|
| 2015 |
Park S, Grewe F, Zhu A, Ruhlman TA, Sabir J, Mower JP, Jansen RK. Dynamic evolution of Geranium mitochondrial genomes through multiple horizontal and intracellular gene transfers. The New Phytologist. PMID 25989702 DOI: 10.1111/Nph.13467 |
0.761 |
|
| 2015 |
Guo W, Grewe F, Mower JP. Variable frequency of plastid RNA editing among ferns and repeated loss of uridine-to-cytidine editing from vascular plants. Plos One. 10: e0117075. PMID 25568947 DOI: 10.1371/Journal.Pone.0117075 |
0.408 |
|
| 2015 |
Jain K, Krause K, Grewe F, Nelson GF, Weber AP, Christensen AC, Mower JP. Extreme features of the Galdieria sulphuraria organellar genomes: a consequence of polyextremophily? Genome Biology and Evolution. 7: 367-80. PMID 25552531 DOI: 10.1093/Gbe/Evu290 |
0.543 |
|
| 2014 |
Grewe F, Edger PP, Keren I, Sultan L, Pires JC, Ostersetzer-Biran O, Mower JP. Comparative analysis of 11 Brassicales mitochondrial genomes and the mitochondrial transcriptome of Brassica oleracea. Mitochondrion. 19: 135-43. PMID 24907441 DOI: 10.1016/J.Mito.2014.05.008 |
0.65 |
|
| 2014 |
Guo W, Grewe F, Cobo-Clark A, Fan W, Duan Z, Adams RP, Schwarzbach AE, Mower JP. Predominant and substoichiometric isomers of the plastid genome coexist within Juniperus plants and have shifted multiple times during cupressophyte evolution. Genome Biology and Evolution. 6: 580-90. PMID 24586030 DOI: 10.1093/Gbe/Evu046 |
0.581 |
|
| 2014 |
Zhu A, Guo W, Jain K, Mower JP. Unprecedented heterogeneity in the synonymous substitution rate within a plant genome. Molecular Biology and Evolution. 31: 1228-36. PMID 24557444 DOI: 10.1093/Molbev/Msu079 |
0.671 |
|
| 2014 |
Mower JP, Sloan DB, Alverson AJ. Plant mitochondrial genome diversity: The genomics revolution Plant Genome Diversity. 1: 123-144. DOI: 10.1007/978-3-7091-1130-7_9 |
0.549 |
|
| 2013 |
Zhang J, Ruhlman TA, Mower JP, Jansen RK. Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing. Bmc Plant Biology. 13: 228. PMID 24373163 DOI: 10.1186/1471-2229-13-228 |
0.681 |
|
| 2013 |
Guo W, Mower JP. Evolution of plant mitochondrial intron-encoded maturases: frequent lineage-specific loss and recurrent intracellular transfer to the nucleus. Journal of Molecular Evolution. 77: 43-54. PMID 23979261 DOI: 10.1007/S00239-013-9579-7 |
0.674 |
|
| 2013 |
Grewe F, Guo W, Gubbels EA, Hansen AK, Mower JP. Complete plastid genomes from Ophioglossum californicum, Psilotum nudum, and Equisetum hyemale reveal an ancestral land plant genome structure and resolve the position of Equisetales among monilophytes. Bmc Evolutionary Biology. 13: 8. PMID 23311954 DOI: 10.1186/1471-2148-13-8 |
0.56 |
|
| 2012 |
Hepburn NJ, Schmidt DW, Mower JP. Loss of two introns from the Magnolia tripetala mitochondrial cox2 gene implicates horizontal gene transfer and gene conversion as a novel mechanism of intron loss. Molecular Biology and Evolution. 29: 3111-20. PMID 22593225 DOI: 10.1093/Molbev/Mss130 |
0.532 |
|
| 2012 |
Mower JP, Case AL, Floro ER, Willis JH. Evidence against equimolarity of large repeat arrangements and a predominant master circle structure of the mitochondrial genome from a monkeyflower (Mimulus guttatus) lineage with cryptic CMS. Genome Biology and Evolution. 4: 670-86. PMID 22534162 DOI: 10.1093/Gbe/Evs042 |
0.619 |
|
| 2012 |
Mower JP, Jain K, Hepburn NJ. The Role of Horizontal Transfer in Shaping the Plant Mitochondrial Genome Advances in Botanical Research. 63: 41-69. DOI: 10.1016/B978-0-12-394279-1.00003-X |
0.61 |
|
| 2010 |
Mower JP, Stefanović S, Hao W, Gummow JS, Jain K, Ahmed D, Palmer JD. Horizontal acquisition of multiple mitochondrial genes from a parasitic plant followed by gene conversion with host mitochondrial genes. Bmc Biology. 8: 150. PMID 21176201 DOI: 10.1186/1741-7007-8-150 |
0.752 |
|
| 2009 |
Mower JP, Bonen L. Ribosomal protein L10 is encoded in the mitochondrial genome of many land plants and green algae. Bmc Evolutionary Biology. 9: 265. PMID 19917118 DOI: 10.1186/1471-2148-9-265 |
0.603 |
|
| 2009 |
Mower JP. The PREP suite: predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments. Nucleic Acids Research. 37: W253-9. PMID 19433507 DOI: 10.1093/Nar/Gkp337 |
0.531 |
|
| 2008 |
Sanchez-Puerta MV, Cho Y, Mower JP, Alverson AJ, Palmer JD. Frequent, phylogenetically local horizontal transfer of the cox1 group I Intron in flowering plant mitochondria. Molecular Biology and Evolution. 25: 1762-77. PMID 18524785 DOI: 10.1093/Molbev/Msn129 |
0.753 |
|
| 2008 |
Mower JP. Modeling sites of RNA editing as a fifth nucleotide state reveals progressive loss of edited sites from angiosperm mitochondria. Molecular Biology and Evolution. 25: 52-61. PMID 17940211 DOI: 10.1093/Molbev/Msm226 |
0.48 |
|
| 2007 |
Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD. Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. Bmc Evolutionary Biology. 7: 135. PMID 17688696 DOI: 10.1186/1471-2148-7-135 |
0.72 |
|
| 2006 |
Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, Boore JL, Jansen RK. The complete chloroplast genome sequence of Pelargonium x hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Molecular Biology and Evolution. 23: 2175-90. PMID 16916942 DOI: 10.1093/Molbev/Msl089 |
0.74 |
|
| 2006 |
Mower JP, Palmer JD. Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris. Molecular Genetics and Genomics : Mgg. 276: 285-93. PMID 16862402 DOI: 10.1007/S00438-006-0139-3 |
0.699 |
|
| 2005 |
Parkinson CL, Mower JP, Qiu YL, Shirk AJ, Song K, Young ND, DePamphilis CW, Palmer JD. Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae. Bmc Evolutionary Biology. 5: 73. PMID 16368004 DOI: 10.1186/1471-2148-5-73 |
0.7 |
|
| 2005 |
Mower JP. PREP-Mt: predictive RNA editor for plant mitochondrial genes. Bmc Bioinformatics. 6: 96. PMID 15826309 DOI: 10.1186/1471-2105-6-96 |
0.503 |
|
| 2004 |
Cho Y, Mower JP, Qiu YL, Palmer JD. Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants. Proceedings of the National Academy of Sciences of the United States of America. 101: 17741-6. PMID 15598738 DOI: 10.1073/Pnas.0408302101 |
0.709 |
|
| 2004 |
Mower JP, Stefanović S, Young GJ, Palmer JD. Plant genetics: gene transfer from parasitic to host plants. Nature. 432: 165-6. PMID 15538356 DOI: 10.1038/432165B |
0.623 |
|
| 2004 |
Wang D, Oakley T, Mower J, Shimmin LC, Yim S, Honeycutt RL, Tsao H, Li WH. Molecular evolution of bat color vision genes. Molecular Biology and Evolution. 21: 295-302. PMID 14660703 DOI: 10.1093/Molbev/Msh015 |
0.376 |
|
| 2002 |
Goertzen LR, Francisco-Ortega J, Santos-Guerra A, Mower JP, Linder CR, Jansen RK. Molecular systematics of the Asteriscus alliance (Asteraceae: Inuleae) II: Combined nuclear and chloroplast data Systematic Botany. 27: 815-823. DOI: 10.1043/0363-6445-27.4.815 |
0.554 |
|
| Show low-probability matches. |