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Samuel A. Isaacson, Ph.D. - Publications

Affiliations: 
2005 New York University, New York, NY, United States 
Area:
Mathematics, General Biology
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ma J, Do M, Gros MAL, Peskin CS, Larabell CA, Mori Y, Isaacson SA. Strong Intracellular Signal Inactivation Produces Sharper and More Robust Signaling from Cell Membrane to Nucleus. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 29: 1167. PMID 37613341 DOI: 10.1093/micmic/ozad067.598  0.56
2020 Ma J, Do M, Le Gros MA, Peskin CS, Larabell CA, Mori Y, Isaacson SA. Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus. Plos Computational Biology. 16: e1008356. PMID 33196636 DOI: 10.1371/journal.pcbi.1008356  0.611
2019 Zhang Y, Clemens L, Goyette J, Allard J, Dushek O, Isaacson SA. The Influence of Molecular Reach and Diffusivity on the Efficacy of Membrane-Confined Reactions. Biophysical Journal. PMID 31543263 DOI: 10.1016/J.Bpj.2019.08.023  0.436
2019 Wang J, Isaacson SA, Belta C. Modeling Genetic Circuit Behavior in Transiently Transfected Mammalian Cells. Acs Synthetic Biology. PMID 30884948 DOI: 10.1021/Acssynbio.8B00166  0.33
2018 Isaacson SA, Zhang Y. An unstructured mesh convergent reaction-diffusion master equation for reversible reactions Journal of Computational Physics. 374: 954-983. DOI: 10.1016/J.Jcp.2018.07.036  0.406
2017 Goyette J, Salas CS, Coker-Gordon N, Bridge M, Isaacson SA, Allard J, Dushek O. Biophysical assay for tethered signaling reactions reveals tether-controlled activity for the phosphatase SHP-1. Science Advances. 3: e1601692. PMID 28378014 DOI: 10.1126/Sciadv.1601692  0.357
2016 Isaacson SA, Mauro AJ, Newby J. Uniform asymptotic approximation of diffusion to a small target: Generalized reaction models. Physical Review. E. 94: 042414. PMID 27841549 DOI: 10.1103/Physreve.94.042414  0.449
2016 Jonathan Chapman S, Erban R, Isaacson SA. Reactive boundary conditions as limits of interaction potentials for brownian and langevin dynamics Siam Journal On Applied Mathematics. 76: 368-390. DOI: 10.1137/15M1030662  0.324
2014 Agbanusi IC, Isaacson SA. A Comparison of Bimolecular Reaction Models for Stochastic Reaction-Diffusion Systems Bulletin of Mathematical Biology. 76: 922-946. PMID 23579988 DOI: 10.1007/S11538-013-9833-6  0.452
2014 Mauro AJ, Sigurdsson JK, Shrake J, Atzberger PJ, Isaacson SA. A First-Passage Kinetic Monte Carlo method for reaction-drift-diffusion processes Journal of Computational Physics. 259: 536-567. DOI: 10.1016/J.Jcp.2013.12.023  0.447
2013 Isaacson SA, Larabell CA, Le Gros MA, McQueen DM, Peskin CS. The influence of spatial variation in chromatin density determined by X-ray tomograms on the time to find DNA binding sites. Bulletin of Mathematical Biology. 75: 2093-117. PMID 23955281 DOI: 10.1007/S11538-013-9883-9  0.525
2013 Isaacson SA, Newby J. Uniform asymptotic approximation of diffusion to a small target. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 88: 012820. PMID 23944531 DOI: 10.1103/Physreve.88.012820  0.382
2013 Isaacson SA. A convergent reaction-diffusion master equation. The Journal of Chemical Physics. 139: 054101. PMID 23927237 DOI: 10.1063/1.4816377  0.435
2011 Isaacson SA, McQueen DM, Peskin CS. The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion. Proceedings of the National Academy of Sciences of the United States of America. 108: 3815-20. PMID 21300894 DOI: 10.1073/Pnas.1018821108  0.547
2009 Isaacson SA, Isaacson D. Reaction-diffusion master equation, diffusion-limited reactions, and singular potentials. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 066106. PMID 20365230 DOI: 10.1103/Physreve.80.066106  0.44
2009 Isaacson SA. The reaction-diffusion master equation as an asymptotic approximation of diffusion to a small target Siam Journal On Applied Mathematics. 70: 77-111. DOI: 10.1137/070705039  0.448
2009 Atzberger PJ, Isaacson S, Peskin CS. A microfluidic pumping mechanism driven by non-equilibrium osmotic effects Physica D: Nonlinear Phenomena. 238: 1168-1179. DOI: 10.1016/J.Physd.2009.03.018  0.531
2008 Isaacson SA. Relationship between the reaction-diffusion master equation and particle tracking models Journal of Physics a: Mathematical and Theoretical. 41. DOI: 10.1088/1751-8113/41/6/065003  0.414
2006 Isaacson SA, Peskin CS. Incorporating diffusion in complex geometries into stochastic chemical kinetics simulations Siam Journal On Scientific Computing. 28: 47-74. DOI: 10.1137/040605060  0.585
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