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Vesteinn Thorsson - Publications

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18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2009 Nykter M, Lähdesmäki H, Rust A, Thorsson V, Shmulevich I. A data integration framework for prediction of transcription factor targets. Annals of the New York Academy of Sciences. 1158: 205-14. PMID 19348642 DOI: 10.1111/J.1749-6632.2008.03758.X  0.388
2008 Thuong NT, Dunstan SJ, Chau TT, Thorsson V, Simmons CP, Quyen NT, Thwaites GE, Thi Ngoc Lan N, Hibberd M, Teo YY, Seielstad M, Aderem A, Farrar JJ, Hawn TR. Identification of tuberculosis susceptibility genes with human macrophage gene expression profiles. Plos Pathogens. 4: e1000229. PMID 19057661 DOI: 10.1371/Journal.Ppat.1000229  0.304
2008 Ramsey SA, Klemm SL, Zak DE, Kennedy KA, Thorsson V, Li B, Gilchrist M, Gold ES, Johnson CD, Litvak V, Navarro G, Roach JC, Rosenberger CM, Rust AG, Yudkovsky N, et al. Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics. Plos Computational Biology. 4: e1000021. PMID 18369420 DOI: 10.1371/Journal.Pcbi.1000021  0.394
2008 Korb M, Rust AG, Thorsson V, Battail C, Li B, Hwang D, Kennedy KA, Roach JC, Rosenberger CM, Gilchrist M, Zak D, Johnson C, Marzolf B, Aderem A, Shmulevich I, et al. The Innate Immune Database (IIDB). Bmc Immunology. 9: 7. PMID 18321385 DOI: 10.1186/1471-2172-9-7  0.433
2007 Bonneau R, Facciotti MT, Reiss DJ, Schmid AK, Pan M, Kaur A, Thorsson V, Shannon P, Johnson MH, Bare JC, Longabaugh W, Vuthoori M, Whitehead K, Madar A, Suzuki L, et al. A predictive model for transcriptional control of physiology in a free living cell. Cell. 131: 1354-65. PMID 18160043 DOI: 10.1016/J.Cell.2007.10.053  0.552
2007 Carter GW, Prinz S, Neou C, Shelby JP, Marzolf B, Thorsson V, Galitski T. Prediction of phenotype and gene expression for combinations of mutations. Molecular Systems Biology. 3: 96. PMID 17389876 DOI: 10.1038/Msb4100137  0.424
2006 Gilchrist M, Thorsson V, Li B, Rust AG, Korb M, Roach JC, Kennedy K, Hai T, Bolouri H, Aderem A. Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4. Nature. 441: 173-8. PMID 16688168 DOI: 10.1038/Nature04768  0.353
2006 Bonneau R, Reiss DJ, Shannon P, Facciotti M, Hood L, Baliga NS, Thorsson V. The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo. Genome Biology. 7: R36. PMID 16686963 DOI: 10.1186/Gb-2006-7-5-R36  0.547
2005 Thorsson V, Hörnquist M, Siegel AF, Hood L. Reverse engineering galactose regulation in yeast through model selection. Statistical Applications in Genetics and Molecular Biology. 4: Article28. PMID 16646846 DOI: 10.2202/1544-6115.1118  0.337
2005 Reiss DJ, Avila-Campillo I, Thorsson V, Schwikowski B, Galitski T. Tools enabling the elucidation of molecular pathways active in human disease: application to Hepatitis C virus infection. Bmc Bioinformatics. 6: 154. PMID 15967031 DOI: 10.1186/1471-2105-6-154  0.34
2005 Drees BL, Thorsson V, Carter GW, Rives AW, Raymond MZ, Avila-Campillo I, Shannon P, Galitski T. Derivation of genetic interaction networks from quantitative phenotype data. Genome Biology. 6: R38. PMID 15833125 DOI: 10.1186/Gb-2005-6-4-R38  0.314
2004 Tian Q, Stepaniants SB, Mao M, Weng L, Feetham MC, Doyle MJ, Yi EC, Dai H, Thorsson V, Eng J, Goodlett D, Berger JP, Gunter B, Linseley PS, Stoughton RB, et al. Integrated genomic and proteomic analyses of gene expression in Mammalian cells. Molecular & Cellular Proteomics : McP. 3: 960-9. PMID 15238602 DOI: 10.1074/Mcp.M400055-Mcp200  0.315
2001 Ideker T, Thorsson V, Ranish JA, Christmas R, Buhler J, Eng JK, Bumgarner R, Goodlett DR, Aebersold R, Hood L. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science (New York, N.Y.). 292: 929-34. PMID 11340206 DOI: 10.1126/Science.292.5518.929  0.344
2000 Ideker T, Thorsson V, Siegel AF, Hood LE. Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 7: 805-17. PMID 11382363 DOI: 10.1089/10665270050514945  0.36
2000 Ng WV, Kennedy SP, Mahairas GG, Berquist B, Pan M, Shukla HD, Lasky SR, Baliga NS, Thorsson V, Sbrogna J, Swartzell S, Weir D, Hall J, Dahl TA, Welti R, et al. Genome sequence of Halobacterium species NRC-1. Proceedings of the National Academy of Sciences of the United States of America. 97: 12176-81. PMID 11016950 DOI: 10.1073/Pnas.190337797  0.401
2000 Bystroff C, Thorsson V, Baker D. HMMSTR: a hidden Markov model for local sequence-structure correlations in proteins. Journal of Molecular Biology. 301: 173-90. PMID 10926500 DOI: 10.1006/Jmbi.2000.3837  0.521
2000 Ideker TE, Thorsson V, Karp RM. Discovery of regulatory interactions through perturbation: inference and experimental design. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 305-16. PMID 10902179 DOI: 10.1142/9789814447331_0029  0.307
2000 Roach JC, Thorsson V, Siegel AF. Parking strategies for genome sequencing. Genome Research. 10: 1020-30. PMID 10899151 DOI: 10.1101/Gr.10.7.1020  0.349
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