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Vinodh N. Rajapakse, Ph.D. - Publications

Affiliations: 
2013 Mathematics University of Maryland, College Park, College Park, MD 
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Weyemi U, Redon CE, Choudhuri R, Aziz T, Maeda D, Boufraqech M, Parekh PR, Sethi TK, Kasoji M, Abrams N, Merchant A, Rajapakse VN, Bonner WM. The histone variant H2A.X is a regulator of the epithelial-mesenchymal transition. Nature Communications. 7: 10711. PMID 26876487 DOI: 10.1038/ncomms10711  0.32
2015 Luna A, Rajapakse VN, Sousa FG, Gao J, Schultz N, Varma S, Reinhold W, Sander C, Pommier Y. rcellminer: Exploring Molecular Profiles and Drug Response of the NCI-60 Cell Lines in R. Bioinformatics (Oxford, England). PMID 26635141 DOI: 10.1093/bioinformatics/btv701  0.32
2015 Tang SW, Bilke S, Cao L, Murai J, Sousa FG, Yamade M, Rajapakse V, Varma S, Helman LJ, Khan J, Meltzer PS, Pommier Y. SLFN11 is a transcriptional target of EWS-FLI1 and a determinant of drug response in Ewing's sarcoma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 25779942 DOI: 10.1158/1078-0432.CCR-14-2112  0.32
2015 Sousa FG, Matuo R, Tang SW, Rajapakse VN, Luna A, Sander C, Varma S, Simon PH, Doroshow JH, Reinhold WC, Pommier Y. Alterations of DNA repair genes in the NCI-60 cell lines and their predictive value for anticancer drug activity. Dna Repair. 28: 107-15. PMID 25758781 DOI: 10.1016/j.dnarep.2015.01.011  0.32
2015 Reinhold WC, Varma S, Rajapakse VN, Luna A, Sousa FG, Kohn KW, Pommier YG. Using drug response data to identify molecular effectors, and molecular "omic" data to identify candidate drugs in cancer. Human Genetics. 134: 3-11. PMID 25213708 DOI: 10.1007/s00439-014-1482-9  0.32
2012 Rajapakse VN, Czaja W, Pommier YG, Reinhold WC, Varma S. Predicting expression-related features of chromosomal domain organization with network-structured analysis of gene expression and chromosomal location 2012 Acm Conference On Bioinformatics, Computational Biology and Biomedicine, Bcb 2012. 226-233. DOI: 10.1145/2382936.2382965  0.32
2011 Ehler M, Rajapakse VN, Zeeberg BR, Brooks BP, Brown J, Czaja W, Bonner RF. Nonlinear gene cluster analysis with labeling for microarray gene expression data in organ development. Bmc Proceedings. 5: S3. PMID 21554761 DOI: 10.1186/1753-6561-5-S2-S3  0.32
2011 Zeeberg BR, Liu H, Kahn AB, Ehler M, Rajapakse VN, Bonner RF, Brown JD, Brooks BP, Larionov VL, Reinhold W, Weinstein JN, Pommier YG. RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis. Bmc Bioinformatics. 12: 52. PMID 21310028 DOI: 10.1186/1471-2105-12-52  0.32
2010 Ehler M, Rajapakse V, Zeeberg B, Brooks B, Brown J, Czaja W, Bonner RF. Analysis of temporal-spatial co-variation within gene expression microarray data in an organogenesis model Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6053: 38-49. DOI: 10.1007/978-3-642-13078-6_6  0.32
2005 Brouwers FM, Petricoin EF, Ksinantova L, Breza J, Rajapakse V, Ross S, Johann D, Mannelli M, Shulkin BL, Kvetnansky R, Eisenhofer G, Walther MM, Hitt BA, Conrads TP, Veenstra TD, et al. Low molecular weight proteomic information distinguishes metastatic from benign pheochromocytoma. Endocrine-Related Cancer. 12: 263-72. PMID 15947101 DOI: 10.1677/erc.1.00913  0.32
2005 Stone JH, Rajapakse VN, Hoffman GS, Specks U, Merkel PA, Spiera RF, Davis JC, St Clair EW, McCune J, Ross S, Hitt BA, Veenstra TD, Conrads TP, Liotta LA, Petricoin EF, et al. A serum proteomic approach to gauging the state of remission in Wegener's granulomatosis. Arthritis and Rheumatism. 52: 902-10. PMID 15751091 DOI: 10.1002/art.20938  0.32
2004 Conrads TP, Fusaro VA, Ross S, Johann D, Rajapakse V, Hitt BA, Steinberg SM, Kohn EC, Fishman DA, Whitely G, Barrett JC, Liotta LA, Petricoin EF, Veenstra TD. High-resolution serum proteomic features for ovarian cancer detection. Endocrine-Related Cancer. 11: 163-78. PMID 15163296 DOI: 10.1677/erc.0.0110163  0.32
2003 Hingorani SR, Petricoin EF, Maitra A, Rajapakse V, King C, Jacobetz MA, Ross S, Conrads TP, Veenstra TD, Hitt BA, Kawaguchi Y, Johann D, Liotta LA, Crawford HC, Putt ME, et al. Preinvasive and invasive ductal pancreatic cancer and its early detection in the mouse. Cancer Cell. 4: 437-50. PMID 14706336 DOI: 10.1016/S1535-6108(03)00309-X  0.32
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