Martin A. Lindquist, Ph.D. - Publications

2001 Rutgers University, New Brunswick, New Brunswick, NJ, United States 
Biostatistics Biology, Radiology

76 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Mejia AF, Yue YR, Bolin D, Lindgren F, Lindquist MA. A Bayesian General Linear Modeling Approach to Cortical Surface fMRI Data Analysis. Journal of the American Statistical Association. 115: 501-520. PMID 33060871 DOI: 10.1080/01621459.2019.1611582  0.36
2020 Zhao Y, Lindquist MA, Caffo BS. Sparse Principal Component based High-Dimensional Mediation Analysis. Computational Statistics & Data Analysis. 142. PMID 32863492 DOI: 10.1016/j.csda.2019.106835  0.72
2020 Geuter S, Reynolds Losin EA, Roy M, Atlas LY, Schmidt L, Krishnan A, Koban L, Wager TD, Lindquist MA. Multiple Brain Networks Mediating Stimulus-Pain Relationships in Humans. Cerebral Cortex (New York, N.Y. : 1991). PMID 32219311 DOI: 10.1093/cercor/bhaa048  1
2019 van der Miesen MM, Lindquist MA, Wager TD. Neuroimaging-based biomarkers for pain: state of the field and current directions. Pain Reports. 4: e751. PMID 31579847 DOI: 10.1097/PR9.0000000000000751  1
2019 Honari H, Choe AS, Pekar JJ, Lindquist MA. Investigating the impact of autocorrelation on time-varying connectivity. Neuroimage. PMID 31022568 DOI: 10.1016/j.neuroimage.2019.04.042  0.36
2019 Shappell H, Caffo BS, Pekar JJ, Lindquist MA. Improved state change estimation in dynamic functional connectivity using hidden semi-Markov models. Neuroimage. PMID 30753927 DOI: 10.1016/j.neuroimage.2019.02.013  0.72
2019 Seminowicz DA, Remeniuk B, Krimmel SR, Smith MT, Barrett FS, Wulff AB, Furman AJ, Geuter S, Lindquist MA, Irwin MR, Finan PH. Pain-Related Nucleus Accumbens Function: Modulation by Reward and Sleep Disruption. Pain. PMID 30753171 DOI: 10.1097/j.pain.0000000000001498  0.72
2019 Krause AJ, Prather AA, Wager TD, Lindquist MA, Walker MP. The pain of sleep loss: A brain characterization in humans. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30692228 DOI: 10.1523/JNEUROSCI.2408-18.2018  1
2019 Lindquist MA, Geuter S, Wager TD, Caffo BS. Modular preprocessing pipelines can reintroduce artifacts into fMRI data. Human Brain Mapping. PMID 30666750 DOI: 10.1002/hbm.24528  1
2018 Zhu X, Suarez-Jimenez B, Lazarov A, Helpman L, Papini S, Lowell A, Durosky A, Lindquist MA, Markowitz JC, Schneier F, Wager TD, Neria Y. Exposure-based therapy changes amygdala and hippocampus resting-state functional connectivity in patients with posttraumatic stress disorder. Depression and Anxiety. PMID 30260530 DOI: 10.1002/da.22816  1
2018 Mejia AF, Nebel MB, Barber AD, Choe AS, Pekar JJ, Caffo BS, Lindquist MA. Improved estimation of subject-level functional connectivity using full and partial correlation with empirical Bayes shrinkage. Neuroimage. PMID 29391241 DOI: 10.1016/j.neuroimage.2018.01.029  0.72
2017 Webb-Vargas Y, Chen S, Fisher A, Mejia A, Xu Y, Crainiceanu C, Caffo B, Lindquist MA. Big Data and Neuroimaging. Statistics in Biosciences. 9: 543-558. PMID 29335670 DOI: 10.1007/s12561-017-9195-y  0.44
2017 Syed MF, Lindquist M, Pillai JJ, Agarwal S, Gujar SK, Choe AS, Caffo BS, Sair HI. Dynamic functional connectivity states between the dorsal and ventral sensorimotor networks revealed by Dynamic Conditional Correlation analysis of resting state functional MRI. Brain Connectivity. PMID 28969437 DOI: 10.1089/brain.2017.0533  0.72
2017 Choe AS, Nebel MB, Barber AD, Cohen JR, Xu Y, Pekar JJ, Caffo B, Lindquist MA. Comparing test-retest reliability of dynamic functional connectivity methods. Neuroimage. PMID 28687517 DOI: 10.1016/j.neuroimage.2017.07.005  0.44
2017 Chén OY, Crainiceanu C, Ogburn EL, Caffo BS, Wager TD, Lindquist MA. High-dimensional multivariate mediation with application to neuroimaging data. Biostatistics (Oxford, England). PMID 28637279 DOI: 10.1093/biostatistics/kxx027  1
2017 Mejia AF, Nebel MB, Eloyan A, Caffo B, Lindquist MA. PCA leverage: outlier detection for high-dimensional functional magnetic resonance imaging data. Biostatistics (Oxford, England). PMID 28334131 DOI: 10.1093/biostatistics/kxw050  0.4
2017 Chen S, Huang L, Qiu H, Nebel MB, Mostofsky SH, Pekar JJ, Lindquist MA, Eloyan A, Caffo BS. Parallel group independent component analysis for massive fMRI data sets. Plos One. 12: e0173496. PMID 28278208 DOI: 10.1371/journal.pone.0173496  0.72
2017 Woo CW, Chang LJ, Lindquist MA, Wager TD. Building better biomarkers: brain models in translational neuroimaging. Nature Neuroscience. 20: 365-377. PMID 28230847 DOI: 10.1038/nn.4478  1
2017 Woo CW, Schmidt L, Krishnan A, Jepma M, Roy M, Lindquist MA, Atlas LY, Wager TD. Quantifying cerebral contributions to pain beyond nociception. Nature Communications. 8: 14211. PMID 28195170 DOI: 10.1038/ncomms14211  1
2017 Reddan MC, Lindquist MA, Wager TD. Effect Size Estimation in Neuroimaging. Jama Psychiatry. PMID 28099973 DOI: 10.1001/jamapsychiatry.2016.3356  1
2016 Zhu X, Helpman L, Papini S, Schneier F, Markowitz JC, Van Meter PE, Lindquist MA, Wager TD, Neria Y. Altered resting state functional connectivity of fear and reward circuitry in comorbid PTSD and major depression. Depression and Anxiety. PMID 28030757 DOI: 10.1002/da.22594  1
2016 Huang L, Reiss PT, Xiao L, Zipunnikov V, Lindquist MA, Crainiceanu CM. Two-way principal component analysis for matrix-variate data, with an application to functional magnetic resonance imaging data. Biostatistics (Oxford, England). PMID 27578805 DOI: 10.1093/biostatistics/kxw040  0.36
2016 Agarwal S, Sair HI, Airan R, Hua J, Jones CK, Heo HY, Olivi A, Lindquist MA, Pekar JJ, Pillai JJ. Demonstration of Brain Tumor-Induced Neurovascular Uncoupling in Resting-State fMRI at Ultrahigh Field. Brain Connectivity. PMID 26918887 DOI: 10.1089/brain.2015.0402  0.36
2015 Sair HI, Yahyavi-Firouz-Abadi N, Calhoun VD, Airan RD, Agarwal S, Intrapiromkul J, Choe AS, Gujar SK, Caffo B, Lindquist MA, Pillai JJ. Presurgical brain mapping of the language network in patients with brain tumors using resting-state fMRI: Comparison with task fMRI. Human Brain Mapping. PMID 26663615 DOI: 10.1002/hbm.23075  1
2015 Lindquist MA, Krishnan A, Lopez-Sola M, Jepma M, Woo CW, Koban L, Roy M, Atlas LY, Chang LJ, Losin L, Eisenbarth H, Ashar YK, Delk Z, Wager TD. Group-regularized individual prediction: theory and application to pain. Neuroimage. PMID 26592808 DOI: 10.1016/j.neuroimage.2015.10.074  1
2015 Choe AS, Jones CK, Joel SE, Muschelli J, Belegu V, Caffo BS, Lindquist MA, van Zijl PC, Pekar JJ. Reproducibility and Temporal Structure in Weekly Resting-State fMRI over a Period of 3.5 Years. Plos One. 10: e0140134. PMID 26517540 DOI: 10.1371/journal.pone.0140134  1
2015 Xu Y, Lindquist MA. Dynamic connectivity detection: an algorithm for determining functional connectivity change points in fMRI data. Frontiers in Neuroscience. 9: 285. PMID 26388711 DOI: 10.3389/fnins.2015.00285  1
2015 Bedi G, Lindquist MA, Haney M. An fMRI-Based Neural Signature of Decisions to Smoke Cannabis. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. 40: 2657-65. PMID 25962875 DOI: 10.1038/npp.2015.135  1
2015 Wong AL, Lindquist MA, Haith AM, Krakauer JW. Explicit knowledge enhances motor vigor and performance: motivation versus practice in sequence tasks. Journal of Neurophysiology. 114: 219-32. PMID 25904709 DOI: 10.1152/jn.00218.2015  1
2015 Mejia AF, Nebel MB, Shou H, Crainiceanu CM, Pekar JJ, Mostofsky S, Caffo B, Lindquist MA. Improving reliability of subject-level resting-state fMRI parcellation with shrinkage estimators. Neuroimage. 112: 14-29. PMID 25731998 DOI: 10.1016/j.neuroimage.2015.02.042  1
2015 Hannawi Y, Lindquist MA, Caffo BS, Sair HI, Stevens RD. Resting brain activity in disorders of consciousness: a systematic review and meta-analysis. Neurology. 84: 1272-80. PMID 25713001 DOI: 10.1212/WNL.0000000000001404  1
2015 Lindquist MA, Mejia A. Zen and the art of multiple comparisons. Psychosomatic Medicine. 77: 114-25. PMID 25647751 DOI: 10.1097/PSY.0000000000000148  1
2015 Lindquist MA, Wager TD. Meta-Analyses in Functional Neuroimaging Brain Mapping: An Encyclopedic Reference. 1: 661-665. DOI: 10.1016/B978-0-12-397025-1.00348-1  1
2014 Sobel ME, Lindquist MA. Causal Inference for fMRI Time Series Data with Systematic Errors of Measurement in a Balanced On/Off Study of Social Evaluative Threat. Journal of the American Statistical Association. 109: 967-976. PMID 25506108 DOI: 10.1080/01621459.2014.922886  1
2014 Woo CW, Koban L, Kross E, Lindquist MA, Banich MT, Ruzic L, Andrews-Hanna JR, Wager TD. Separate neural representations for physical pain and social rejection. Nature Communications. 5: 5380. PMID 25400102 DOI: 10.1038/ncomms6380  1
2014 Eloyan A, Shou H, Shinohara RT, Sweeney EM, Nebel MB, Cuzzocreo JL, Calabresi PA, Reich DS, Lindquist MA, Crainiceanu CM. Health effects of lesion localization in multiple sclerosis: spatial registration and confounding adjustment. Plos One. 9: e107263. PMID 25233361 DOI: 10.1371/journal.pone.0107263  1
2014 Lindquist MA, Xu Y, Nebel MB, Caffo BS. Evaluating dynamic bivariate correlations in resting-state fMRI: a comparison study and a new approach. Neuroimage. 101: 531-46. PMID 24993894 DOI: 10.1016/j.neuroimage.2014.06.052  1
2014 Shou H, Eloyan A, Nebel MB, Mejia A, Pekar JJ, Mostofsky S, Caffo B, Lindquist MA, Crainiceanu CM. Shrinkage prediction of seed-voxel brain connectivity using resting state fMRI. Neuroimage. 102: 938-44. PMID 24879924 DOI: 10.1016/j.neuroimage.2014.05.043  1
2014 Atlas LY, Lindquist MA, Bolger N, Wager TD. Brain mediators of the effects of noxious heat on pain. Pain. 155: 1632-48. PMID 24845572 DOI: 10.1016/j.pain.2014.05.015  1
2014 Degras D, Lindquist MA. A hierarchical model for simultaneous detection and estimation in multi-subject fMRI studies. Neuroimage. 98: 61-72. PMID 24793829 DOI: 10.1016/j.neuroimage.2014.04.052  1
2013 Cribben I, Wager TD, Lindquist MA. Detecting functional connectivity change points for single-subject fMRI data. Frontiers in Computational Neuroscience. 7: 143. PMID 24198781 DOI: 10.3389/fncom.2013.00143  1
2013 Shou H, Eloyan A, Lee S, Zipunnikov V, Crainiceanu AN, Nebel MB, Caffo B, Lindquist MA, Crainiceanu CM. Quantifying the reliability of image replication studies: The image intraclass correlation coefficient (I2C2) Cognitive, Affective and Behavioral Neuroscience. 13: 714-724. PMID 24022791 DOI: 10.3758/s13415-013-0196-0  1
2013 Lindquist MA, Caffo B, Crainiceanu C. Ironing out the statistical wrinkles in "ten ironic rules". Neuroimage. 81: 499-502. PMID 23587691 DOI: 10.1016/j.neuroimage.2013.02.056  1
2013 Wager TD, Atlas LY, Lindquist MA, Roy M, Woo CW, Kross E. An fMRI-based neurologic signature of physical pain. The New England Journal of Medicine. 368: 1388-97. PMID 23574118 DOI: 10.1056/NEJMoa1204471  1
2013 Lindquist MA, Sobel ME. Cloak and DAG: a response to the comments on our comment. Neuroimage. 76: 446-9. PMID 22119004 DOI: 10.1016/j.neuroimage.2011.11.027  1
2012 Lindquist MA. Functional Causal Mediation Analysis With an Application to Brain Connectivity. Journal of the American Statistical Association. 107: 1297-1309. PMID 25076802 DOI: 10.1080/01621459.2012.695640  1
2012 Atlas LY, Whittington RA, Lindquist MA, Wielgosz J, Sonty N, Wager TD. Dissociable influences of opiates and expectations on pain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 8053-64. PMID 22674280 DOI: 10.1523/JNEUROSCI.0383-12.2012  1
2012 Cribben I, Haraldsdottir R, Atlas LY, Wager TD, Lindquist MA. Dynamic connectivity regression: determining state-related changes in brain connectivity. Neuroimage. 61: 907-20. PMID 22484408 DOI: 10.1016/j.neuroimage.2012.03.070  1
2012 Rao R, Jonsson NJ, Ventura C, Gelman R, Lindquist MA, Casper DS, Chiang MF. Plus disease in retinopathy of prematurity: diagnostic impact of field of view. Retina (Philadelphia, Pa.). 32: 1148-55. PMID 22466473 DOI: 10.1097/IAE.0b013e31823ac3c3  1
2012 Lindquist MA, Spicer J, Asllani I, Wager TD. Estimating and testing variance components in a multi-level GLM. Neuroimage. 59: 490-501. PMID 21835242 DOI: 10.1016/j.neuroimage.2011.07.077  1
2012 Burke CT, Shrout PE, Bolger N. Bereavement as a potential turning point: Modeling between-person variability in adjustment to conjugal loss Applied Data Analytic Techniques For Turning Points Research. 138-157. DOI: 10.4324/9780203843147  1
2012 Yue YR, Lindquist MA, Loh JM. Meta-analysis of functional neuroimaging data using bayesian nonparametric binary regression Annals of Applied Statistics. 6: 697-718. DOI: 10.1214/11-AOAS523  1
2011 Lindquist MA, Sobel ME. Graphical models, potential outcomes and causal inference: comment on Ramsey, Spirtes and Glymour. Neuroimage. 57: 334-6. PMID 20970507 DOI: 10.1016/j.neuroimage.2010.10.020  1
2010 Atlas LY, Bolger N, Lindquist MA, Wager TD. Brain mediators of predictive cue effects on perceived pain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 12964-77. PMID 20881115 DOI: 10.1523/JNEUROSCI.0057-10.2010  1
2010 Kriegeskorte N, Lindquist MA, Nichols TE, Poldrack RA, Vul E. Everything you never wanted to know about circular analysis, but were afraid to ask. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 30: 1551-7. PMID 20571517 DOI: 10.1038/jcbfm.2010.86  1
2010 Ottowitz WE, Deckersbach T, Savage CR, Lindquist MA, Dougherty DD. Neural correlates of strategic processes underlying episodic memory in women with major depression: A 15O-PET study. The Journal of Neuropsychiatry and Clinical Neurosciences. 22: 218-30. PMID 20463116 DOI: 10.1176/appi.neuropsych.22.2.218  1
2010 Robinson LF, Wager TD, Lindquist MA. Change point estimation in multi-subject fMRI studies. Neuroimage. 49: 1581-92. PMID 19733671 DOI: 10.1016/j.neuroimage.2009.08.061  1
2010 Lindquist MA. The benefits of rapid 3D fMRI International Journal of Imaging Systems and Technology. 20: 14-22. DOI: 10.1002/ima.20217  1
2009 Wager TD, van Ast VA, Hughes BL, Davidson ML, Lindquist MA, Ochsner KN. Brain mediators of cardiovascular responses to social threat, part II: Prefrontal-subcortical pathways and relationship with anxiety. Neuroimage. 47: 836-51. PMID 19465135 DOI: 10.1016/j.neuroimage.2009.05.044  1
2009 Lindquist MA, Meng Loh J, Atlas LY, Wager TD. Modeling the hemodynamic response function in fMRI: efficiency, bias and mis-modeling. Neuroimage. 45: S187-98. PMID 19084070 DOI: 10.1016/j.neuroimage.2008.10.065  1
2009 Wager TD, Lindquist MA, Nichols TE, Kober H, Van Snellenberg JX. Evaluating the consistency and specificity of neuroimaging data using meta-analysis. Neuroimage. 45: S210-21. PMID 19063980 DOI: 10.1016/j.neuroimage.2008.10.061  1
2009 Lindquist MA, Mckeague IW. Logistic regression with brownian-like predictors Journal of the American Statistical Association. 104: 1575-1585. DOI: 10.1198/jasa.2009.tm08496  1
2008 Ottowitz WE, Siedlecki KL, Lindquist MA, Dougherty DD, Fischman AJ, Hall JE. Evaluation of prefrontal-hippocampal effective connectivity following 24 hours of estrogen infusion: an FDG-PET study. Psychoneuroendocrinology. 33: 1419-25. PMID 18977091 DOI: 10.1016/j.psyneuen.2008.09.013  1
2008 Wager TD, Davidson ML, Hughes BL, Lindquist MA, Ochsner KN. Prefrontal-subcortical pathways mediating successful emotion regulation. Neuron. 59: 1037-50. PMID 18817740 DOI: 10.1016/j.neuron.2008.09.006  1
2008 Ottowitz WE, Derro D, Dougherty DD, Lindquist MA, Fischman AJ, Hall JE. FDG-PET analysis of amygdalar-cortical network covariance during pre- versus post-menopausal estrogen levels: potential relevance to resting state networks, mood, and cognition. Neuro Endocrinology Letters. 29: 467-74. PMID 18766152  1
2008 Lindquist MA, Zhang CH, Glover G, Shepp L. Rapid three-dimensional functional magnetic resonance imaging of the initial negative BOLD response. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 191: 100-11. PMID 18207441 DOI: 10.1016/j.jmr.2007.12.016  1
2008 Lindquist MA, Wager TD. Spatial smoothing in fMRI using prolate spheroidal wave functions. Human Brain Mapping. 29: 1276-87. PMID 17979120 DOI: 10.1002/hbm.20475  1
2008 Lindquist MA. The Statistical Analysis of fMRI Data Statistical Science. 23: 439-464. DOI: 10.1214/09-STS282  1
2008 Loh JM, Lindquist MA, Wager TD. Residual analysis for detecting mis-modeling in fMRI Statistica Sinica. 18: 1421-1448.  1
2008 Lindquist MA, Zhang CH, Glover G, Shepp L. The acquisition and statistical analysis of rapid 3D fMRI data Statistica Sinica. 18: 1395-1419.  1
2007 Lindquist MA, Waugh C, Wager TD. Modeling state-related fMRI activity using change-point theory. Neuroimage. 35: 1125-41. PMID 17360198 DOI: 10.1016/j.neuroimage.2007.01.004  1
2007 Lindquist MA, Wager TD. Validity and power in hemodynamic response modeling: a comparison study and a new approach. Human Brain Mapping. 28: 764-84. PMID 17094118 DOI: 10.1002/hbm.20310  1
2006 Lindquist MA, Zhang CH, Glover G, Shepp L, Yang QX. A generalization of the two-dimensional prolate spheroidal wave function method for nonrectilinear MRI data acquisition methods. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 15: 2792-804. PMID 16948323 DOI: 10.1109/TIP.2006.877314  1
2003 Lindquist MA. Optimal data acquisition in fMRI using prolate spheroidal wave functions International Journal of Imaging Systems and Technology. 13: 126-132. DOI: 10.1002/ima.10051  1
2002 Yang QX, Lindquist MA, Shepp L, Zhang CH, Wang J, Smith MB. Two dimensional prolate spheroidal wave functions for MRI. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 158: 43-51. PMID 12419670 DOI: 10.1016/S1090-7807(02)00058-7  1
2001 Lindquist MA. Fast functional MRI Proceedings of Spie - the International Society For Optical Engineering. 4478: 163-171. DOI: 10.1117/12.449699  1
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