James A. Cole, Ph.D. - Publications

Affiliations: 
2002 Vanderbilt University, Nashville, TN 
Area:
Mathematics

247 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Cole JA. Reinforcement and a cline in mating behavior evolve in response to secondary contact and hybridization in shield-back katydids (Orthoptera: Tettigoniidae). Journal of Evolutionary Biology. PMID 27226144 DOI: 10.1111/jeb.12900  1
2016 Walton C, Montoya MP, Fowler DP, Turner C, Jia W, Whitehead RN, Griffiths L, Waring RH, Ramsden DB, Cole JA, Cauchi M, Bessant C, Naylor SJ, Hunter JO. Enteral feeding reduces metabolic activity of the intestinal microbiome in Crohn's disease: an observational study. European Journal of Clinical Nutrition. PMID 27167669 DOI: 10.1038/ejcn.2016.74  1
2016 Wang J, Vine CE, Balasiny BK, Rizk J, Bradley CL, Trejo MT, Poole RK, Bergaust LL, Bakken LR, Cole JA. The roles of the hybrid cluster protein, Hcp, and its reductase, Hcr, in high affinity nitric oxide reduction that protects anaerobic cultures of Escherichia coli against nitrosative stress. Molecular Microbiology. PMID 26879449 DOI: 10.1111/mmi.13356  1
2015 Palomo M, Cole JA. Expanding institutional bonds for teaming up students for the creation of research environmental projects Asee Annual Conference and Exposition, Conference Proceedings. 122.  1
2014 Cole JA. Synthetic biology: old wine in new bottles with an emerging language that ranges from the sublime to the ridiculous? Fems Microbiology Letters. 351: 113-5. PMID 24588708 DOI: 10.1111/1574-6968.12388  1
2014 Cole JA, Cadogan G. Bankruptcy risk induced by career concerns of regulators Finance Research Letters. 11: 259-271. DOI: 10.1016/j.frl.2014.02.001  1
2014 Cauchi M, Fowler DP, Walton C, Turner C, Jia W, Whitehead RN, Griffiths L, Dawson C, Bai H, Waring RH, Ramsden DB, Hunter JO, Cole JA, Bessant C. Application of gas chromatography mass spectrometry (GC-MS) in conjunction with multivariate classification for the diagnosis of gastrointestinal diseases Metabolomics. DOI: 10.1007/s11306-014-0650-1  1
2014 Cole JA, Luthey-Schulten Z. Whole cell modeling: From single cells to colonies Israel Journal of Chemistry. DOI: 10.1002/ijch.201300147  1
2014 Cole JA, Trunov A, Lieberman RA. Optical hydrogen sensor for inert environments Topical Conference On Hydrogen 2006, Held At the 2006 Aiche Spring National Meeting. 13-21.  1
2013 Walton C, Fowler DP, Turner C, Jia W, Whitehead RN, Griffiths L, Dawson C, Waring RH, Ramsden DB, Cole JA, Cauchi M, Bessant C, Hunter JO. Analysis of volatile organic compounds of bacterial origin in chronic gastrointestinal diseases. Inflammatory Bowel Diseases. 19: 2069-78. PMID 23867873 DOI: 10.1097/MIB.0b013e31829a91f6  1
2013 Hopper AC, Li Y, Cole JA. A critical role for the cccA gene product, cytochrome c2, in diverting electrons from aerobic respiration to denitrification in Neisseria gonorrhoeae. Journal of Bacteriology. 195: 2518-29. PMID 23543713 DOI: 10.1128/JB.02300-12  1
2013 Fossati T, Cole JA, Longo V, Porro D, Branduardi P. Microbial stress: from molecules to systems (Belgirate, May 2012). New Biotechnology. 30: 105-8. PMID 22824545 DOI: 10.1016/j.nbt.2012.07.004  1
2013 Cole J, Ferrer P, Mattanovich D, Archer D. Recombinant protein production 6: a comparative view on host physiology. New Biotechnology. 30: 246. PMID 22019830 DOI: 10.1016/j.nbt.2011.10.002  1
2013 Cole JA, Maughmer MD, Bramesfeld G. Aerodynamic design considerations for tiltrotor wing extensions and winglets 51st Aiaa Aerospace Sciences Meeting Including the New Horizons Forum and Aerospace Exposition 2013 1
2012 Sevastsyanovich YR, Leyton DL, Wells TJ, Wardius CA, Tveen-Jensen K, Morris FC, Knowles TJ, Cunningham AF, Cole JA, Henderson IR. A generalised module for the selective extracellular accumulation of recombinant proteins. Microbial Cell Factories. 11: 69. PMID 22640772 DOI: 10.1186/1475-2859-11-69  1
2012 Cole JA. Legless pathogens: how bacterial physiology provides the key to understanding pathogenicity. Microbiology (Reading, England). 158: 1402-13. PMID 22493300 DOI: 10.1099/mic.0.059048-0  1
2012 Jia W, Whitehead RN, Griffiths L, Dawson C, Bai H, Waring RH, Ramsden DB, Hunter JO, Cauchi M, Bessant C, Fowler DP, Walton C, Turner C, Cole JA. Diversity and distribution of sulphate-reducing bacteria in human faeces from healthy subjects and patients with inflammatory bowel disease. Fems Immunology and Medical Microbiology. 65: 55-68. PMID 22309113 DOI: 10.1111/j.1574-695X.2012.00935.x  1
2012 Cole JA. Recruiting the best and the brightest: A call to action Geomatica. 66: 221. DOI: 10.5623/cig2012-043  1
2012 Cole JA, Chatfield-Taylor W. Orchelimum superbum (Orthoptera: Tettigoniidae: Conocephalinae) on the great plains of North America Journal of Orthoptera Research. 21: 45-50. DOI: 10.1665/034.021.0103  1
2011 Vine CE, Purewal SK, Cole JA. NsrR-dependent method for detecting nitric oxide accumulation in the Escherichia coli cytoplasm and enzymes involved in NO production. Fems Microbiology Letters. 325: 108-14. PMID 22092912 DOI: 10.1111/j.1574-6968.2011.02385.x  1
2011 Vine CE, Cole JA. Unresolved sources, sinks, and pathways for the recovery of enteric bacteria from nitrosative stress. Fems Microbiology Letters. 325: 99-107. PMID 22029434 DOI: 10.1111/j.1574-6968.2011.02425.x  1
2011 Alfasi S, Sevastsyanovich Y, Zaffaroni L, Griffiths L, Hall R, Cole J. Use of GFP fusions for the isolation of Escherichia coli strains for improved production of different target recombinant proteins. Journal of Biotechnology. 156: 11-21. PMID 21875628 DOI: 10.1016/j.jbiotec.2011.08.016  1
2011 Klatte T, Evans L, Whitehead RN, Cole JA. Four PCR primers necessary for the detection of periplasmic nitrate reductase genes in all groups of Proteobacteria and in environmental DNA. Biochemical Society Transactions. 39: 321-6. PMID 21265796 DOI: 10.1042/BST0390321  1
2011 Cadby IT, Busby SJ, Cole JA. An HcpR homologue from Desulfovibrio desulfuricans and its possible role in nitrate reduction and nitrosative stress. Biochemical Society Transactions. 39: 224-9. PMID 21265778 DOI: 10.1042/BST0390224  1
2011 Vine CE, Cole JA. Nitrosative stress in Escherichia coli: reduction of nitric oxide. Biochemical Society Transactions. 39: 213-5. PMID 21265775 DOI: 10.1042/BST0390213  1
2011 Martínez-Espinosa RM, Cole JA, Richardson DJ, Watmough NJ. Enzymology and ecology of the nitrogen cycle. Biochemical Society Transactions. 39: 175-8. PMID 21265768 DOI: 10.1042/BST0390175  1
2011 Cole JA, Meyers SA. Osmotic stress stimulates phosphorylation and cellular expression of heat shock proteins in rhesus macaque sperm Journal of Andrology. 32: 402-410. PMID 21088232 DOI: 10.2164/Jandrol.110.010702  1
2011 Cole JA. Geomatics and the law Geomatica. 65: 404-405. DOI: 10.5623/cig2011-063  1
2011 Cole JA. Response of neisseria gonorrhoeae to oxygen limitation and excess Advances in Molecular and Cellular Microbiology: Stress Response in Pathogenic Bacteria. 221-242.  1
2010 Wise MJ, Abrahamson WG, Cole JA. The role of nodding stems in the goldenrod-gall-fly interaction: A test of the "ducking" hypothesis. American Journal of Botany. 97: 525-9. PMID 21622414 DOI: 10.3732/Ajb.0900227  1
2010 Jia W, Whitehead RN, Griffiths L, Dawson C, Waring RH, Ramsden DB, Hunter JO, Cole JA. Is the abundance of Faecalibacterium prausnitzii relevant to Crohn's disease? Fems Microbiology Letters. 310: 138-44. PMID 20695899 DOI: 10.1111/j.1574-6968.2010.02057.x  1
2010 Li Y, Hopper A, Overton T, Squire DJ, Cole J, Tovell N. Organization of the electron transfer chain to oxygen in the obligate human pathogen Neisseria gonorrhoeae: roles for cytochromes c4 and c5, but not cytochrome c2, in oxygen reduction. Journal of Bacteriology. 192: 2395-406. PMID 20154126 DOI: 10.1128/JB.00002-10  1
2010 Vine CE, Justino MC, Saraiva LM, Cole J. Detection by whole genome microarrays of a spontaneous 126-gene deletion during construction of a ytfE mutant: confirmation that a ytfE mutation results in loss of repair of iron-sulfur centres in proteins damaged by oxidative or nitrosative stress. Journal of Microbiological Methods. 81: 77-9. PMID 20138195 DOI: 10.1016/j.mimet.2010.01.023  1
2010 Sevastsyanovich YR, Alfasi SN, Cole JA. Sense and nonsense from a systems biology approach to microbial recombinant protein production. Biotechnology and Applied Biochemistry. 55: 9-28. PMID 20044926 DOI: 10.1042/BA20090174  1
2010 Cole JA, Maughmer MD, Schmidt KJ. The flight vehicle design and fabrication course: Two decades of project-based learning at Penn State 10th Aiaa Aviation Technology, Integration and Operations Conference 2010, Atio 2010. 2. DOI: 10.2514/6.2010-9153  1
2010 Wise MJ, Cole JA, Carr DE. A field study of potential ecological costs of resistance by 'stem ducking' in tall goldenrod, Solidago altissima Entomologia Experimentalis Et Applicata. 136: 271-280. DOI: 10.1111/J.1570-7458.2010.01022.X  1
2010 Cole JA. Clinal variation explains taxonomic discrepancy in the calling songs of shield-back katydids (Orthoptera: Tettigoniidae: Tettigoniinae: Aglaothorax) Biological Journal of the Linnean Society. 101: 910-921. DOI: 10.1111/j.1095-8312.2010.01532.x  1
2009 Blaudow RA, Coons LB, Cole JA. Cyclic nucleotide crosstalk in salivary glands from partially fed Dermacentor variabilis (Say) Journal of Insect Physiology. 55: 805-812. PMID 19520084 DOI: 10.1016/J.Jinsphys.2009.05.016  1
2009 de Marco A, Sevastsyanovich YR, Cole JA. Minimal information for protein functional evaluation (MIPFE) workshop. New Biotechnology. 25: 170. PMID 19429531 DOI: 10.1016/j.nbt.2008.12.006  1
2009 Squire DJ, Xu M, Cole JA, Busby SJ, Browning DF. Competition between NarL-dependent activation and Fis-dependent repression controls expression from the Escherichia coli yeaR and ogt promoters. The Biochemical Journal. 420: 249-57. PMID 19245365 DOI: 10.1042/BJ20090183  1
2009 Snyder LA, Cole JA, Pallen MJ. Comparative analysis of two Neisseria gonorrhoeae genome sequences reveals evidence of mobilization of Correia Repeat Enclosed Elements and their role in regulation. Bmc Genomics. 10: 70. PMID 19203353 DOI: 10.1186/1471-2164-10-70  1
2009 Jia W, Tovell N, Clegg S, Trimmer M, Cole J. A single channel for nitrate uptake, nitrite export and nitrite uptake by Escherichia coli NarU and a role for NirC in nitrite export and uptake. The Biochemical Journal. 417: 297-304. PMID 18691156 DOI: 10.1042/BJ20080746  1
2009 Cole JA, Kihara T. The ∀∃-theory of the effectively closed Medvedev degrees is decidable Archive For Mathematical Logic. 49: 1-16. DOI: 10.1007/S00153-009-0150-6  1
2009 Cole JA. The evolution of the fishing vessels of the Pacific Northwest of the United States and Alaska Rina, Royal Institution of Naval Architects - International Conference On Historic Ships 2009 - Papers. 41-52.  1
2008 Cole JA, Richardson DJ. Respiration of Nitrate and Nitrite. Ecosal Plus. 3. PMID 26443731 DOI: 10.1128/ecosal.3.2.5  1
2008 Cole JA, Platten DJ. A comparison of shielding calculation methods for multi-slice computed tomography (CT) systems Journal of Radiological Protection. 28: 511-523. PMID 19029585 DOI: 10.1088/0952-4746/28/4/005  1
2008 Cole JA, Novosel TA, Williams JV. Pocklike scarring and sublingual papules in a child Archives of Dermatology. 144. PMID 18936408 DOI: 10.1001/archderm.144.10.1383-a  1
2008 Browning DF, Cole JA, Busby SJ. Regulation by nucleoid-associated proteins at the Escherichia coli nir operon promoter. Journal of Bacteriology. 190: 7258-67. PMID 18757534 DOI: 10.1128/JB.01015-08  1
2008 Clarke TA, Mills PC, Poock SR, Butt JN, Cheesman MR, Cole JA, Hinton JC, Hemmings AM, Kemp G, Söderberg CA, Spiro S, Van Wonderen J, Richardson DJ. Escherichia coli cytochrome c nitrite reductase NrfA. Methods in Enzymology. 437: 63-77. PMID 18433623 DOI: 10.1016/S0076-6879(07)37004-3  1
2008 Hunt DM, Saldanha JW, Brennan JF, Benjamin P, Strom M, Cole JA, Spreadbury CL, Buxton RS. Single nucleotide polymorphisms that cause structural changes in the cyclic AMP receptor protein transcriptional regulator of the tuberculosis vaccine strain Mycobacterium bovis BCG alter global gene expression without attenuating growth. Infection and Immunity. 76: 2227-34. PMID 18332206 DOI: 10.1128/IAI.01410-07  1
2008 Clarke TA, Kemp GL, Van Wonderen JH, Doyle RM, Cole JA, Tovell N, Cheesman MR, Butt JN, Richardson DJ, Hemmings AM. Role of a conserved glutamine residue in tuning the catalytic activity of Escherichia coli cytochrome c nitrite reductase. Biochemistry. 47: 3789-99. PMID 18311941 DOI: 10.1021/bi702175w  1
2008 Overton TW, Justino MC, Li Y, Baptista JM, Melo AM, Cole JA, Saraiva LM. Widespread distribution in pathogenic bacteria of di-iron proteins that repair oxidative and nitrosative damage to iron-sulfur centers. Journal of Bacteriology. 190: 2004-13. PMID 18203837 DOI: 10.1128/JB.01733-07  1
2008 Cole JA. A new cryptic species of cicada resembling Tibicen dorsatus revealed by calling song (Hemiptera: Auchenorrhyncha: Cicadidae) Annals of the Entomological Society of America. 101: 815-823. DOI: 10.1603/0013-8746(2008)101[815:ANCSOC]2.0.CO;2  1
2008 Cole JA. Embedding FD(ω) into Ps densely Archive For Mathematical Logic. 46: 649-664. DOI: 10.1007/S00153-007-0062-2  1
2007 Clarke TA, Cole JA, Richardson DJ, Hemmings AM. The crystal structure of the pentahaem c-type cytochrome NrfB and characterization of its solution-state interaction with the pentahaem nitrite reductase NrfA. The Biochemical Journal. 406: 19-30. PMID 17521287 DOI: 10.1042/BJ20070321  1
2007 Filenko N, Spiro S, Browning DF, Squire D, Overton TW, Cole J, Constantinidou C. The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic, respiratory nitrite reductase. Journal of Bacteriology. 189: 4410-7. PMID 17449618 DOI: 10.1128/Jb.00080-07  1
2007 Whitehead RN, Overton TW, Snyder LA, McGowan SJ, Smith H, Cole JA, Saunders NJ. The small FNR regulon of Neisseria gonorrhoeae: comparison with the larger Escherichia coli FNR regulon and interaction with the NarQ-NarP regulon. Bmc Genomics. 8: 35. PMID 17261178 DOI: 10.1186/1471-2164-8-35  1
2007 Jepson BJ, Mohan S, Clarke TA, Gates AJ, Cole JA, Butler CS, Butt JN, Hemmings AM, Richardson DJ. Spectropotentiometric and structural analysis of the periplasmic nitrate reductase from Escherichia coli. The Journal of Biological Chemistry. 282: 6425-37. PMID 17130127 DOI: 10.1074/jbc.M607353200  1
2007 Cole JA, Simopson SG. Mass problems and hyperarithmeticity Journal of Mathematical Logic. 7: 125-143. DOI: 10.1142/S0219061307000652  1
2007 Mohan SB, Cole JA. The Dissimilatory Reduction of Nitrate to Ammonia by Anaerobic Bacteria Biology of the Nitrogen Cycle. 93-106. DOI: 10.1016/B978-044452857-5.50008-4  1
2007 De Cicco S, Cole JA. Commercial experience with EMx™ - Ten years after Aiche Annual Meeting, Conference Proceedings 1
2007 Cole JA, De Cicco S. Multipollutant emissions control with EMx™ lean NOx trap catalyst technology Aiche Annual Meeting, Conference Proceedings 1
2006 Nilavongse A, Brondijk TH, Overton TW, Richardson DJ, Leach ER, Cole JA. The NapF protein of the Escherichia coli periplasmic nitrate reductase system: demonstration of a cytoplasmic location and interaction with the catalytic subunit, NapA. Microbiology (Reading, England). 152: 3227-37. PMID 17074894 DOI: 10.1099/mic.0.29157-0  1
2006 Desvaux M, Cooper LM, Filenko NA, Scott-Tucker A, Turner SM, Cole JA, Henderson IR. The unusual extended signal peptide region of the type V secretion system is phylogenetically restricted. Fems Microbiology Letters. 264: 22-30. PMID 17020545 DOI: 10.1111/j.1574-6968.2006.00425.x  1
2006 Overton TW, Whitehead R, Li Y, Snyder LA, Saunders NJ, Smith H, Cole JA. Coordinated regulation of the Neisseria gonorrhoeae-truncated denitrification pathway by the nitric oxide-sensitive repressor, NsrR, and nitrite-insensitive NarQ-NarP. The Journal of Biological Chemistry. 281: 33115-26. PMID 16954205 DOI: 10.1074/jbc.M607056200  1
2006 Browning DF, Lee DJ, Wolfe AJ, Cole JA, Busby SJ. The Escherichia coli K-12 NarL and NarP proteins insulate the nrf promoter from the effects of integration host factor. Journal of Bacteriology. 188: 7449-56. PMID 16936015 DOI: 10.1128/Jb.00975-06  1
2006 Cole JA, Norman H, Weatherby LB, Walker AM. Drug copayment and adherence in chronic heart failure: Effect on cost and outcomes Pharmacotherapy. 26: 1157-1164. PMID 16863491 DOI: 10.1592/phco.26.8.1157  1
2006 Clegg SJ, Jia W, Cole JA. Role of the Escherichia coli nitrate transport protein, NarU, in survival during severe nutrient starvation and slow growth. Microbiology (Reading, England). 152: 2091-100. PMID 16804183 DOI: 10.1099/mic.0.28688-0  1
2006 Clarke TA, Hemmings AM, Burlat B, Butt JN, Cole JA, Richardson DJ. Comparison of the structural and kinetic properties of the cytochrome c nitrite reductases from Escherichia coli, Wolinella succinogenes, Sulfurospirillum deleyianum and Desulfovibrio desulfuricans Biochemical Society Transactions. 34: 143-145. PMID 16417505 DOI: 10.1042/BST0340143  1
2006 Jepson BJ, Marietou A, Mohan S, Cole JA, Butler CS, Richardson DJ. Evolution of the soluble nitrate reductase: defining the monomeric periplasmic nitrate reductase subgroup. Biochemical Society Transactions. 34: 122-6. PMID 16417499 DOI: 10.1042/BST0340122  1
2006 Whitehead RN, Cole JA. Different responses to nitrate and nitrite by the model organism Escherichia coli and the human pathogen Neisseria gonorrhoeae Biochemical Society Transactions. 34: 111-114. PMID 16417496 DOI: 10.1042/BST0340111  1
2006 Overton TW, Griffiths L, Patel MD, Hobman JL, Penn CW, Cole JA, Constantinidou C. Microarray analysis of gene regulation by oxygen, nitrate, nitrite, FNR, NarL and NarP during anaerobic growth of Escherichia coli: New insights into microbial physiology Biochemical Society Transactions. 34: 104-107. PMID 16417494 DOI: 10.1042/BST0340104  1
2006 Constantinidou C, Hobman JL, Griffiths L, Patel MD, Penn CW, Cole JA, Overton TW. A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. The Journal of Biological Chemistry. 281: 4802-15. PMID 16377617 DOI: 10.1074/jbc.M512312200  1
2006 Cole JA, Trunov A, Lieberman RA. Optical hydrogen sensor for inert environments Aiche Annual Meeting, Conference Proceedings 1
2005 Elvers KT, Turner SM, Wainwright LM, Marsden G, Hinds J, Cole JA, Poole RK, Penn CW, Park SF. NssR, a member of the Crp-Fnr superfamily from Campylobacter jejuni, regulates a nitrosative stress-responsive regulon that includes both a single-domain and a truncated haemoglobin. Molecular Microbiology. 57: 735-50. PMID 16045618 DOI: 10.1111/j.1365-2958.2005.04723.x  1
2005 Browning DF, Grainger DC, Beatty CM, Wolfe AJ, Cole JA, Busby SJ. Integration of three signals at the Escherichia coli nrf promoter: a role for Fis protein in catabolite repression. Molecular Microbiology. 57: 496-510. PMID 15978080 DOI: 10.1111/J.1365-2958.2005.04701.X  1
2005 Spreadbury CL, Pallen MJ, Overton T, Behr MA, Mostowy S, Spiro S, Busby SJ, Cole JA. Point mutations in the DNA- and cNMP-binding domains of the homologue of the cAMP receptor protein (CRP) in Mycobacterium bovis BCG: implications for the inactivation of a global regulator and strain attenuation. Microbiology (Reading, England). 151: 547-56. PMID 15699203 DOI: 10.1099/Mic.0.27444-0  1
2005 Turner SM, Moir JW, Griffiths L, Overton TW, Smith H, Cole JA. Mutational and biochemical analysis of cytochrome c', a nitric oxide-binding lipoprotein important for adaptation of Neisseria gonorrhoeae to oxygen-limited growth. The Biochemical Journal. 388: 545-53. PMID 15689189 DOI: 10.1042/BJ20041766  1
2005 Filenko NA, Browning DF, Cole JA. Transcriptional regulation of a hybrid cluster (prismane) protein Biochemical Society Transactions. 33: 195-197. PMID 15667305 DOI: 10.1042/BST0330195  1
2005 Jia W, Cole JA. Nitrate and nitrite transport in Escherichia coli Biochemical Society Transactions. 33: 159-161. PMID 15667293 DOI: 10.1042/BST0330159  1
2005 Burlat B, Gwyer JD, Poock S, Clarke T, Cole JA, Hemmings AM, Cheesman MR, Butt JN, Richardson DJ. Cytochrome c nitrite reductase: From structural to physicochemical analysis Biochemical Society Transactions. 33: 137-140. PMID 15667286 DOI: 10.1042/BST0330137  1
2005 Cole JA. Supercritical combustion a fresh look at an old concept Fall Technical Meeting of the Western States Section of the Combustion Institute 2005, Wss/Ci 2005 Fall Meeting. 2: 1205-1213.  1
2005 Cole JA. Oil pollution by tankers-issues and progress 2005 International Oil Spill Conference, Iosc 2005. 6099-6101.  1
2004 Mohan SB, Schmid M, Jetten M, Cole J. Detection and widespread distribution of the nrfA gene encoding nitrite reduction to ammonia, a short circuit in the biological nitrogen cycle that competes with denitrification. Fems Microbiology Ecology. 49: 433-43. PMID 19712292 DOI: 10.1016/J.Femsec.2004.04.012  1
2004 Prum RO, Cole JA, Torres RH. Blue integumentary structural colours in dragonflies (Odonata) are not produced by incoherent Tyndall scattering. The Journal of Experimental Biology. 207: 3999-4009. PMID 15472030 DOI: 10.1242/jeb.01240  1
2004 Clarke TA, Dennison V, Seward HE, Burlat B, Cole JA, Hemmings AM, Richardson DJ. Purification and spectropotentiometric characterization of Escherichia coli NrfB, a decaheme homodimer that transfers electrons to the decaheme periplasmic nitrite reductase complex. The Journal of Biological Chemistry. 279: 41333-9. PMID 15280383 DOI: 10.1074/jbc.M407604200  1
2004 Browning DF, Cole JA, Busby SJ. Transcription activation by remodelling of a nucleoprotein assembly: the role of NarL at the FNR-dependent Escherichia coli nir promoter. Molecular Microbiology. 53: 203-15. PMID 15225315 DOI: 10.1111/j.1365-2958.2004.04104.x  1
2004 Lundberg JO, Weitzberg E, Cole JA, Benjamin N. Nitrate, bacteria and human health Nature Reviews Microbiology. 2: 593-602. PMID 15197394 DOI: 10.1038/nrmicro929  1
2004 Brondijk TH, Nilavongse A, Filenko N, Richardson DJ, Cole JA. NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing. The Biochemical Journal. 379: 47-55. PMID 14674886 DOI: 10.1042/BJ20031115  1
2003 Cole JA. ONA takes lead in forming state nurse disaster response team The Oregon Nurse. 68: 1. PMID 2003169016  1
2003 Cole JA. New safe bifurcated needle devices now available The Oregon Nurse. 68: 4. PMID 2003047934  1
2003 Cole JA. Partnerships plan for potential smallpox The Oregon Nurse. 68: 4. PMID 2003047933  1
2003 Overton T, Reid EG, Foxall R, Smith H, Busby SJ, Cole JA. Transcription activation at Escherichia coli FNR-dependent promoters by the gonococcal FNR protein: effects of a novel S18F substitution and comparisons with the corresponding substitution in E. coli FNR. Journal of Bacteriology. 185: 4734-47. PMID 12896992 DOI: 10.1128/JB.185.16.4734-4747.2003  1
2003 Gates AJ, Hughes RO, Sharp SR, Millington PD, Nilavongse A, Cole JA, Leach ER, Jepson B, Richardson DJ, Butler CS. Properties of the periplasmic nitrate reductases from Paracoccus pantotrophus and Escherichia coli after growth in tungsten-supplemented media. Fems Microbiology Letters. 220: 261-9. PMID 12670690 DOI: 10.1016/S0378-1097(03)00122-8  1
2003 Forde BG, Cole JA. Nitrate finds a place in the sun. Plant Physiology. 131: 395-400. PMID 12586864 DOI: 10.1104/pp.016139  1
2003 Lacey RF, Cole JA. Estimating water pollution risks arising from road and railway accidents Quarterly Journal of Engineering Geology and Hydrogeology. 36: 185-192. DOI: 10.1144/1470-9236/2001-45  1
2002 Angove HC, Cole JA, Richardson DJ, Butt JN. Protein film voltammetry reveals distinctive fingerprints of nitrite and hydroxylamine reduction by a cytochrome C nitrite reductase. The Journal of Biological Chemistry. 277: 23374-81. PMID 11970951 DOI: 10.1074/jbc.M200495200  1
2002 Clegg S, Yu F, Griffiths L, Cole JA. The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Molecular Microbiology. 44: 143-55. PMID 11967075 DOI: 10.1046/j.1365-2958.2002.02858.x  1
2002 Poock SR, Leach ER, Moir JW, Cole JA, Richardson DJ. Respiratory detoxification of nitric oxide by the cytochrome c nitrite reductase of Escherichia coli. The Journal of Biological Chemistry. 277: 23664-9. PMID 11960983 DOI: 10.1074/jbc.M200731200  1
2002 Browning DF, Beatty CM, Wolfe AJ, Cole JA, Busby SJ. Independent regulation of the divergent Escherichia coli nrfA and acsP1 promoters by a nucleoprotein assembly at a shared regulatory region. Molecular Microbiology. 43: 687-701. PMID 11929525 DOI: 10.1046/J.1365-2958.2002.02776.X  1
2002 Loughlin JE, Cole JA, Rothman KJ, Johnson ES. Prevalence of serious eosinophilia and incidence of Churg-Strauss syndrome in a cohort of asthma patients. Annals of Allergy, Asthma & Immunology : Official Publication of the American College of Allergy, Asthma, & Immunology. 88: 319-25. PMID 11926627 DOI: 10.1016/S1081-1206(10)62015-7  1
2002 Bamford VA, Angove HC, Seward HE, Thomson AJ, Cole JA, Butt JN, Hemmings AM, Richardson DJ. Structure and spectroscopy of the periplasmic cytochrome c nitrite reductase from Escherichia coli. Biochemistry. 41: 2921-31. PMID 11863430 DOI: 10.1021/Bi015765D  1
2001 Smith H, Yates EA, Cole JA, Parsons NJ. Lactate stimulation of gonococcal metabolism in media containing glucose: mechanism, impact on pathogenicity, and wider implications for other pathogens. Infection and Immunity. 69: 6565-72. PMID 11598023 DOI: 10.1128/IAI.69.11.6565-6572.2001  1
2001 Brigé A, Cole JA, Hagen WR, Guisez Y, Van Beeumen JJ. Overproduction, purification and novel redox properties of the dihaem cytochrome c, NapB, from Haemophilus influenzae. The Biochemical Journal. 356: 851-8. PMID 11389694 DOI: 10.1042/bj3560851  1
2001 Cole JA, Whitelaw K. Metal fluxes in the Mersey Narrows Hydrology and Earth System Sciences. 5: 103-118.  1
2001 Cole JA, Lemons JE, Eberhardt AW. Effects of resin type and irradiation level on fatigue crack growth and fracture toughness in polyethylene American Society of Mechanical Engineers, Bioengineering Division (Publication) Bed. 50: 39-40.  1
2000 Browning DF, Cole JA, Busby SJW. Suppression of FNR-dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H-NS: Modulation of transcription by a complex nucleo-protein assembly Molecular Microbiology. 37: 1258-1269. PMID 10972841 DOI: 10.1046/j.1365-2958.2000.02087.x  1
2000 Lissenden S, Mohan S, Overton T, Regan T, Crooke H, Cardinale JA, Householder TC, Adams P, O'Conner CD, Clark VL, Smith H, Cole JA. Identification of transcription activators that regulate gonococcal adaptation from aerobic to anaerobic or oxygen-limited growth. Molecular Microbiology. 37: 839-55. PMID 10972806 DOI: 10.1046/J.1365-2958.2000.02050.X  1
2000 Gao L, Linden L, Parsons NJ, Cole JA, Smith H. Uptake of metabolites by gonococci grown with lactate in a medium containing glucose: evidence for a surface location of the sialyltransferase. Microbial Pathogenesis. 28: 257-66. PMID 10799276 DOI: 10.1006/mpat.1999.0348  1
2000 Potter LC, Millington PD, Thomas GH, Rothery RA, Giordano G, Cole JA. Novel growth characteristics and high rates of nitrate reduction of an Escherichia coli strain, LCB2048, that expresses only a periplasmic nitrate reductase Fems Microbiology Letters. 185: 51-57. PMID 10731606 DOI: 10.1016/S0378-1097(00)00070-7  1
2000 Lyon RK, Cole JA. Unmixed combustion: An alternative to fire Combustion and Flame. 121: 249-261. DOI: 10.1016/S0010-2180(99)00136-4  1
2000 Cole JA. Comments Proceedings of the Combustion Institute. 28: 2658.  1
2000 Cole JA. Author's reply Proceedings of the Combustion Institute. 28: 1280.  1
2000 Byl T, Cole JA, Livingston LA. What determines the magnitude of the Q angle? A preliminary study of selected skeletal and muscular measures Journal of Sport Rehabilitation. 9: 26-34.  1
1999 Cole JA. Parathyroid hormone activates mitogen-activated protein kinase in opossum kidney cells Endocrinology. 140: 5771-5779. PMID 10579343  1
1999 Potter LC, Cole JA. Essential roles for the products of the napABCD genes, but not napFGH, in periplasmic nitrate reduction by Escherichia coli K-12 Biochemical Journal. 344: 69-76. PMID 10548535 DOI: 10.1042/0264-6021:3440069  1
1999 Thomas G, Potter L, Cole JA. The periplasmic nitrate reductase from Escherichia coli: A heterodimeric molybdoprotein with a double-arginine signal sequence and an unusual leader peptide cleavage site Fems Microbiology Letters. 174: 167-171. PMID 10234835 DOI: 10.1111/J.1574-6968.1999.TB13564.X  1
1999 Karemera D, Ojah K, Cole JA. Random walks and market efficiency tests: Evidence from emerging equity markets Review of Quantitative Finance and Accounting. 13: 171-188.  1
1998 Reid E, Eaves DJ, Cole JA. The CcmE protein from Escherichia coli is a haem-binding protein Fems Microbiology Letters. 166: 369-375. PMID 9770295  1
1998 Eaves D, Grove J, Staudenmann W, James P, Poole R, White S, Griffiths L, Cole J. The nrfEFG gene products are required for the activity of the cytochrome c552 nitrite reductase from Escherichia coli. Biochemical Society Transactions. 26: S216. PMID 9765935 DOI: 10.1042/bst026s216  1
1998 Wu HC, Tyson KL, Cole JA, Busby SJW. Regulation of transcription initiation at the Escherichia coli nir operon promoter: A new mechanism to account for co-dependence on two transcription factors Molecular Microbiology. 27: 493-505. PMID 9484902 DOI: 10.1046/j.1365-2958.1998.00699.x  1
1998 Widmer NC, Cole JA, Seeker WR, Gaspar JA. Practical limitation of mercury speciation in simulated municipal waste incinerator flue gas Combustion Science and Technology. 134: 315-326.  1
1997 Tyson K, Busby S, Cole J. Catabolite regulation of two Escherichia coli operons encoding nitrite reductases: Role of the Cra protein Archives of Microbiology. 168: 240-244. PMID 9382703 DOI: 10.1007/s002030050494  1
1997 Tyson K, Metheringham R, Griffiths L, Cole J. Characterisation of Escherichia coli K-12 mutants defective in formate-dependent nitrite reduction: Essential roles for hemN and the menFDBCE operon Archives of Microbiology. 168: 403-411. PMID 9325429 DOI: 10.1007/s002030050515  1
1997 Metheringham R, Cole JA. A reassessment of the genetic determinants, the effect of growth conditions and the availability of an electron donor on the nitrosating activity of Escherichia coli K-12 Microbiology. 143: 2647-2656. PMID 9274018  1
1997 Cole JA. Down-regulation of protein kinase C by parathyroid hormone and mezerein differentially modulates cAMP production and phosphate transport in opossum kidney cells Journal of Bone and Mineral Research. 12: 1223-1230. PMID 9258752 DOI: 10.1359/jbmr.1997.12.8.1223  1
1997 Cole JA. Tobacco litigation The New England Journal of Medicine. 336. PMID 9190493  1
1997 Dawson JF, Cole JA, Porter SJ. Modelling of transmission and reflection of thin layers for EMC applications in TLM Iee Conference Publication. 65-70.  1
1996 Metheringham R, Tyson KL, Crooke H, Missiakas D, Raina S, Cole JA. Effects of mutations in genes for proteins involved in disulphide bond formation in the periplasm on the activities of anaerobically induced electron transfer chains in Escherichia coli K12 Molecular and General Genetics. 253: 95-102. PMID 9003292 DOI: 10.1007/Pl00013815  1
1996 Gill MJ, Mcquillen DP, Van Putten JPM, Wetzler LM, Bramley J, Crooke H, Parsons NJ, Cole JA, Smith H. Functional characterization of a sialyltransferase-deficient mutant of Neisseria gonorrhoeae Infection and Immunity. 64: 3374-3378. PMID 8757878 DOI: 10.1128/Iai.64.8.3374-3378.1996  1
1996 Cole JA, Tinker MH. Laser speckle spectroscopy - A new method for using small swimming organisms as biomonitors Bioimaging. 4: 243-253. DOI: 10.1002/1361-6374(199612)4:4<243::AID-BIO3>3.0.CO;2-E  1
1996 Cole JA, Dawson JF, Porter SJ. Efficient modelling of thin conducting sheets within the TLM method Iee Conference Publication. 45-50.  1
1995 Smith H, Parsons NJ, Cole JA. Sialylation of neisserial lipopolysaccharide: A major influence on pathogenicity Microbial Pathogenesis. 19: 365-377. PMID 8852278 DOI: 10.1006/mpat.1995.0071  1
1995 Cole JA, Walker REW, Yordy MR. Hyperglycemia-induced changes in Na+/myo-inositol transport, Na+-K+-ATPase, and protein kinase C activity in proximal tubule cells Diabetes. 44: 446-452. PMID 7698515  1
1995 Robinson PJ, Walker JT, Keevil CW, Cole J. Reporter genes and fluorescent probes for studying the colonisation of biofilms in a drinking water supply line by enteric bacteria. Fems Microbiology Letters. 129: 183-8. PMID 7607399 DOI: 10.1111/J.1574-6968.1995.TB07577.X  1
1995 Cole JA, Lenz JC, Janhunen WJ. One year of pressure oxidation at the Lone Tree gold mine Mining Engineering. 47: 515-519.  1
1994 Sambongi Y, Crooke H, Cole JA, Ferguson SJ. A mutation blocking the formation of membrane or periplasmic endogenous and exogenous c-type cytochromes in Escherichia coli permits the cytoplasmic formation of Hydrogenobacter thermophilus holo cytochrome c552 Febs Letters. 344: 207-210. PMID 8187885 DOI: 10.1016/0014-5793(94)00399-8  1
1994 Iobbi-Nivol C, Crooke H, Griffiths L, Grove J, Hussain H, Pommier J, Mejean V, Cole JA. A reassessment of the range of c-type cytochromes synthesized by Escherichia coli K-12. Fems Microbiology Letters. 119: 89-94. PMID 8039676 DOI: 10.1111/J.1574-6968.1994.TB06872.X  1
1994 Tyson KL, Cole JA, Busby SJW. Nitrite and nitrate regulation at the promoters of two Escherichia coli operons encoding nitrite reductase: Identification of common target heptamers for both NarP- and NarL-dependent regulation Molecular Microbiology. 13: 1045-1055. PMID 7854119  1
1994 Parsons NJ, Constantinidou C, Cole JA, Smith H. Sialylation of lipopolysaccharide by CMP-NANA in viable gonococci is enhanced by low M(r) material released from blood cell extracts but not by some UDP sugars Microbial Pathogenesis. 16: 413-421. PMID 7830528 DOI: 10.1006/mpat.1994.1041  1
1994 Cole JA. The Right to Demand: Citizen Activism and Environmental Politics in Japan The Journal of Environment &Amp; Development. 3: 77-95. DOI: 10.1177/107049659400300207  1
1994 Cole JA, Norton RL, Montgomery HAC. Countering acute pollution events: Procedures currently being adopted in the United Kingdom Water Science and Technology. 29: 203-205.  1
1993 Tyson KL, Bell AI, Cole JA, Busby SJW. Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: Interactions between FNR and NarL Molecular Microbiology. 7: 151-157. PMID 8437517 DOI: 10.1111/j.1365-2958.1993.tb01106.x  1
1993 Cole JA, Hansen PJ. Effects of administration of recombinant bovine somatotropin on the responses of lactating and nonlactating cows to heat stress Journal of the American Veterinary Medical Association. 203: 113-117. PMID 8407442  1
1993 Belyaeva T, Griffiths L, Minchin S, Cole J, Busby S. The Escherichia coli cysG promoter belongs to the 'extended -10' class of bacterial promoters. The Biochemical Journal. 296: 851-7. PMID 7506529 DOI: 10.1042/bj2960851  1
1992 Constantinidou C, Beadle D, Zhou XH, Parsons NJ, Sammons CC, Cole JA, Smith H. A high Mr factor in human blood which confers serum resistance on gonococci: some properties and synergism with CMP-NANA Microbial Pathogenesis. 12: 421-432. PMID 1522797 DOI: 10.1016/0882-4010(92)90005-9  1
1992 Smith H, Cole JA, Parsons NJ. The sialylation of gonococcal lipopolysaccharide by host factors: A major impact on pathogenicity Fems Microbiology Letters. 100: 287-292. PMID 1478464 DOI: 10.1016/0378-1097(92)90223-B  1
1992 Cole JA, Gordon AL. Control rules for Tayside's linked system of reservoirs supplying two demand zones 1
1991 Cole JA, Slade S, Jones PD, Gregory JM. Reliable yield of reservoirs and possible effects of climatic change Hydrological Sciences Journal. 36: 579-598. DOI: 10.1080/02626669109492545  1
1990 Brownlie L, Stephenson JR, Cole JA. Characterization of two plasmids arising spontaneously in phosphate-limited continuous cultures of Escherichia coli HB101[pAT153]. Fems Microbiology Letters. 59: 173-7. PMID 2276605 DOI: 10.1016/0378-1097(90)90052-R  1
1990 Page L, Griffiths L, Cole JA. Different physiological roles of two independent pathways for nitrite reduction to ammonia by enteric bacteria Archives of Microbiology. 154: 349-354. PMID 2173895 DOI: 10.1007/BF00276530  1
1990 Brownlie L, Stephenson JR, Cole JA. Effect of growth rate on plasmid maintenance by Escherichia coli HB101(pAT153). Journal of General Microbiology. 136: 2471-80. PMID 2079631  1
1990 Bell AI, Cole JA, Busby SJW. Molecular genetic analysis of an FNR-dependent anaerobically inducible Escherichia coli promoter Molecular Microbiology. 4: 1753-1763. PMID 2077359  1
1990 Parsons NJ, Cole JA, Smith H. Resistance to human serum of gonococci in urethral exudates is reduced by neuraminidase Proceedings of the Royal Society B: Biological Sciences. 241: 3-5. PMID 1978333  1
1990 Mandrell RE, Lesse AJ, Sugai JV, Shero M, Griffiss JM, Cole JA, Parsons NJ, Smith H, Morse SA, Apicella MA. In vitro and in vivo modification of Neisseria Gonorrhoeae lipooligosaccharide epitope structure by sialylation Journal of Experimental Medicine. 171: 1649-1664. PMID 1692081  1
1990 Lyon RK, Cole JA. A reexamination of the RapreNOx process Combustion and Flame. 82: 435-443. DOI: 10.1016/0010-2180(90)90013-H  1
1990 Mohan SB, Woods N, Lyddiatt A, Cole JA. Comparision of the methods available for the purification of hybrid β-galactosidase proteins produced under the control of an anaerobically-induced promoter Biotechnology Techniques. 4: 379-384. DOI: 10.1007/BF00159382  1
1989 Jayaraman PS, Cole JA, Busby SJW. Mutational analysis of the nucleotide sequence at the FNR-dependent nirB promoter in Escherichia coli Nucleic Acids Research. 17: 135-145. PMID 2536149 DOI: 10.1093/nar/17.1.135  1
1989 Lyon RK, Kramlich JC, Cole JA. Nitrous oxide: Sources, sampling, and science policy. Where it comes from, where it goes Environmental Science and Technology. 23: 392-393. DOI: 10.1021/es00181a002  1
1989 Lyon RK, Cole JA. Kinetic modeling of artifacts in the measurement of N2O from combustion sources Combustion and Flame. 77: 139-143. DOI: 10.1016/0010-2180(89)90033-3  1
1988 Cole JA. Some new developments in anaerobic bacterial metabolism and its genetic regulation Science Progress. 72: 239-258. PMID 3293209  1
1988 Chen GM, Cole JA. The myths, facts, and theories of ethnic, small-scale enterprise financing The Review of Black Political Economy. 16: 111-123. DOI: 10.1007/BF02892168  1
1988 Cole JA. Reassessment of the role of the Fnr transcriptional activator protein in the expression of formate hydrogenlyase activity of Escherichia coli K-12 Fems Microbiology Letters. 55: 169-174.  1
1988 Chew LCK, Tacon WCA, Cole JA. Effect of growth conditions on the rate of loss of the plasmid pAT153 from continuous cultures of Escherichia coli HB101 Fems Microbiology Letters. 56: 101-104.  1
1987 Thomas HF, Cole JA, Freeman B. Plasmid pKM101 muc-- and muc-+ mediated anthracycline mutagenicity and cytotoxicity in salmonella typhimurium Environmental Mutagenesis. 9: 369-391. PMID 3556156  1
1987 Cole JA, Burkhart BR. When a placebo is not a placebo: The value of effect size measures in assessing the validity of deception used in the balanced placebo design British Journal of Addiction. 82: 649-652. PMID 3475103 DOI: 10.1111/J.1360-0443.1987.Tb01527.X  1
1987 Forsythe SJ, Cole JA. Nitrite accumulation during anaerobic nitrate reduction by binary suspensions of bacteria isolated from the achlorhydric stomach Journal of General Microbiology. 133: 1845-1849. PMID 3117970  1
1987 Griffiths L, Cole JA. Lack of redox control of the anaerobically-induced nirB+ gene of Escherichia coli K-12 Archives of Microbiology. 147: 364-369. PMID 3039936 DOI: 10.1007/BF00406134  1
1986 Thomas HF, Cole JA. Effects of excision repair and plasmid PKM101 on mutagenic and cytotoxic potencies of anthracycline derivatives in test strains of Salmonella typhimurium Environmental Mutagenesis. 8: 797-815. PMID 3536470  1
1986 Asem K, Cornish-Bowden AJ, Cole JA. A comparative study of the extracellular glucosyl- and fructosyltransferases from cariogenic and non-cariogenic Streptococcus mutans strains of two different serotypes. Microbios. 47: 53-66. PMID 2945080  1
1986 Asem KG, Kenney AC, Cole JA. Origin and function of the multiple extracellular glucosyltransferase species from cultures of a serotype c strain of Streptococcus mutans Archives of Biochemistry and Biophysics. 244: 607-618. PMID 2936305 DOI: 10.1016/0003-9861(86)90629-6  1
1986 Cole JA, Reuben LJ. Linkages between minority business characteristics and minority banks' locations The Review of Black Political Economy. 15: 73-92. DOI: 10.1007/BF02900914  1
1986 Mitchell GJ, Jones JG, Cole JA. Distribution and regulation of nitrate and nitrite reduction by Desulfovibrio and Desulfotomaculum species Archives of Microbiology. 144: 35-40. DOI: 10.1007/BF00454953  1
1986 Chew LCK, Tacon WCA, Cole JA. Increased stability of maintenance of pAT153 in Escherichia coli HB101 due to transposition of IS1 from the chromosome into the tetracycline resistance region of pAT153 Fems Microbiology Letters. 36: 275-280.  1
1985 Frieden L, Cole JA. Independence: the ultimate goal of rehabilitation for spinal cord-injured persons The American Journal of Occupational Therapy. : Official Publication of the American Occupational Therapy Association. 39: 734-739. PMID 4073196  1
1985 Macdonald H, Pope NR, Cole JA. Isolation, characterization and complementation analysis of nirB mutants of Escherichia coli deficient only in NADH-dependent nitrite reductase activity Journal of General Microbiology. 131: 2771-2782. PMID 3906030  1
1985 Cole JA, Thomas HF. Impact of a point mutation in the muc region of plasmid pKM101 on anthracycline-induced mutagenesis in Salmonella typhimurium Environmental Mutagenesis. 7: 129-133. PMID 3881252  1
1985 Cox RA, Cole JA. Chemical aspects of the autoignition of hydrocarbonair mixtures Combustion and Flame. 60: 109-123. DOI: 10.1016/0010-2180(85)90001-X  1
1985 Cole JA, Edwards AL, Hamilton EG, Reuben LJ. Black banks: A survey and analysis of the literature The Review of Black Political Economy. 14: 29-50. DOI: 10.1007/BF02902608  1
1985 Cole JA, Kramlich JC, Seeker WR. Activation and reactivity of calcareous sorbents toward sulfur dioxide Environmental Science and Technology. 19: 1065-1072.  1
1985 Whitelaw K, Cole JA, Head PC, Jones PD. Tidal fluxes of metals through the Mersey Estuary, 1982-1984 Water Science and Technology. 17: 1363-1365.  1
1984 Pope NR, Cole JA. Pyruvate and ethanol as electron donors for nitrite reduction by Escherichia coli K12 Journal of General Microbiology. 130: 1279-1284. PMID 6381645  1
1984 Tang Zi-Jin, Cole JA. Modified immunodiffusion and peroxidase staining methods to detect Escherichia coli nitrite reductase and other sirohaem-containing proteins Microbios. 40: 153-160. PMID 6207416  1
1984 Cole JA, Bittner JD, Longwell JP, Howard JB. Formation mechanisms of aromatic compounds in aliphatic flames Combustion and Flame. 56: 51-70. DOI: 10.1016/0010-2180(84)90005-1  1
1984 Cole JA, Bittner JD, Longwell JP, Howard JB. ROLE OF C//4 HYDROCARBONS IN AROMATIC SPECIES FORMATION IN ALIPHATIC FLAMES Acs Symposium Series. 3-21.  1
1983 Adshead VM, Parke JM, Chambers PJ, Davies RM, Cole JA. An in-vitro study of the role of sucrose and interactions between oral bacteria in possible mechanisms of dental plaque formation Archives of Oral Biology. 28: 723-727. PMID 6314950 DOI: 10.1016/0003-9969(83)90107-3  1
1983 Kenney AC, Cole JA. Identification of a 1,3-α glucosyltransferase involved in insoluble glucan synthesis by a serotype c strain of Streptococcus mutans Fems Microbiology Letters. 16: 159-162.  1
1982 Cole JA. Independent pathways for the anaerobic reduction of nitrite to ammonia by Escherichia coli Biochemical Society Transactions. 10: 476-478. PMID 6295832  1
1982 Jackson RH, Cole JA, Cornish-Bowden A. The steady state kinetics of the NADH-dependent nitrite reductase from Escherichia coli K12. The reduction of single-electron acceptors Biochemical Journal. 203: 505-510. PMID 6288003 DOI: 10.1042/Bj2030505  1
1982 Pope NR, Cole JA. Generation of a membrane potential by one of two independent pathways for nitrite reduction by Escherichia coli Journal of General Microbiology. 128: 219-222. PMID 6283015  1
1982 Cole JA. Advances in hydrometry. Proceedings of the Exeter symposium, 19- 30 July 1982 1
1982 Kenney AC, Cole JA. Production of much larger quantities of extracellular glucosyltransferases by continuous than by batch cultures of Streptococcus mutans Fems Microbiology Letters. 15: 99-102.  1
1982 Imperial J, Parés R, Cole JA. Defective nitrate assimilation by a derivative of Klebsiella pneumoniae strain C3 (formerly Citrobacter intermedius C3) which has lost the isocitrate dehydrogenase plasmid Fems Microbiology Letters. 13: 247-252.  1
1981 Jackson RH, Cornish-Bowden A, Cole JA. Prosthetic groups of the NADH-dependent nitrite reductase from Escherichia coli K12 Biochemical Journal. 193: 861-867. PMID 7030314 DOI: 10.1042/Bj1930861  1
1981 Jackson RH, Cole JA, Cornish-Bowden A. The steady-state kinetics of the NADH-dependent nitrite reductase from Escherichia coli K12. Nitrite and hydroxylamine reduction Biochemical Journal. 199: 171-178. PMID 6279095 DOI: 10.1042/Bj1990171  1
1980 Cole JA, Newman BM, White P. Biochemical and genetic characterization of nirB mutants of Escherichia coli K 12 pleiotropically defective in nitrite and sulphite reduction. Journal of General Microbiology. 120: 475-83. PMID 6262434  1
1980 Newman BM, White P, Mohan SB, Cole JA. Effect of dextran and ammonium sulphate on the reaction catalysed by a glucosyltransferase complex from Streptococcus mutans. Journal of General Microbiology. 118: 353-66. PMID 6160196  1
1980 Cole JA, Brown CM. Nitrite reduction to ammonia by fermentative bacteria: A short circuit in the biological nitrogen cycle Fems Microbiology Letters. 7: 65-72. DOI: 10.1016/S0378-1097(80)80001-2  1
1980 Collier CG, Cole JA, Robertson RB. The North West Weather Radar Project: the establishment of a weather radar system for hydrological forecasting ( UK) Hydrological Forecasting. Proc. Oxford Symposium, April 1980, (International Association of Hydrological Sciences, Washington Dc; Iahs-Aish Publication 129). 31-40.  1
1979 Keevil CW, Hough JS, Cole JA. Regulation of 2-oxoglutarate dehydrogenase synthesis in Citrobacter freundii by traces of oxygen in commerical nitrogen gas and by glutamate Journal of General Microbiology. 114: 355-359. PMID 541660  1
1979 Cole JA. 'What's new about independent living?' Archives of Physical Medicine and Rehabilitation. 60: 458-462. PMID 497046  1
1979 Cole JA. The deflection of an acoustic beam by temperature and salinity gradients 1
1979 Cole JA. Online flow forecasting for the River Dee ( Wales), 1976. An audio-visual explanation Modeling Hydrologic Processes. Proc. Fort Collins 3rd International Hydrology Symposium, July 1978. 333-343.  1
1979 Keevil CW, Hough JS, Cole JA. Regulation of respiratory and fermentative modes of growth of Citrobacter freundii by oxygen, nitrate and glucose Journal of General Microbiology. 113: 83-95.  1
1978 Coleman KJ, Cornish Bowden A, Cole JA. Activation of nitrite reductase from Escherichia coli K12 by oxidized nicotinamide-adenine dinucleotide Biochemical Journal. 175: 495-499. PMID 217343 DOI: 10.1042/Bj1750495  1
1978 Coleman KJ, Cornish-Bowden A, Cole JA. Purification and properties of nitrite reductase from Escherichia coli K12 Biochemical Journal. 175: 483-493. PMID 217342 DOI: 10.1042/Bj1750483  1
1978 Newman BM, Cole JA. The chromosomal location and pleiotropic effects of mutations of the nirA+ gene of Escherichia coli K12: the essential role of nirA+ in nitrite reduction and in other anaerobic redox reactions. Journal of General Microbiology. 106: 1-12. PMID 206651  1
1978 Ezekiel S, Cole JA, Harrison J, Sanders G. PASSIVE CAVITY OPTICAL ROTATION SENSOR. Laser Inertial Rotation Sensors. 157: 68-72. DOI: 10.1117/12.965467  1
1978 Cole JA. The rapid accumulation of large quantities of ammonia during nitrite reduction by Escherichia coli Fems Microbiology Letters. 4: 327-329.  1
1978 Swain HM, Somerville HJ, Cole JA. Denitrification during growth of Pseudomonas aeruginosa on octane Journal of General Microbiology. 107: 103-112.  1
1977 Keevil CW, Hough JS, Cole JA. Prototrophic growth of Citrobacter freundii and the biochemical basis for its apparent growth requirements in aerated media Journal of General Microbiology. 98: 273-276. PMID 833571  1
1977 Cole JA. A biochemical approach to the control of dental caries Biochemical Society Transactions. 5: 1232-1239. PMID 334596  1
1977 Newman BM, Cole JA. Lack of a regulatory function for glutamine synthetase protein in the synthesis of glutamate dehydrogenase and nitrite reductase in Escherichia coli K12. Journal of General Microbiology. 98: 369-77. PMID 16079  1
1977 Browning KA, Bussell RB, Cole JA. RADAR FOR RAIN FORECASTING AND RIVER MANAGEMENT Int Water Power Dam Constr. 29: 38-42.  1
1977 Keevil CW, Hough JS, Cole JA. The effects of glucose, succinate and cyclic adenosine 3′,5′-monophosphate on the synthesis of tricarboxylic acid cycle enzymes and respiratory components in Citrobacter freundii Fems Microbiology Letters. 1: 329-331.  1
1976 Cole JA. Microbial Gas Metabolism Advances in Microbial Physiology. 14: 1-92. PMID 188319 DOI: 10.1016/S0065-2911(08)60226-X  1
1976 Cole JA. Design and operation of water resource systems Hydrological Sciences Bulletin. 21: 47-52. DOI: 10.1080/02626667609491602  1
1976 Cole JA. TAYLOR-VORTEX INSTABILITY AND ANNULUS-LENGTH EFFECTS Journal of Fluid Mechanics. 75: 1-15. DOI: 10.1017/S0022112076000098  1
1975 Cole JA, McKerchar AI, Moore RJ. ON-LINE FORECASTING SYSTEM, INCORPORATING RADAR MEASUREMENTS OF RAINFALL, AS USED TO ASSIST THE SHORT-TERM REGULATION OF THE RIVER DEE IN NORTH WALES . 57-66.  1
1974 Cole JA, Coleman KJ, Compton BE, Kavanagh BM, Keevil CW. Nitrite and ammonia assimilation by anaerobic continuous cultures of Escherichia coli Journal of General Microbiology. 85: 11-22. PMID 4154967 DOI: 10.1099/00221287-85-1-11  1
1974 Cole JA. Review of the ifac symposium on control of water resources systems Hydrological Sciences Bulletin. 19: 275. DOI: 10.1080/02626667409493913  1
1974 Cole JA. Taylor vortex instability and annulus length effects Nature. 252: 688-689. DOI: 10.1038/252688a0  1
1974 Cole JA. TAYLOR VORTICES WITH SHORT ROTATING CYLINDERS Journal of Fluids Engineering, Transactions of the Asme. 96: 69-70.  1
1974 Cole JA. TAYLOR VORTEX BEHAVIOUR IN ANNULAR CLEARANCES OF LIMITED LENGTH . 514-521.  1
1974 COLE JA, DAVIS JM. IDENTIFICATION OF AQUIFER CONSTANTS: TEST OF TWO INVERSE METHODS . 1974.  1
1974 Cole JA, Davis JM. IDENTIFICATION OF AQUIFER CONSTANTS: TESTS OF TWO INVERSE METHODS . 451-453.  1
1973 Priest FG, Somerville HJ, Cole JA, Hough JS. The taxonomic position of Obesumbacterium proteus, a common brewery contaminant Journal of General Microbiology. 75: 295-307. PMID 4706971  1
1973 Cole JA. Abnormally low activities of fumarate hydratase and malate dehydrogenase in oxygen sensitive cultures of Spirillum volutans Journal of General Microbiology. 78: 371-374. PMID 4148677  1
1973 Cole JA, Ward FB. Nitrite reductase deficient mutants of Escherichia coli K12 Journal of General Microbiology. 76: 21-29. PMID 4146659  1
1973 COLE JA, HIRSCH H, BATHURST PH. CALCULATING AQUIFER PROPERTIES AND BASE FLOW COMPENSATION 1
1972 Cole JA. Base composition of deoxyribonucleic acid from Spirillum volutans, S. serpens and S. itersonii Journal of General Microbiology. 72: 411-413. PMID 5078562  1
1972 Cole JA, Sherriff JDF. Some single- and multi-site models of rainfall within discrete time increments Journal of Hydrology. 17: 97-113. DOI: 10.1016/0022-1694(72)90068-6  1
1971 Cole JA, Rittenberg SC. A comparison of respiratory processes in Spirillum volutans, Spirillum itersonii and Spirillum serpens. Journal of General Microbiology. 69: 375-383. PMID 4335582  1
1971 Cole JA. Nitrite reductase-deficient mutants of Escherichia coli K12 Journal of General Microbiology. 65. PMID 4326639  1
1969 Cole JA. Taylor vortices with eccentric rotating cylinders [4] Nature. 221: 253-254. DOI: 10.1038/221253a0  1
1968 Cole JA, Wimpenny JWT. Metabolic pathways for nitrate reduction in Escherichia coli Bba - Bioenergetics. 162: 39-48. PMID 4385809  1
1968 Venables WA, Wimpenny JWT, Cole JA. Enzymic properties of a mutant of Escherichia coli K12 lacking nitrate reductase Archiv FüR Mikrobiologie. 63: 117-121. PMID 4302940 DOI: 10.1007/BF00412166  1
1968 Cole JA. Cytochrome c552 and nitrite reduction in Escherichia coli Bba - Bioenergetics. 162: 356-368. PMID 4300594  1
1968 Schweig Z, Cole JA. Optimal Control of Linked Reservoirs Water Resources Research. 4: 479-497. DOI: 10.1029/WR004i003p00479  1
1967 Wimpenny JWT, Cole JA. The regulation of metabolism in facultative bacteria III. The effect of nitrate Bba - General Subjects. 148: 233-242. PMID 4864932  1
1966 Cole JA. Observations of the effect of annulus length on Taylor vortex critical speeds 1
1966 Cole JA, Wimpenny JWT. The inter-relationships of low redox potential cytochrome c552 and hydrogenase in facultative anaerobes Bba - Enzymology Andbiological Oxidation. 128: 419-425.  1
1965 COLE JA, HUGHES DE. THE METABOLISM OF POLYPHOSPHATES IN CHLOROBIUM THIOSULFATOPHILUM Journal of General Microbiology. 38: 65-72. PMID 14283038  1
1955 Cole JA, Hughes CJ. Oil Film Extent in Complete Journal Bearings Industrial Lubrication and Tribology. 7: 16-22. DOI: 10.1108/eb052340  1
1951 Cole JA. A note on the Low Pressure Regions occurring in the Hydrodynamic Lubricating Films of Journal Bearings Industrial Lubrication and Tribology. 3: 10-13. DOI: 10.1108/eb053433  1
1949 Cole JA, Oakes DB, Slade S, Clark KJ. Potential impacts of climatic change and of sea-level rise on the yields of aquifer, river and reservoir sources Journal of the Chartered Institution of Water and Environmental Management. 8: 591-606. DOI: 10.1111/j.1747-6593.1994.tb01156.x  1
1949 Cole JA, Oakes DB, Slade S, Clark KJ. Potential impacts of climatic change and of sea-level rise on the yields of aquifer, river and reservoir sources Journal of the Chartered Institution of Water and Environmental Management. 8: 591-606.  1
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