Janet S. Sinsheimer - Publications

University of California, Los Angeles, Los Angeles, CA 
Mathematics, Biostatistics Biology

135 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhou H, Sinsheimer JS, Bates DM, Chu BB, German CA, Ji SS, Keys KL, Kim J, Ko S, Mosher GD, Papp JC, Sobel EM, Zhai J, Zhou JJ, Lange K. OPENMENDEL: a cooperative programming project for statistical genetics. Human Genetics. PMID 30915546 DOI: 10.1007/s00439-019-02001-z  0.32
2018 Palmer CGS, McConkie-Rosell A, Holm IA, LeBlanc K, Sinsheimer JS, Briere LC, Dorrani N, Herzog MR, Lincoln S, Schoch K, Spillmann RC, Brokamp E. Understanding Adult Participant and Parent Empowerment Prior to Evaluation in the Undiagnosed Diseases Network. Journal of Genetic Counseling. PMID 29497923 DOI: 10.1007/s10897-018-0228-6  0.44
2017 Clark MM, Chazara O, Sobel EM, Gjessing HK, Magnus P, Moffett A, Sinsheimer JS. Human Birth Weight and Reproductive Immunology: Testing for Interactions between Maternal and Offspring KIR and HLA-C Genes. Human Heredity. 81: 181-193. PMID 28214848 DOI: 10.1159/000456033  0.32
2016 Lee PC, Raaschou-Nielsen O, Lill CM, Bertram L, Sinsheimer JS, Hansen J, Ritz B. Gene-environment interactions linking air pollution and inflammation in Parkinson's disease. Environmental Research. 151: 713-720. PMID 27640071 DOI: 10.1016/j.envres.2016.09.006  0.44
2015 Cybis GB, Sinsheimer JS, Bedford T, Mather AE, Lemey P, Suchard MA. ASSESSING PHENOTYPIC CORRELATION THROUGH THE MULTIVARIATE PHYLOGENETIC LATENT LIABILITY MODEL. The Annals of Applied Statistics. 9: 969-991. PMID 27053974 DOI: 10.1214/15-AOAS821  0.44
2015 Levine AJ, Soontornniyomkij V, Achim CL, Masliah E, Gelman BB, Sinsheimer JS, Singer EJ, Moore DJ. Multilevel analysis of neuropathogenesis of neurocognitive impairment in HIV. Journal of Neurovirology. PMID 26637429 DOI: 10.1007/s13365-015-0410-7  0.44
2015 Clark MM, Blangero J, Dyer TD, Sobel EM, Sinsheimer JS. The Quantitative-MFG Test: A Linear Mixed Effect Model to Detect Maternal-Offspring Gene Interactions. Annals of Human Genetics. PMID 26567478 DOI: 10.1111/ahg.12137  0.44
2015 Paul KC, Sinsheimer JS, Rhodes SL, Cockburn M, Bronstein J, Ritz B. Organophosphate Pesticide Exposures, Nitric Oxide Synthase Gene Variants, and Gene-Pesticide Interactions in a Case-Control Study of Parkinson's Disease, California (USA). Environmental Health Perspectives. PMID 26383258 DOI: 10.1289/ehp.1408976  0.44
2015 Gilbert PS, Chang J, Pan C, Sobel EM, Sinsheimer JS, Faircloth BC, Alfaro ME. Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes. Molecular Phylogenetics and Evolution. 92: 140-146. PMID 26079130 DOI: 10.1016/j.ympev.2015.05.027  0.32
2015 Rickabaugh TM, Baxter RM, Sehl M, Sinsheimer JS, Hultin PM, Hultin LE, Quach A, Martínez-Maza O, Horvath S, Vilain E, Jamieson BD. Acceleration of age-associated methylation patterns in HIV-1-infected adults. Plos One. 10: e0119201. PMID 25807146 DOI: 10.1371/journal.pone.0119201  0.44
2015 Lee PC, Bordelon Y, Bronstein J, Sinsheimer JS, Farrer M, Ritz B. Head injury, α-synuclein genetic variability and Parkinson's disease. European Journal of Neurology : the Official Journal of the European Federation of Neurological Societies. 22: 874-8. PMID 25370538 DOI: 10.1111/ene.12585  0.44
2015 Han E, Sinsheimer JS, Novembre J. Fast and accurate site frequency spectrum estimation from low coverage sequence data. Bioinformatics (Oxford, England). 31: 720-7. PMID 25359894 DOI: 10.1093/bioinformatics/btu725  0.44
2014 Palmer CG, Boudreault P, Baldwin EE, Sinsheimer JS. Impact of genetic counseling and Connexin-26 and Connexin-30 testing on deaf identity and comprehension of genetic test results in a sample of deaf adults: a prospective, longitudinal study. Plos One. 9: e111512. PMID 25375116 DOI: 10.1371/journal.pone.0111512  0.44
2014 Lange K, Papp JC, Sinsheimer JS, Sobel EM. Next Generation Statistical Genetics: Modeling, Penalization, and Optimization in High-Dimensional Data. Annual Review of Statistics and Its Application. 1: 279-300. PMID 24955378 DOI: 10.1146/annurev-statistics-022513-115638  0.44
2014 Ngun TC, Ghahramani NM, Creek MM, Williams-Burris SM, Barseghyan H, Itoh Y, Sánchez FJ, McClusky R, Sinsheimer JS, Arnold AP, Vilain E. Feminized behavior and brain gene expression in a novel mouse model of Klinefelter Syndrome. Archives of Sexual Behavior. 43: 1043-57. PMID 24923877 DOI: 10.1007/s10508-014-0316-0  0.44
2014 Anastasopoulos E, Coleman AL, Wilson MR, Sinsheimer JS, Yu F, Katafigiotis S, Founti P, Salonikiou A, Pappas T, Koskosas A, Katopodi T, Lambropoulos A, Topouzis F. Association of LOXL1 polymorphisms with pseudoexfoliation, glaucoma, intraocular pressure, and systemic diseases in a Greek population. The Thessaloniki eye study. Investigative Ophthalmology & Visual Science. 55: 4238-43. PMID 24917141 DOI: 10.1167/iovs.14-13991  0.44
2014 Ko A, Cantor RM, Weissglas-Volkov D, Nikkola E, Reddy PM, Sinsheimer JS, Pasaniuc B, Brown R, Alvarez M, Rodriguez A, Rodriguez-Guillen R, Bautista IC, Arellano-Campos O, Muñoz-Hernández LL, Salomaa V, et al. Amerindian-specific regions under positive selection harbour new lipid variants in Latinos. Nature Communications. 5: 3983. PMID 24886709 DOI: 10.1038/ncomms4983  0.44
2014 Arboleda VA, Fleming A, Barseghyan H, Délot E, Sinsheimer JS, Vilain E. Regulation of sex determination in mice by a non-coding genomic region. Genetics. 197: 885-97. PMID 24793290 DOI: 10.1534/genetics.113.160259  0.44
2014 Levine AJ, Reynolds S, Cox C, Miller EN, Sinsheimer JS, Becker JT, Martin E, Sacktor N. The longitudinal and interactive effects of HIV status, stimulant use, and host genotype upon neurocognitive functioning. Journal of Neurovirology. 20: 243-57. PMID 24737013 DOI: 10.1007/s13365-014-0241-y  0.44
2014 Han E, Sinsheimer JS, Novembre J. Characterizing bias in population genetic inferences from low-coverage sequencing data Molecular Biology and Evolution. 31: 723-735. PMID 24288159 DOI: 10.1093/molbev/mst229  0.44
2014 Rhodes SL, Buchanan DD, Ahmed I, Taylor KD, Loriot MA, Sinsheimer JS, Bronstein JM, Elbaz A, Mellick GD, Rotter JI, Ritz B. Pooled analysis of iron-related genes in Parkinson's disease: association with transferrin. Neurobiology of Disease. 62: 172-8. PMID 24121126 DOI: 10.1016/j.nbd.2013.09.019  0.44
2014 Sinsheimer JS, Creek MM. Statistical approaches for detecting transgenerational genetic effects in humans Epigenetics and Complex Traits. 247-264. DOI: 10.1007/978-1-4614-8078-5_11  0.44
2013 Panos SE, Hinkin CH, Singer EJ, Thames AD, Patel SM, Sinsheimer JS, Del Re AC, Gelman BB, Morgello S, Moore DJ, Levine AJ. Apolipoprotein-E genotype and human immunodeficiency virus-associated neurocognitive disorder: the modulating effects of older age and disease severity. Neurobehavioral Hiv Medicine. 5: 11-22. PMID 26617462 DOI: 10.2147/NBHIV.S39573  0.44
2013 Lake JA, Sinsheimer JS. The deep roots of the rings of life. Genome Biology and Evolution. 5: 2440-8. PMID 24281049 DOI: 10.1093/gbe/evt194  0.44
2013 Kobayashi Y, Boudreault P, Hill K, Sinsheimer JS, Palmer CG. Using a social marketing framework to evaluate recruitment of a prospective study of genetic counseling and testing for the deaf community. Bmc Medical Research Methodology. 13: 145. PMID 24274380 DOI: 10.1186/1471-2288-13-145  0.44
2013 Narayan S, Liew Z, Paul K, Lee PC, Sinsheimer JS, Bronstein JM, Ritz B. Household organophosphorus pesticide use and Parkinson's disease. International Journal of Epidemiology. 42: 1476-85. PMID 24057998 DOI: 10.1093/ije/dyt170  0.44
2013 Rhodes SL, Fitzmaurice AG, Cockburn M, Bronstein JM, Sinsheimer JS, Ritz B. Pesticides that inhibit the ubiquitin-proteasome system: effect measure modification by genetic variation in SKP1 in Parkinson׳s disease. Environmental Research. 126: 1-8. PMID 23988235 DOI: 10.1016/j.envres.2013.08.001  0.44
2013 Lange K, Papp JC, Sinsheimer JS, Sripracha R, Zhou H, Sobel EM. Mendel: the Swiss army knife of genetic analysis programs. Bioinformatics (Oxford, England). 29: 1568-70. PMID 23610370 DOI: 10.1093/bioinformatics/btt187  0.44
2013 Lee PC, Rhodes SL, Sinsheimer JS, Bronstein J, Ritz B. Functional paraoxonase 1 variants modify the risk of Parkinson's disease due to organophosphate exposure. Environment International. 56: 42-7. PMID 23602893 DOI: 10.1016/j.envint.2013.03.004  0.44
2013 Weissglas-Volkov D, Aguilar-Salinas CA, Nikkola E, Deere KA, Cruz-Bautista I, Arellano-Campos O, Muñoz-Hernandez LL, Gomez-Munguia L, Ordoñez-Sánchez ML, Reddy PM, Lusis AJ, Matikainen N, Taskinen MR, Riba L, Cantor RM, ... Sinsheimer JS, et al. Genomic study in Mexicans identifies a new locus for triglycerides and refines European lipid loci. Journal of Medical Genetics. 50: 298-308. PMID 23505323 DOI: 10.1136/jmedgenet-2012-101461  0.44
2013 Palmer CG, Boudreault P, Baldwin EE, Fox M, Deignan JL, Kobayashi Y, Sininger Y, Grody W, Sinsheimer JS. Deaf genetic testing and psychological well-being in deaf adults. Journal of Genetic Counseling. 22: 492-507. PMID 23430402 DOI: 10.1007/s10897-013-9573-7  0.44
2013 Cybis GB, Sinsheimer JS, Lemey P, Suchard MA. Graph hierarchies for phylogeography. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20120206. PMID 23382428 DOI: 10.1098/rstb.2012.0206  0.44
2012 Riley L, Zhou H, Lange K, Sinsheimer JS, Sehl ME. Determining duration of HER2-targeted therapy using stem cell extinction models. Plos One. 7: e46613. PMID 23284608 DOI: 10.1371/journal.pone.0046613  0.44
2012 Reddy MV, Iatan I, Weissglas-Volkov D, Nikkola E, Haas BE, Juvonen M, Ruel I, Ruel MJ, Sinsheimer JS, Genest J, Pajukanta P. Exome sequencing identifies 2 rare variants for low high-density lipoprotein cholesterol in an extended family. Circulation. Cardiovascular Genetics. 5: 538-46. PMID 22923419 DOI: 10.1161/CIRCGENETICS.112.963264  0.44
2012 Anastasopoulos E, Kakoulidou A, Coleman AL, Sinsheimer JS, Wilson MR, Yu F, Salonikiou A, Koskosas A, Pappas T, Founti P, Lambropoulos A, Topouzis F. Association of sequence variation in the CX3CR1 gene with geographic atrophy age-related macular degeneration in a Greek population. Current Eye Research. 37: 1148-55. PMID 22816662 DOI: 10.3109/02713683.2012.705413  0.44
2012 Sinsheimer JS, Little RJ, Lake JA. Rooting gene trees without outgroups: EP rooting. Genome Biology and Evolution. 4: 709-19. PMID 22593551 DOI: 10.1093/gbe/evs047  0.44
2012 Tom JA, Sinsheimer JS, Suchard MA. Does history repeat itself? Wavelets and the phylodynamics of influenza A. Molecular Biology and Evolution. 29: 1367-77. PMID 22160768 DOI: 10.1093/molbev/msr305  0.44
2012 Zhou JJ, Ghazalpour A, Sobel EM, Sinsheimer JS, Lange K. Quantitative trait Loci association mapping by imputation of strain origins in multifounder crosses. Genetics. 190: 459-73. PMID 22143921 DOI: 10.1534/genetics.111.135095  0.44
2012 Deere KA, Grether GF, Sun A, Sinsheimer JS. Female mate preference explains countergradient variation in the sexual coloration of guppies (Poecilia reticulata). Proceedings. Biological Sciences / the Royal Society. 279: 1684-90. PMID 22113030 DOI: 10.1098/rspb.2011.2132  0.44
2012 Levine AJ, Sinsheimer JS, Bilder R, Shapshak P, Singer EJ. Functional polymorphisms in dopamine-related genes: effect on neurocognitive functioning in HIV+ adults. Journal of Clinical and Experimental Neuropsychology. 34: 78-91. PMID 22082040 DOI: 10.1080/13803395.2011.623118  0.44
2012 Baldwin EE, Boudreault P, Fox M, Sinsheimer JS, Palmer CG. Effect of pre-test genetic counseling for deaf adults on knowledge of genetic testing. Journal of Genetic Counseling. 21: 256-72. PMID 21818696 DOI: 10.1007/s10897-011-9398-1  0.44
2011 Childs EJ, Sobel EM, Palmer CG, Sinsheimer JS. Detection of intergenerational genetic effects with application to HLA-B matching as a risk factor for schizophrenia. Human Heredity. 72: 161-72. PMID 22004985 DOI: 10.1159/000332051  0.44
2011 Sehl M, Zhou H, Sinsheimer JS, Lange KL. Extinction models for cancer stem cell therapy. Mathematical Biosciences. 234: 132-46. PMID 22001354 DOI: 10.1016/j.mbs.2011.09.005  0.44
2011 Weissglas-Volkov D, Calkin AC, Tusie-Luna T, Sinsheimer JS, Zelcer N, Riba L, Tino AM, Ordoñez-Sánchez ML, Cruz-Bautista I, Aguilar-Salinas CA, Tontonoz P, Pajukanta P. The N342S MYLIP polymorphism is associated with high total cholesterol and increased LDL receptor degradation in humans. The Journal of Clinical Investigation. 121: 3062-71. PMID 21765216 DOI: 10.1172/JCI45504  0.44
2011 Bocklandt S, Lin W, Sehl ME, Sánchez FJ, Sinsheimer JS, Horvath S, Vilain E. Epigenetic predictor of age. Plos One. 6: e14821. PMID 21731603 DOI: 10.1371/journal.pone.0014821  0.44
2011 Zhou JJ, Pelka S, Lange K, Palmer CG, Sinsheimer JS. Dissecting prenatal, postnatal, and inherited effects: ART and design. Genetic Epidemiology. 35: 437-46. PMID 21638309 DOI: 10.1002/gepi.20591  0.44
2011 Zhou H, Alexander DH, Sehl ME, Sinsheimer JS, Sobel EM, Lange K. Penalized regression for genome-wide association screening of sequence data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 106-17. PMID 21121038  0.44
2011 Rhodes SL, Sinsheimer JS, Bordelon Y, Bronstein JM, Ritz B. Replication of GWAS associations for GAK and MAPT in Parkinson's disease. Annals of Human Genetics. 75: 195-200. PMID 21058943 DOI: 10.1111/j.1469-1809.2010.00616.x  0.44
2010 Tom JA, Sinsheimer JS, Suchard MA. Reuse, Recycle, Reweigh: Combating Influenza through Efficient Sequential Bayesian Computation for Massive Data. The Annals of Applied Statistics. 4: 1722-1748. PMID 26681992 DOI: 10.1214/10-AOAS349  0.44
2010 Sinsheimer JS, Elston RC, Fu WJ. Gene-gene interaction in maternal and perinatal research. Journal of Biomedicine & Biotechnology. 2010. PMID 20798776 DOI: 10.1155/2010/853612  0.44
2010 Zhou H, Sehl ME, Sinsheimer JS, Lange K. Association screening of common and rare genetic variants by penalized regression. Bioinformatics (Oxford, England). 26: 2375-82. PMID 20693321 DOI: 10.1093/bioinformatics/btq448  0.44
2010 Childs EJ, Palmer CG, Lange K, Sinsheimer JS. Modeling maternal-offspring gene-gene interactions: the extended-MFG test. Genetic Epidemiology. 34: 512-21. PMID 20552637 DOI: 10.1002/gepi.20508  0.44
2010 Boudreault P, Baldwin EE, Fox M, Dutton L, Tullis L, Linden J, Kobayashi Y, Zhou J, Sinsheimer JS, Sininger Y, Grody WW, Palmer CG. Deaf adults' reasons for genetic testing depend on cultural affiliation: results from a prospective, longitudinal genetic counseling and testing study. Journal of Deaf Studies and Deaf Education. 15: 209-27. PMID 20488870 DOI: 10.1093/deafed/enq012  0.44
2010 van Nas A, Ingram-Drake L, Sinsheimer JS, Wang SS, Schadt EE, Drake T, Lusis AJ. Expression quantitative trait loci: replication, tissue- and sex-specificity in mice. Genetics. 185: 1059-68. PMID 20439777 DOI: 10.1534/genetics.110.116087  0.44
2010 Weissglas-Volkov D, Aguilar-Salinas CA, Sinsheimer JS, Riba L, Huertas-Vazquez A, Ordoñez-Sánchez ML, Rodriguez-Guillen R, Cantor RM, Tusie-Luna T, Pajukanta P. Investigation of variants identified in caucasian genome-wide association studies for plasma high-density lipoprotein cholesterol and triglycerides levels in Mexican dyslipidemic study samples. Circulation. Cardiovascular Genetics. 3: 31-8. PMID 20160193 DOI: 10.1161/CIRCGENETICS.109.908004  0.44
2010 Cantor RM, Lange K, Sinsheimer JS. Prioritizing GWAS results: A review of statistical methods and recommendations for their application. American Journal of Human Genetics. 86: 6-22. PMID 20074509 DOI: 10.1016/j.ajhg.2009.11.017  0.44
2010 Weissglas-Volkov D, Plaisier CL, Huertas-Vazquez A, Cruz-Bautista I, Riaño-Barros D, Herrera-Hernandez M, Riba L, Cantor RM, Sinsheimer JS, Aguilar-Salinas CA, Tusie-Luna T, Pajukanta P. Identification of two common variants contributing to serum apolipoprotein B levels in Mexicans. Arteriosclerosis, Thrombosis, and Vascular Biology. 30: 353-9. PMID 19965785 DOI: 10.1161/ATVBAHA.109.196402  0.44
2009 Sehl ME, Sinsheimer JS, Zhou H, Lange KL. Differential destruction of stem cells: implications for targeted cancer stem cell therapy. Cancer Research. 69: 9481-9. PMID 19996291 DOI: 10.1158/0008-5472.CAN-09-2070  0.44
2009 Bonneaud C, Sinsheimer JS, Richard M, Chastel O, Sorci G. Mhc polymorphisms fail to explain the heritability of phytohaemagglutinin-induced skin swelling in a wild passerine. Biology Letters. 5: 784-7. PMID 19671600 DOI: 10.1098/rsbl.2009.0435  0.44
2009 Meex SJ, Weissglas-Volkov D, van der Kallen CJ, Thuerauf DJ, van Greevenbroek MM, Schalkwijk CG, Stehouwer CD, Feskens EJ, Heldens L, Ayoubi TA, Hofker MH, Wouters BG, Vlietinck R, Sinsheimer JS, Taskinen MR, et al. The ATF6-Met[67]Val substitution is associated with increased plasma cholesterol levels. Arteriosclerosis, Thrombosis, and Vascular Biology. 29: 1322-7. PMID 19667116 DOI: 10.1161/ATVBAHA.108.180240  0.44
2009 Crandall CJ, Sehl ME, Crawford SL, Gold EB, Habel LA, Butler LM, Sowers MR, Greendale GA, Sinsheimer JS. Sex steroid metabolism polymorphisms and mammographic density in pre- and early perimenopausal women. Breast Cancer Research : Bcr. 11: R51. PMID 19630952 DOI: 10.1186/bcr2340  0.44
2009 Zhou JJ, Lange K, Papp JC, Sinsheimer JS. A heterozygote-homozygote test of Hardy-Weinberg equilibrium. European Journal of Human Genetics : Ejhg. 17: 1495-500. PMID 19367317 DOI: 10.1038/ejhg.2009.57  0.44
2009 Sehl ME, Langer LR, Papp JC, Kwan L, Seldon JL, Arellano G, Reiss J, Reed EF, Dandekar S, Korin Y, Sinsheimer JS, Zhang ZF, Ganz PA. Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 15: 2192-203. PMID 19276285 DOI: 10.1158/1078-0432.CCR-08-1417  0.44
2009 Plaisier CL, Kyttälä M, Weissglas-Volkov D, Sinsheimer JS, Huertas-Vazquez A, Riba L, Ramírez-Jiménez S, de Bruin TW, Tusié-Luna T, Aouizerat BE, Pullinger CR, Malloy MJ, Kane JP, Cruz-Bautista I, Herrera MF, et al. Galanin preproprotein is associated with elevated plasma triglycerides. Arteriosclerosis, Thrombosis, and Vascular Biology. 29: 147-52. PMID 18988886 DOI: 10.1161/ATVBAHA.108.178533  0.44
2009 Bauman LE, Sinsheimer JS, Sobel EM, Lange K. Mixed effects models for quantitative trait loci mapping with inbred strains (Genetics 180, (1743-1761)) Genetics. 182: 411.  0.44
2008 Bauman LE, Sinsheimer JS, Sobel EM, Lange K. Mixed effects models for quantitative trait loci mapping with inbred strains. Genetics. 180: 1743-61. PMID 18791243 DOI: 10.1534/genetics.108.091058  0.44
2008 Palmer CG, Mallery E, Turunen JA, Hsieh HJ, Peltonen L, Lonnqvist J, Woodward JA, Sinsheimer JS. Effect of Rhesus D incompatibility on schizophrenia depends on offspring sex. Schizophrenia Research. 104: 135-45. PMID 18692992 DOI: 10.1016/j.schres.2008.06.022  0.44
2008 Nikolova G, Sinsheimer JS, Eicher EM, Vilain E. The chromosome 11 region from strain 129 provides protection from sex reversal in XYPOS mice. Genetics. 179: 419-27. PMID 18458101 DOI: 10.1534/genetics.108.088088  0.44
2008 Seitzman RL, Mahajan VB, Mangione C, Cauley JA, Ensrud KE, Stone KL, Cummings SR, Hochberg MC, Hillier TA, Sinsheimer JS, Yu F, Coleman AL. Estrogen receptor alpha and matrix metalloproteinase 2 polymorphisms and age-related maculopathy in older women. American Journal of Epidemiology. 167: 1217-25. PMID 18359774 DOI: 10.1093/aje/kwn024  0.44
2008 Sinsheimer JS, Plaisier CL, Huertas-Vazquez A, Aguilar-Salinas C, Tusie-Luna T, Pajukanta P, Lange K. Estimating ethnic admixture from pedigree data. American Journal of Human Genetics. 82: 748-55. PMID 18319077 DOI: 10.1016/j.ajhg.2007.12.014  0.44
2007 Hsieh HJ, Palmer CG, Harney S, Chen HW, Bauman L, Brown MA, Sinsheimer JS. Using the maternal-fetal genotype incompatibility test to assess non-inherited maternal HLA-DRB1 antigen coding alleles as rheumatoid arthritis risk factors. Bmc Proceedings. 1: S124. PMID 18466466  0.44
2007 Lee JC, Weissglas-Volkov D, Kyttälä M, Sinsheimer JS, Jokiaho A, de Bruin TW, Lusis AJ, Brennan ML, van Greevenbroek MM, van der Kallen CJ, Hazen SL, Pajukanta P. USF1 contributes to high serum lipid levels in Dutch FCHL families and U.S. whites with coronary artery disease. Arteriosclerosis, Thrombosis, and Vascular Biology. 27: 2222-7. PMID 17673701 DOI: 10.1161/ATVBAHA.107.151530  0.44
2007 Wahner AD, Sinsheimer JS, Bronstein JM, Ritz B. Inflammatory cytokine gene polymorphisms and increased risk of Parkinson disease. Archives of Neurology. 64: 836-40. PMID 17562931 DOI: 10.1001/archneur.64.6.836  0.44
2007 Loughlin J, Meulenbelt I, Min J, Mustafa Z, Sinsheimer JS, Carr A, Slagboom PE. Genetic association analysis of RHOB and TXNDC3 in osteoarthritis. American Journal of Human Genetics. 80: 383-6; author reply . PMID 17304710 DOI: 10.1086/511443  0.44
2007 Snelling S, Sinsheimer JS, Carr A, Loughlin J. Genetic association analysis of LRCH1 as an osteoarthritis susceptibility locus. Rheumatology (Oxford, England). 46: 250-2. PMID 16891653 DOI: 10.1093/rheumatology/kel265  0.44
2006 Hsieh HJ, Palmer CG, Sinsheimer JS. Allowing for missing data at highly polymorphic genes when testing for maternal, offspring and maternal-fetal genotype incompatibility effects. Human Heredity. 62: 165-74. PMID 17065817 DOI: 10.1159/000096444  0.44
2006 Kim S, Kim Y, Liang T, Sinsheimer JS, Chow SA. A high-throughput method for cloning and sequencing human immunodeficiency virus type 1 integration sites. Journal of Virology. 80: 11313-21. PMID 16971446 DOI: 10.1128/JVI.01737-06  0.44
2006 Palmer CG, Hsieh HJ, Reed EF, Lonnqvist J, Peltonen L, Woodward JA, Sinsheimer JS. HLA-B maternal-fetal genotype matching increases risk of schizophrenia. American Journal of Human Genetics. 79: 710-5. PMID 16960807 DOI: 10.1086/507829  0.44
2006 Minassian SL, Palmer CG, Turunen JA, Paunio T, Lönnqvist J, Peltonen L, Woodward JA, Sinsheimer JS. Incorporating serotypes into family based association studies using the MFG test. Annals of Human Genetics. 70: 541-53. PMID 16759185 DOI: 10.1111/j.1469-1809.2005.00243.x  0.44
2006 Hsieh HJ, Palmer CG, Harney S, Newton JL, Wordsworth P, Brown MA, Sinsheimer JS. The v-MFG test: investigating maternal, offspring and maternal-fetal genetic incompatibility effects on disease and viability. Genetic Epidemiology. 30: 333-47. PMID 16607625 DOI: 10.1002/gepi.20148  0.44
2006 Chapman K, Carr A, Loughlin J, Sinsheimer JS. Presence of a primary hip osteoarthritis susceptibility locus on chromosome 6: comment on the article by Meenagh et al. Arthritis and Rheumatism. 54: 1026-7. PMID 16508987 DOI: 10.1002/art.21676  0.44
2006 Loughlin J, Sinsheimer JS, Carr A, Chapman K. The CALM1 core promoter polymorphism is not associated with hip osteoarthritis in a United Kingdom Caucasian population. Osteoarthritis and Cartilage / Oars, Osteoarthritis Research Society. 14: 295-8. PMID 16359877 DOI: 10.1016/j.joca.2005.11.001  0.44
2005 Mustafa Z, Dowling B, Chapman K, Sinsheimer JS, Carr A, Loughlin J. Investigating the aspartic acid (D) repeat of asporin as a risk factor for osteoarthritis in a UK Caucasian population. Arthritis and Rheumatism. 52: 3502-6. PMID 16255042 DOI: 10.1002/art.21399  0.44
2005 Bauman LE, Almasy L, Blangero J, Duggirala R, Sinsheimer JS, Lange K. Fishing for pleiotropic QTLs in a polygenic sea. Annals of Human Genetics. 69: 590-611. PMID 16138917 DOI: 10.1111/j.1529-8817.2005.00181.x  0.44
2005 Suchard MA, Weiss RE, Sinsheimer JS. Models for estimating bayes factors with applications to phylogeny and tests of monophyly. Biometrics. 61: 665-73. PMID 16135017 DOI: 10.1111/j.1541-0420.2005.00352.x  0.44
2005 Lange K, Sinsheimer JS, Sobel E. Association testing with Mendel. Genetic Epidemiology. 29: 36-50. PMID 15834862 DOI: 10.1002/gepi.20073  0.44
2005 McKenzie CA, Sinsheimer JS, Adeyemo AA, Cox RD, Southam L, Hugill A, Bouzekri N, Lathrop M, Forrester TE, Cooper RS, Ward R. SNP haplotypes in the angiotensin I-converting enzyme (ACE) gene: analysis of Nigerian family data using gamete competition models. Annals of Human Genetics. 69: 227-32. PMID 15720304 DOI: 10.1046/j.1529-8817.2004.00142.x  0.44
2005 Minassian SL, Palmer CG, Sinsheimer JS. An exact maternal-fetal genotype incompatibility (MFG) test. Genetic Epidemiology. 28: 83-95. PMID 15368616 DOI: 10.1002/gepi.20027  0.44
2004 Lange K, Sinsheimer JS. The pedigree trimming problem. Human Heredity. 58: 108-11. PMID 15711090 DOI: 10.1159/000083031  0.44
2004 Fang G, Kuiken C, Weiser B, Rowland-Jones S, Plummer F, Chen CH, Kaul R, Anzala AO, Bwayo J, Kimani J, Philpott SM, Kitchen C, Sinsheimer JS, Gaschen B, Lang D, et al. Long-term survivors in Nairobi: complete HIV-1 RNA sequences and immunogenetic associations. The Journal of Infectious Diseases. 190: 697-701. PMID 15272396 DOI: 10.1086/421504  0.44
2004 Mar R, Pajukanta P, Allayee H, Groenendijk M, Dallinga-Thie G, Krauss RM, Sinsheimer JS, Cantor RM, de Bruin TW, Lusis AJ. Association of the APOLIPOPROTEIN A1/C3/A4/A5 gene cluster with triglyceride levels and LDL particle size in familial combined hyperlipidemia. Circulation Research. 94: 993-9. PMID 15001527 DOI: 10.1161/01.RES.0000124922.61830.F0  0.44
2004 Pajukanta P, Lilja HE, Sinsheimer JS, Cantor RM, Lusis AJ, Gentile M, Duan XJ, Soro-Paavonen A, Naukkarinen J, Saarela J, Laakso M, Ehnholm C, Taskinen MR, Peltonen L. Familial combined hyperlipidemia is associated with upstream transcription factor 1 (USF1). Nature Genetics. 36: 371-6. PMID 14991056 DOI: 10.1038/ng1320  0.44
2004 Kraft P, Palmer CG, Woodward AJ, Turunen JA, Minassian S, Paunio T, Lönnqvist J, Peltonen L, Sinsheimer JS. RHD maternal-fetal genotype incompatibility and schizophrenia: extending the MFG test to include multiple siblings and birth order. European Journal of Human Genetics : Ejhg. 12: 192-8. PMID 14735156 DOI: 10.1038/sj.ejhg.5201129  0.44
2004 Dorman KS, Sinsheimer JS, Lange K. In the garden of branching processes Siam Review. 46: 202-229. DOI: 10.1137/S0036144502417843  0.44
2003 Sinsheimer JS, Suchard MA, Dorman KS, Fang F, Weiss RE. Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains. Applied Bioinformatics. 2: 131-44. PMID 15130798  0.44
2003 Suchard MA, Kitchen CM, Sinsheimer JS, Weiss RE. Hierarchical phylogenetic models for analyzing multipartite sequence data. Systematic Biology. 52: 649-64. PMID 14530132 DOI: 10.1080/10635150390238879  0.44
2003 Duncan EL, Cardon LR, Sinsheimer JS, Wass JA, Brown MA. Site and gender specificity of inheritance of bone mineral density. Journal of Bone and Mineral Research : the Official Journal of the American Society For Bone and Mineral Research. 18: 1531-8. PMID 12929944 DOI: 10.1359/jbmr.2003.18.8.1531  0.44
2003 Suchard MA, Weiss RE, Sinsheimer JS. Testing a molecular clock without an outgroup: derivations of induced priors on branch-length restrictions in a Bayesian framework. Systematic Biology. 52: 48-54. PMID 12554439  0.44
2003 Sinsheimer JS, Palmer CG, Woodward JA. Detecting genotype combinations that increase risk for disease: maternal-fetal genotype incompatibility test. Genetic Epidemiology. 24: 1-13. PMID 12508251 DOI: 10.1002/gepi.10211  0.44
2003 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Inferring spatial phylogenetic variation along nucleotide sequences: A multiple changepoint model Journal of the American Statistical Association. 98: 427-437. DOI: 10.1198/016214503000215  0.44
2003 Suchard MA, Weiss RE, Sinsheimer JS, Dorman KS, Patel M, McCabe ERB. Evolutionary Similarity Among Genes Journal of the American Statistical Association. 98: 653-662. DOI: 10.1198/016214503000000558  0.44
2002 Palmer CG, Turunen JA, Sinsheimer JS, Minassian S, Paunio T, Lönnqvist J, Peltonen L, Woodward JA. RHD maternal-fetal genotype incompatibility increases schizophrenia susceptibility. American Journal of Human Genetics. 71: 1312-9. PMID 12439825 DOI: 10.1086/344659  0.44
2002 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage. Systematic Biology. 51: 715-28. PMID 12396586 DOI: 10.1080/10635150290102384  0.44
2002 Schadt EE, Sinsheimer JS, Lange K. Applications of codon and rate variation models in molecular phylogeny. Molecular Biology and Evolution. 19: 1550-62. PMID 12200482  0.44
2002 Auranen M, Vanhala R, Varilo T, Ayers K, Kempas E, Ylisaukko-Oja T, Sinsheimer JS, Peltonen L, Järvelä I. A genomewide screen for autism-spectrum disorders: evidence for a major susceptibility locus on chromosome 3q25-27. American Journal of Human Genetics. 71: 777-90. PMID 12192642 DOI: 10.1086/342720  0.44
2002 Dorman KS, Kaplan AH, Sinsheimer JS. Bootstrap confidence levels for HIV-1 recombination. Journal of Molecular Evolution. 54: 200-9. PMID 11821913 DOI: 10.1007/s00239-001-0002-4  0.44
2001 Sinsheimer JS, Mckenzie CA, Keavney B, Lange K. SNPs and snails and puppy dogs' tail: Analysis of SNP haplotype data using the gamete competition model Annals of Human Genetics. 65: 483-490. PMID 11806856  0.44
2001 Suchard MA, Bailey JN, Elashoff DA, Sinsheimer JS. SNPing away at candidate genes Genetic Epidemiology. 21: S643-S648. PMID 11793754  0.44
2001 Ekelund J, Hovatta I, Parker A, Paunio T, Varilo T, Martin R, Suhonen J, Ellonen P, Chan G, Sinsheimer JS, Sobel E, Juvonen H, Arajärvi R, Partonen T, Suvisaari J, et al. Chromosome 1 loci in Finnish schizophrenia families Human Molecular Genetics. 10: 1611-1617. PMID 11468279  0.44
2001 Suchard MA, Weiss RE, Sinsheimer JS. Bayesian selection of continuous-time Markov chain evolutionary models. Molecular Biology and Evolution. 18: 1001-13. PMID 11371589  0.44
2001 Pajukanta P, Bodnar JS, Sallinen R, Chu M, Airaksinen T, Xiao Q, Castellani LW, Sheth SS, Wessman M, Palotie A, Sinsheimer JS, Demant P, Lusis AJ, Peltonen L. Fine mapping of Hyplip1 and the human homolog, a potential locus for FCHL. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 12: 238-45. PMID 11252174 DOI: 10.1007/s003350010265  0.44
2001 Patel M, Dorman KS, Zhang YH, Huang BL, Arnold AP, Sinsheimer JS, Vilain E, McCabe ER. Primate DAX1, SRY, and SOX9: evolutionary stratification of sex-determination pathway. American Journal of Human Genetics. 68: 275-80. PMID 11112659 DOI: 10.1086/316932  0.44
2000 Dorman KS, Kaplan AH, Lange K, Sinsheimer JS. Mutation takes no vacation: Can structured treatment interruptions increase the risk of drug-resistant HIV-1? Journal of Acquired Immune Deficiency Syndromes. 25: 398-402. PMID 11141239  0.44
2000 Chitnavis J, Sinsheimer JS, Suchard MA, Clipsham K, Carr AJ. End-stage coxarthrosis and gonarthrosis. Aetiology, clinical patterns and radiological features of idiopathic osteoarthritis Rheumatology. 39: 612-619. PMID 10888705  0.44
2000 Loughlin J, Mustafa Z, Smith A, Irven C, Carr AJ, Clipsham K, Chitnavis J, Bloomfield VA, McCartney M, Cox O, Sinsheimer JS, Sykes B, Chapman KE. Linkage analysis of chromosome 2q in osteoarthritis. Rheumatology (Oxford, England). 39: 377-81. PMID 10817769  0.44
2000 Mustafa Z, Chapman K, Irven C, Carr AJ, Clipsham K, Chitnavis J, Sinsheimer JS, Bloomfield VA, McCartney M, Cox O, Sykes B, Loughlin J. Linkage analysis of candidate genes as susceptibility loci for osteoarthritis-suggestive linkage of COL9A1 to female hip osteoarthritis. Rheumatology (Oxford, England). 39: 299-306. PMID 10788539  0.44
2000 Loughlin J, Sinsheimer JS, Mustafa Z, Carr AJ, Clipsham K, Bloomfield VA, Chitnavis J, Bailey A, Sykes B, Chapman K. Association analysis of the vitamin D receptor gene, the type I collagen gene COL1A1, and the estrogen receptor gene in idiopathic osteoarthritis. The Journal of Rheumatology. 27: 779-84. PMID 10743824  0.44
2000 Sinsheimer JS, Blangero J, Lange K. Gamete-competition models American Journal of Human Genetics. 66: 1168-1172. PMID 10712230 DOI: 10.1086/302826  0.44
2000 Ekelund J, Hovatta I, Parker A, Varilo T, Paunio T, Martin R, Suhonen J, Terwilliger JD, Sinsheimer JS, Suvisaari J, Ellonen P, Maruti S, Juvorien H, Arajärvi R, Partonen T, et al. Fine-mapping of a 40 CM region on chromosome 1q in schizophrenia American Journal of Medical Genetics - Neuropsychiatric Genetics. 96: 461.  0.44
1999 Pérez C C, Vial C P, Dorman KS, Wang G, Abarca V K, Sinsheimer JS, Kaplan AH. Molecular epidemiology of the human immunodeficiency virus tipe 1 in Santiago, Chile | Epidemiología molecular del virus de inmunodeficiencia humana tipo 1 en Santiago, Chile Revista Medica De Chile. 127: 1294-1304. PMID 10835715  0.44
1999 Suchard MA, Yudkin P, Sinsheimer JS, Fowler GH. General practitioners' views on genetic screening for common diseases British Journal of General Practice. 49: 45-46. PMID 10622017  0.44
1999 Bailey JN, Suchard MA, Smalley SL, Sinsheimer JS. Search for a gene x environment interaction: G x E hunt Genetic Epidemiology. 17: S491-S496. PMID 10597481  0.44
1999 Palmer CG, Bailey JN, Ramsey C, Cantwell D, Sinsheimer JS, Del'Homme M, McGough J, Woodward JA, Asarnow R, Asarnow J, Nelson S, Smalley SL. No evidence of linkage or linkage disequilibrium between DAT1 and attention deficit hyperactivity disorder in a large sample. Psychiatric Genetics. 9: 157-60. PMID 10551548  0.44
1999 Chapman K, Mustafa Z, Irven C, Carr AJ, Clipsham K, Smith A, Chitnavis J, Sinsheimer JS, Bloomfield VA, McCartney M, Cox O, Cardon LR, Sykes B, Loughlin J. Osteoarthritis-susceptibility locus on chromosome 11q, detected by linkage. American Journal of Human Genetics. 65: 167-74. PMID 10364529 DOI: 10.1086/302465  0.44
1999 Plaeger S, Bermudez S, Mikyas Y, Harawa N, Dickover R, Mark D, Dillon M, Bryson YJ, Boyer PJ, Sinsheimer JS. Decreased CD8 cell-mediated viral suppression and other immunologic characteristics of women who transmit human immunodeficiency virus to their infants. The Journal of Infectious Diseases. 179: 1388-94. PMID 10228059 DOI: 10.1086/314746  0.44
1999 Suchard MA, Yudkin P, Sinsheimer JS. Are general practitioners willing and able to provide genetic services for common diseases? Journal of Genetic Counseling. 8: 301-311. DOI: 10.1023/A:1022934316284  0.44
1998 Schadt EE, Sinsheimer JS, Lange K. Computational advances in maximum likelihood methods for molecular phylogeny Genome Research. 8: 222-233. PMID 9521926  0.44
1998 Weeks DE, Sinsheimer JS, Genin E, Clerget-Darpoux F. Consanguinity and relative-pair methods for linkage analysis [7] (multiple letters) American Journal of Human Genetics. 62: 728-733. PMID 9497239 DOI: 10.1086/301742  0.44
1997 Chitnavis J, Sinsheimer JS, Clipsham K, Loughlin J, Sykes B, Burge PD, Carr AJ. Genetic influences in end-stage osteoarthritis. Sibling risks of hip and knee replacement for idiopathic osteoarthritis Journal of Bone and Joint Surgery - Series B. 79: 660-664. PMID 9250761 DOI: 10.1302/0301-620X.79B4.7437  0.44
1997 Sinsheimer JS, Lake JA, Little RJA. Inference for phylogenies under a hybrid parsimony method: Evolutionary- symmetric transversion parsimony Biometrics. 53: 23-38. PMID 9147592 DOI: 10.2307/2533094  0.44
1996 Sinsheimer JS, Lake JA, Little RJA. Bayesian hypothesis testing of four-taxon topologies using molecular sequence data Biometrics. 52: 193-210. PMID 8934592 DOI: 10.2307/2533156  0.44
1996 Lech WJ, Wang G, Yang YL, Chee Y, Dorman K, Mccrae D, Lazzeroni LC, Erickson JW, Sinsheimer JS, Kaplan AH. In vivo sequence diversity of the protease of human immunodeficiency virus type 1: Presence of protease inhibitor-resistant variants in untreated subjects Journal of Virology. 70: 2038-2043. PMID 8627733  0.44
1993 Lange K, Sinsheimer JS. Normal/independent distributions and their applications in robust regression Journal of Computational and Graphical Statistics. 2: 175-198. DOI: 10.1080/10618600.1993.10474606  0.44
1992 Lange K, Sinsheimer JS. Calculation of genetic identity coefficients Annals of Human Genetics. 56: 339-346. PMID 1492748  0.44
1991 Macaya RF, Gilbert DE, Malek S, Sinsheimer JS, Feigon J. Structure and stability of X.G.C mismatches in the third strand of intramolecular triplexes. Science (New York, N.Y.). 254: 270-4. PMID 1925581  0.44
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