Nikesh Kotecha, Ph.D. - Publications

Affiliations: 
2008 Stanford University, Palo Alto, CA 
Area:
Immunology, Computer Science, Bioinformatics Biology

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Karr JR, Guturu H, Chen EY, Blair SL, Irish JM, Kotecha N, Covert MW. NetworkPainter: dynamic intracellular pathway animation in Cytobank. Bmc Bioinformatics. 16: 172. PMID 26003204 DOI: 10.1186/S12859-015-0602-4  0.585
2014 Chen TJ, Kotecha N. Cytobank: providing an analytics platform for community cytometry data analysis and collaboration. Current Topics in Microbiology and Immunology. 377: 127-57. PMID 24590675 DOI: 10.1007/82_2014_364  0.528
2014 Chen TJ, Kotecha N. Revealing the Immune Population Hierarchy Using Novel Interactive Visualization Tools, a Comparison of Methods: Sunburst, viSNE, and Spade on Mass Cytometry Data Blood. 124: 5122-5122. DOI: 10.1182/Blood.V124.21.5122.5122  0.432
2012 Spidlen J, Breuer K, Rosenberg C, Kotecha N, Brinkman RR. FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 81: 727-31. PMID 22887982 DOI: 10.1002/Cyto.A.22106  0.433
2010 Kotecha N, Krutzik PO, Irish JM. Web-based analysis and publication of flow cytometry experiments. Current Protocols in Cytometry / Editorial Board, J. Paul Robinson, Managing Editor ... [Et Al.]. Unit10.17. PMID 20578106 DOI: 10.1002/0471142956.Cy1017S53  0.673
2009 Hammer MM, Kotecha N, Irish JM, Nolan GP, Krutzik PO. WebFlow: a software package for high-throughput analysis of flow cytometry data. Assay and Drug Development Technologies. 7: 44-55. PMID 19187010 DOI: 10.1089/Adt.2008.174  0.678
2008 Kotecha N, Flores NJ, Irish JM, Simonds EF, Sakai DS, Archambeault S, Diaz-Flores E, Coram M, Shannon KM, Nolan GP, Loh ML. Single-cell profiling identifies aberrant STAT5 activation in myeloid malignancies with specific clinical and biologic correlates. Cancer Cell. 14: 335-43. PMID 18835035 DOI: 10.1016/J.Ccr.2008.08.014  0.673
2008 Kotecha N, Bruck K, Lu W, Shah N. Pathway knowledge base: An integrated pathway resource using BioPAX Applied Ontology. 3: 235-245. DOI: 10.3233/Ao-2008-0054  0.376
2007 Van Meter ME, Díaz-Flores E, Archard JA, Passegué E, Irish JM, Kotecha N, Nolan GP, Shannon K, Braun BS. K-RasG12D expression induces hyperproliferation and aberrant signaling in primary hematopoietic stem/progenitor cells. Blood. 109: 3945-52. PMID 17192389 DOI: 10.1182/Blood-2006-09-047530  0.628
2007 Kotecha N, Flores NJ, Irish JM, Sakaguchi D, Archambeault S, Diaz-Flores E, Coram M, Shannon KM, Nolan GP, Loh ML. A Novel Assay for Juvenile Myelomonocytic Leukemia Based on Aberrant Signaling Networks Measured Via Phospho-Specific Flow Cytometry Reduces Diagnosis Time from Weeks to Days. Blood. 110: 546-546. DOI: 10.1182/Blood.V110.11.546.546  0.675
2006 Irish JM, Kotecha N, Nolan GP. Mapping normal and cancer cell signalling networks: towards single-cell proteomics. Nature Reviews. Cancer. 6: 146-55. PMID 16491074 DOI: 10.1038/Nrc1804  0.655
2005 Van Meter ME, Diaz-Flores E, Archard JA, Kotecha N, Sabnis AJ, Irish JM, Nolan GP, Shannon KM, Braun BS. Multiparameter Flow Cytometric Analysis Reveals Aberrant Phosphorylation of a Network of Effector Molecules in Defined Populations of Kras Mutant Bone Marrow. Blood. 106: 239-239. DOI: 10.1182/Blood.V106.11.239.239  0.621
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