| Year |
Citation |
Score |
| 2023 |
Mooren OL, Stuchell-Brereton MD, McConnell P, Yan C, Wilkerson EM, Goldfarb D, Cooper JA, Sept D, Soranno A. Biophysical Mechanism of Allosteric Regulation of Actin Capping Protein. Journal of Molecular Biology. 168342. PMID 37924863 DOI: 10.1016/j.jmb.2023.168342 |
0.309 |
|
| 2023 |
Mooren OL, Stuchell-Brereton MD, McConnell P, Yan C, Wilkerson EM, Goldfarb D, Cooper JA, Sept D, Soranno A. Biophysical Mechanism of Allosteric Regulation of Actin Capping Protein. Biorxiv : the Preprint Server For Biology. PMID 37645735 DOI: 10.1101/2023.08.16.553570 |
0.302 |
|
| 2020 |
Jepsen L, Sept D. Effects of Nucleotide and End-Dependent Actin Conformations on Polymerization. Biophysical Journal. PMID 33080221 DOI: 10.1016/j.bpj.2020.09.024 |
0.332 |
|
| 2019 |
Budaitis BG, Jariwala S, Reinemann DN, Schimert KI, Scarabelli G, Grant BJ, Sept D, Lang MJ, Verhey KJ. Neck linker docking is critical for Kinesin-1 force generation in cells but at a cost to motor speed and processivity. Elife. 8. PMID 31084716 DOI: 10.7554/Elife.44146 |
0.306 |
|
| 2019 |
Jepsen L, Sept D. Molecular Dynamics Simulations of G- and F-Actin Explain Aspects of Actin Polymerization Biophysical Journal. 116: 456a. DOI: 10.1016/J.Bpj.2018.11.2461 |
0.374 |
|
| 2018 |
Chaaban S, Jariwala S, Hsu CT, Redemann S, Kollman JM, Müller-Reichert T, Sept D, Bui KH, Brouhard GJ. The Structure and Dynamics of C. elegans Tubulin Reveals the Mechanistic Basis of Microtubule Growth. Developmental Cell. PMID 30245157 DOI: 10.2210/Pdb6E88/Pdb |
0.347 |
|
| 2018 |
Chen C, Cummings R, Mordovanakis A, Hunt AJ, Mayer M, Sept D, Yamashita YM. Cytokine receptor-Eb1 interaction couples cell polarity and fate during asymmetric cell division. Elife. 7. PMID 29578412 DOI: 10.7554/Elife.33685 |
0.306 |
|
| 2018 |
Jepsen L, Sept D. Nucleotide and Polymerization Effects on the Structure and Dynamics of Actin Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.797 |
0.387 |
|
| 2017 |
Krtková J, Xu J, Lalle M, Steele-Ogus M, Alas GCM, Sept D, Paredez AR. 14-3-3 Regulates Actin Filament Formation in the Deep-Branching Eukaryote Giardia lamblia. Msphere. 2. PMID 28932813 DOI: 10.1128/mSphere.00248-17 |
0.327 |
|
| 2017 |
Castle BT, McCubbin S, Prahl LS, Bernens JN, Sept D, Odde DJ. Mechanisms of kinetic stabilization by the drugs paclitaxel and vinblastine. Molecular Biology of the Cell. PMID 28298489 DOI: 10.1091/Mbc.E16-08-0567 |
0.385 |
|
| 2017 |
Jepsen L, Sept D. The Effects of Nucleotide and Polymerization on the Structure and Dynamics of Actin Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.3028 |
0.387 |
|
| 2016 |
Jepsen L, Kruth KA, Rubenstein PA, Sept D. Two Deafness-Causing Actin Mutations (DFNA20/26) Have Allosteric Effects on the Actin Structure. Biophysical Journal. 111: 323-32. PMID 27463135 DOI: 10.1016/J.Bpj.2016.06.012 |
0.383 |
|
| 2016 |
Jepsen L, Kruth K, Rubenstein P, Sept D. Molecular Effects of Deafness Mutations in Actin Biophysical Journal. 110: 354a. DOI: 10.1016/J.Bpj.2015.11.1909 |
0.368 |
|
| 2015 |
Gartz Hanson M, Aiken J, Sietsema DV, Sept D, Bates EA, Niswander L, Moore JK. Novel α-tubulin mutation disrupts neural development and tubulin proteostasis. Developmental Biology. PMID 26658218 DOI: 10.1016/J.Ydbio.2015.11.022 |
0.314 |
|
| 2014 |
Edwards M, Zwolak A, Schafer DA, Sept D, Dominguez R, Cooper JA. Capping protein regulators fine-tune actin assembly dynamics. Nature Reviews. Molecular Cell Biology. 15: 677-89. PMID 25207437 DOI: 10.1038/Nrm3869 |
0.43 |
|
| 2014 |
Sept D, Carlsson AE. Modeling large-scale dynamic processes in the cell: polarization, waves, and division. Quarterly Reviews of Biophysics. 47: 221-48. PMID 25124728 DOI: 10.1017/S0033583514000079 |
0.329 |
|
| 2014 |
Aiken J, Sept D, Costanzo M, Boone C, Cooper JA, Moore JK. Genome-wide analysis reveals novel and discrete functions for tubulin carboxy-terminal tails. Current Biology : Cb. 24: 1295-303. PMID 24835459 DOI: 10.1016/J.Cub.2014.03.078 |
0.325 |
|
| 2014 |
Edwards M, Zwolak A, Schafer DA, Sept D, Dominguez R, Cooper JA. Erratum: Capping protein regulators fine-tune actin assembly dynamics Nature Reviews Molecular Cell Biology. 15: 760-760. DOI: 10.1038/Nrm3887 |
0.342 |
|
| 2014 |
Jepsen L, Diraviyam K, Sept D. The Structure of Actin Biophysical Journal. 106: 165a. DOI: 10.1016/J.Bpj.2013.11.941 |
0.38 |
|
| 2014 |
Bruhn BR, Yusko EC, Eggenberger O, Rollings RC, Walsh NC, Pindrus M, Sept D, Li J, Kalonia DS, Mayer M. Characterizing Shape, Dipole Moment, and Rotation of Single Proteins in Nanopores Biophysical Journal. 106: 214a. DOI: 10.1016/J.Bpj.2013.11.1253 |
0.307 |
|
| 2013 |
Saxena A, Sept D. Multisite Ion Models That Improve Coordination and Free Energy Calculations in Molecular Dynamics Simulations. Journal of Chemical Theory and Computation. 9: 3538-42. PMID 26584110 DOI: 10.1021/Ct400177G |
0.315 |
|
| 2013 |
Ma CI, Diraviyam K, Maier ME, Sept D, Sibley LD. Synthetic chondramide A analogues stabilize filamentous actin and block invasion by Toxoplasma gondii. Journal of Natural Products. 76: 1565-72. PMID 24020843 DOI: 10.1021/Np400196W |
0.384 |
|
| 2013 |
Skillman KM, Ma CI, Fremont DH, Diraviyam K, Cooper JA, Sept D, Sibley LD. The unusual dynamics of parasite actin result from isodesmic polymerization. Nature Communications. 4: 2285. PMID 23921463 DOI: 10.1038/Ncomms3285 |
0.437 |
|
| 2013 |
Hawkins TL, Sept D, Mogessie B, Straube A, Ross JL. Mechanical properties of doubly stabilized microtubule filaments. Biophysical Journal. 104: 1517-28. PMID 23561528 DOI: 10.1016/J.Bpj.2013.02.026 |
0.381 |
|
| 2013 |
Hawkins TL, Sept D, Mogessie B, Straube A, Ross JL. Doubly-Stabilized Microtubule Mechanics Biophysical Journal. 104: 144a. DOI: 10.1016/J.Bpj.2012.11.819 |
0.397 |
|
| 2013 |
Skillman KM, Ma C, Diraviyam K, Fremont DH, Cooper JA, Sibley LD, Sept D. Toxoplasma Gondii Actin Assembles via Isodesmic Polymerization Biophysical Journal. 104: 645a. DOI: 10.1016/J.Bpj.2012.11.3563 |
0.434 |
|
| 2013 |
Sim H, Sept D. Properties of microtubules with isotropic and anisotropic mechanics Cellular and Molecular Bioengineering. 6: 361-368. DOI: 10.1007/S12195-013-0302-Y |
0.324 |
|
| 2012 |
Brouhard G, Sept D. Microtubules: sizing up the GTP cap. Current Biology : Cb. 22: R802-3. PMID 23017994 DOI: 10.1016/J.Cub.2012.07.050 |
0.314 |
|
| 2012 |
Kim T, Ravilious GE, Sept D, Cooper JA. Mechanism for CARMIL protein inhibition of heterodimeric actin-capping protein. The Journal of Biological Chemistry. 287: 15251-62. PMID 22411988 DOI: 10.1074/Jbc.M112.345447 |
0.43 |
|
| 2012 |
Saxena A, Sept D. A Multisite Ion Model that Improves Free Energy Calculations in Molecular Dynamics Simulations Biophysical Journal. 102: 40a. DOI: 10.1016/J.Bpj.2011.11.248 |
0.317 |
|
| 2012 |
Hawkins TL, Mirigian M, Li J, Yasar MS, Sackett DL, Sept D, Ross JL. Perturbations in microtubule mechanics from tubulin preparation Cellular and Molecular Bioengineering. 5: 227-238. DOI: 10.1007/S12195-012-0229-8 |
0.359 |
|
| 2011 |
Skillman KM, Diraviyam K, Khan A, Tang K, Sept D, Sibley LD. Evolutionarily divergent, unstable filamentous actin is essential for gliding motility in apicomplexan parasites. Plos Pathogens. 7: e1002280. PMID 21998582 DOI: 10.1371/Journal.Ppat.1002280 |
0.432 |
|
| 2011 |
Wong DY, Sept D. The interaction of cofilin with the actin filament. Journal of Molecular Biology. 413: 97-105. PMID 21875597 DOI: 10.1016/J.Jmb.2011.08.039 |
0.474 |
|
| 2011 |
Paredez AR, Assaf ZJ, Sept D, Timofejeva L, Dawson SC, Wang CJ, Cande WZ. An actin cytoskeleton with evolutionarily conserved functions in the absence of canonical actin-binding proteins. Proceedings of the National Academy of Sciences of the United States of America. 108: 6151-6. PMID 21444821 DOI: 10.1073/Pnas.1018593108 |
0.437 |
|
| 2011 |
Wong DY, Sept D. Observations of Twist and Disorder in F-actin from Cofilin Binding Biophysical Journal. 100: 300a. DOI: 10.1016/J.Bpj.2010.12.1837 |
0.468 |
|
| 2010 |
Kim T, Cooper JA, Sept D. The interaction of capping protein with the barbed end of the actin filament. Journal of Molecular Biology. 404: 794-802. PMID 20969875 DOI: 10.1016/J.Jmb.2010.10.017 |
0.472 |
|
| 2010 |
De La Cruz EM, Sept D. The kinetics of cooperative cofilin binding reveals two states of the cofilin-actin filament. Biophysical Journal. 98: 1893-901. PMID 20441753 DOI: 10.1016/J.Bpj.2010.01.023 |
0.443 |
|
| 2010 |
Goley ED, Rammohan A, Znameroski EA, Firat-Karalar EN, Sept D, Welch MD. An actin-filament-binding interface on the Arp2/3 complex is critical for nucleation and branch stability. Proceedings of the National Academy of Sciences of the United States of America. 107: 8159-64. PMID 20404198 DOI: 10.1073/Pnas.0911668107 |
0.456 |
|
| 2010 |
Sept D, MacKintosh FC. Microtubule elasticity: connecting all-atom simulations with continuum mechanics. Physical Review Letters. 104: 018101. PMID 20366396 DOI: 10.1103/Physrevlett.104.018101 |
0.365 |
|
| 2010 |
Lin MC, Galletta BJ, Sept D, Cooper JA. Overlapping and distinct functions for cofilin, coronin and Aip1 in actin dynamics in vivo. Journal of Cell Science. 123: 1329-42. PMID 20332110 DOI: 10.1242/Jcs.065698 |
0.439 |
|
| 2010 |
Ma C, Tran J, Gu F, Ochoa R, Li C, Sept D, Werbovetz K, Morrissette N. Dinitroaniline activity in Toxoplasma gondii expressing wild-type or mutant alpha-tubulin. Antimicrobial Agents and Chemotherapy. 54: 1453-60. PMID 20145086 DOI: 10.1128/Aac.01150-09 |
0.34 |
|
| 2010 |
Oztug Durer ZA, Diraviyam K, Sept D, Kudryashov DS, Reisler E. F-actin structure destabilization and DNase I binding loop: fluctuations mutational cross-linking and electron microscopy analysis of loop states and effects on F-actin. Journal of Molecular Biology. 395: 544-57. PMID 19900461 DOI: 10.1016/J.Jmb.2009.11.001 |
0.385 |
|
| 2010 |
Wong DY, Sept D. Molecular Interaction of Cofilin with F-Actin and Implications for Filament Severing Biophysical Journal. 98: 155a. DOI: 10.1016/J.Bpj.2009.12.833 |
0.458 |
|
| 2010 |
Cruz EMDL, Sept D. The Kinetics of Cooperative Cofilin Binding to Actin Filaments Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.832 |
0.409 |
|
| 2010 |
Saxena A, Sept D. Prediction of Calcium Binding Site in the RCK1 Domain of BKCa Channel Using Multisite Cation Model Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.2116 |
0.352 |
|
| 2010 |
Diraviyam K, Skillman K, Sibley D, Sept D. Molecular Basis for the Instability of Parasitic Actin Filaments Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.110 |
0.448 |
|
| 2009 |
Silva JR, Pan H, Wu D, Nekouzadeh A, Decker KF, Cui J, Baker NA, Sept D, Rudy Y. A multiscale model linking ion-channel molecular dynamics and electrostatics to the cardiac action potential. Proceedings of the National Academy of Sciences of the United States of America. 106: 11102-6. PMID 19549851 DOI: 10.1073/Pnas.0904505106 |
0.327 |
|
| 2009 |
Bean GJ, Flickinger ST, Westler WM, McCully ME, Sept D, Weibel DB, Amann KJ. A22 disrupts the bacterial actin cytoskeleton by directly binding and inducing a low-affinity state in MreB. Biochemistry. 48: 4852-7. PMID 19382805 DOI: 10.1021/Bi900014D |
0.324 |
|
| 2009 |
Moore JK, Sept D, Cooper JA. Neurodegeneration mutations in dynactin impair dynein-dependent nuclear migration. Proceedings of the National Academy of Sciences of the United States of America. 106: 5147-52. PMID 19279216 DOI: 10.1073/Pnas.0810828106 |
0.325 |
|
| 2009 |
Diraviyam K, Sept D. Computational modeling of the binding interaction of Jasplakinolide and Phalloidin with mammalian and parasite F-actin Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.568 |
0.423 |
|
| 2009 |
Wong DY, Sept D. Structural Binding Model of Cofilin and F-actin Biophysical Journal. 96: 124a-125a. DOI: 10.1016/J.Bpj.2008.12.555 |
0.457 |
|
| 2009 |
Sackett DL, Sept D. Structure and Evolution of Tubulin C-terminal Tails Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.3746 |
0.325 |
|
| 2009 |
Saxena A, Cui J, Sept D. Calcium Binding Causes A Conformational Change in The RCK1 Domain of The BK(Ca) Channel Biophysical Journal. 96: 473a. DOI: 10.1016/J.Bpj.2008.12.2450 |
0.349 |
|
| 2008 |
Mitra A, Sept D. Taxol allosterically alters the dynamics of the tubulin dimer and increases the flexibility of microtubules. Biophysical Journal. 95: 3252-8. PMID 18621813 DOI: 10.1529/Biophysj.108.133884 |
0.629 |
|
| 2008 |
Cooper JA, Sept D. New insights into mechanism and regulation of actin capping protein. International Review of Cell and Molecular Biology. 267: 183-206. PMID 18544499 DOI: 10.1016/S1937-6448(08)00604-7 |
0.443 |
|
| 2008 |
Frederick KB, Sept D, De La Cruz EM. Effects of solution crowding on actin polymerization reveal the energetic basis for nucleotide-dependent filament stability. Journal of Molecular Biology. 378: 540-50. PMID 18374941 DOI: 10.1016/J.Jmb.2008.02.022 |
0.416 |
|
| 2008 |
Grintsevich EE, Benchaar SA, Warshaviak D, Boontheung P, Halgand F, Whitelegge JP, Faull KF, Loo RR, Sept D, Loo JA, Reisler E. Mapping the cofilin binding site on yeast G-actin by chemical cross-linking. Journal of Molecular Biology. 377: 395-409. PMID 18258262 DOI: 10.1016/J.Jmb.2007.12.073 |
0.441 |
|
| 2007 |
Yang L, Sept D, Carlsson AE. First-contact time to a patch in a multidimensional potential well. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 021911. PMID 17930069 DOI: 10.1103/Physreve.76.021911 |
0.403 |
|
| 2007 |
Ma C, Li C, Ganesan L, Oak J, Tsai S, Sept D, Morrissette NS. Mutations in alpha-tubulin confer dinitroaniline resistance at a cost to microtubule function. Molecular Biology of the Cell. 18: 4711-20. PMID 17881728 DOI: 10.1091/Mbc.E07-04-0379 |
0.308 |
|
| 2007 |
Sept D. Microtubule polymerization: one step at a time. Current Biology : Cb. 17: R764-6. PMID 17803927 DOI: 10.1016/J.Cub.2007.07.002 |
0.373 |
|
| 2007 |
Zheng X, Diraviyam K, Sept D. Nucleotide effects on the structure and dynamics of actin. Biophysical Journal. 93: 1277-83. PMID 17526584 DOI: 10.1529/Biophysj.107.109215 |
0.425 |
|
| 2007 |
Kim K, McCully ME, Bhattacharya N, Butler B, Sept D, Cooper JA. Structure/function analysis of the interaction of phosphatidylinositol 4,5-bisphosphate with actin-capping protein: implications for how capping protein binds the actin filament. The Journal of Biological Chemistry. 282: 5871-9. PMID 17182619 DOI: 10.1074/Jbc.M609850200 |
0.457 |
|
| 2006 |
Hokanson DE, Laakso JM, Lin T, Sept D, Ostap EM. Myo1c binds phosphoinositides through a putative pleckstrin homology domain. Molecular Biology of the Cell. 17: 4856-65. PMID 16971510 DOI: 10.1091/Mbc.E06-05-0449 |
0.346 |
|
| 2006 |
Mitra A, Sept D. Binding and interaction of dinitroanilines with apicomplexan and kinetoplastid alpha-tubulin. Journal of Medicinal Chemistry. 49: 5226-31. PMID 16913711 DOI: 10.1021/Jm060472+ |
0.615 |
|
| 2006 |
Bhattacharya N, Ghosh S, Sept D, Cooper JA. Binding of myotrophin/V-1 to actin-capping protein: implications for how capping protein binds to the filament barbed end. The Journal of Biological Chemistry. 281: 31021-30. PMID 16895918 DOI: 10.1074/Jbc.M606278200 |
0.433 |
|
| 2006 |
Yang L, Sept D, Carlsson AE. Energetics and dynamics of constrained actin filament bundling. Biophysical Journal. 90: 4295-304. PMID 16565053 DOI: 10.1529/Biophysj.105.076968 |
0.544 |
|
| 2006 |
Clark MG, Teply J, Haarer BK, Viggiano SC, Sept D, Amberg DC. A genetic dissection of Aip1p's interactions leads to a model for Aip1p-cofilin cooperative activities. Molecular Biology of the Cell. 17: 1971-84. PMID 16421248 DOI: 10.1091/Mbc.E05-10-0956 |
0.442 |
|
| 2006 |
Sahoo N, Beatty W, Heuser J, Sept D, Sibley LD. Unusual kinetic and structural properties control rapid assembly and turnover of actin in the parasite Toxoplasma gondii. Molecular Biology of the Cell. 17: 895-906. PMID 16319175 DOI: 10.1091/Mbc.E05-06-0512 |
0.414 |
|
| 2004 |
Mitra A, Sept D. Localization of the antimitotic peptide and depsipeptide binding site on beta-tubulin. Biochemistry. 43: 13955-62. PMID 15518544 DOI: 10.1021/Bi0487387 |
0.601 |
|
| 2004 |
Morrissette NS, Mitra A, Sept D, Sibley LD. Dinitroanilines bind alpha-tubulin to disrupt microtubules. Molecular Biology of the Cell. 15: 1960-8. PMID 14742718 DOI: 10.1091/Mbc.E03-07-0530 |
0.56 |
|
| 2003 |
Sept D, Baker NA, McCammon JA. The physical basis of microtubule structure and stability. Protein Science : a Publication of the Protein Society. 12: 2257-61. PMID 14500883 DOI: 10.1110/Ps.03187503 |
0.37 |
|
| 2003 |
Tuszynski JA, Brown JA, Sept D. Models of the Collective Behavior of Proteins in Cells: Tubulin, Actin and Motor Proteins Journal of Biological Physics. 29: 401-428. DOI: 10.1023/A:1027318920964 |
0.455 |
|
| 2001 |
Andrianantoandro E, Blanchoin L, Sept D, McCammon JA, Pollard TD. Kinetic mechanism of end-to-end annealing of actin filaments. Journal of Molecular Biology. 312: 721-30. PMID 11575927 DOI: 10.1006/Jmbi.2001.5005 |
0.394 |
|
| 2001 |
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA. Electrostatics of nanosystems: Application to microtubules and the ribosome Proceedings of the National Academy of Sciences of the United States of America. 98: 10037-10041. PMID 11517324 DOI: 10.1073/Pnas.181342398 |
0.302 |
|
| 2001 |
Sept D, McCammon JA. Thermodynamics and kinetics of actin filament nucleation Biophysical Journal. 81: 667-674. PMID 11463615 DOI: 10.1016/S0006-3495(01)75731-1 |
0.37 |
|
| 1999 |
Sept D, Elcock AH, McCammon JA. Computer simulations of actin polymerization can explain the barbed-pointed end asymmetry Journal of Molecular Biology. 294: 1181-1189. PMID 10600376 DOI: 10.1006/Jmbi.1999.3332 |
0.429 |
|
| 1999 |
Sept D, Xu J, Pollard TD, McCammon JA. Annealing accounts for the length of actin filaments formed by spontaneous polymerization Biophysical Journal. 77: 2911-2919. PMID 10585915 DOI: 10.1016/S0006-3495(99)77124-9 |
0.404 |
|
| 1999 |
Sept D, Limbach HJ, Bolterauer H, Tuszynski JA. A chemical kinetics model for microtubule oscillations Journal of Theoretical Biology. 197: 77-88. DOI: 10.1006/Jtbi.1998.0861 |
0.31 |
|
| 1997 |
Tuszyński JA, Trpišová B, Sept D, Satarić MV. The enigma of microtubules and their self-organizing behavior in the cytoskeleton Biosystems. 42: 153-175. PMID 9184762 DOI: 10.1016/S0303-2647(97)01704-8 |
0.352 |
|
| 1997 |
Tuszynski JA, Trpišová B, Sept D, Brown JA. Selected physical issues in the structure and function of microtubules Journal of Structural Biology. 118: 94-106. PMID 9126636 DOI: 10.1006/Jsbi.1997.3843 |
0.356 |
|
| 1996 |
Tuszyński JA, Sept D, Trpisová B. The cell's microtubules: Growth dynamics, ordering of dipoles and modes of energy propagation Mathematics and Computers in Simulation. 40: 425-442. DOI: 10.1016/0378-4754(95)00047-X |
0.377 |
|
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