| Year |
Citation |
Score |
| 2024 |
Bacurio JHT, Yawson P, Thomforde J, Zhang Q, Kumar HV, Den Hartog H, Tretyakova NY, Basu AK. 5-Formylcytosine mediated DNA-peptide cross-link induces predominantly semi-targeted mutations in both Escherichia coli and human cells. The Journal of Biological Chemistry. 105786. PMID 38401843 DOI: 10.1016/j.jbc.2024.105786 |
0.318 |
|
| 2023 |
Essawy M, Chesner L, Alshareef D, Ji S, Tretyakova N, Campbell C. Ubiquitin signaling and the proteasome drive human DNA-protein crosslink repair. Nucleic Acids Research. PMID 37843153 DOI: 10.1093/nar/gkad860 |
0.363 |
|
| 2023 |
Zhang Q, Tretyakova N. Incorporation of inosine into DNA by human polymerase eta (Polη): kinetics of nucleotide misincorporation and structural basis for the mutagenicity. The Biochemical Journal. 480: 1479-1483. PMID 37746864 DOI: 10.1042/BCJ20230159 |
0.434 |
|
| 2023 |
Jokipii Krueger CC, Moran E, Tessier KM, Tretyakova NY. Isotope Labeling Mass Spectrometry to Quantify Endogenous and Exogenous DNA Adducts and Metabolites of 1,3-Butadiene In Vivo. Chemical Research in Toxicology. PMID 37477250 DOI: 10.1021/acs.chemrestox.3c00141 |
0.477 |
|
| 2023 |
Martella G, Gorokhova E, Sousa PFM, Tretyakova NY, Sundelin B, Motwani HV. DNA Adductomics for the Biological Effect Assessment of Contaminant Exposure in Marine Sediments. Environmental Science & Technology. PMID 37341092 DOI: 10.1021/acs.est.3c00499 |
0.452 |
|
| 2021 |
Pujari SS, Tretyakova N. Synthesis and polymerase bypass studies of DNA-peptide and DNA-protein conjugates. Methods in Enzymology. 661: 363-405. PMID 34776221 DOI: 10.1016/bs.mie.2021.09.005 |
0.425 |
|
| 2021 |
Pujari SS, Krueger CCJ, Chao C, Hutchins S, Hurben AK, Boysen G, Tretyakova NY. DEB-FAPy-dG Adducts of 1,3-Butadiene: Synthesis, Structural Characterization, and Formation in 1,2,3,4-Diepoxybutane Treated DNA. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 34767297 DOI: 10.1002/chem.202103245 |
0.485 |
|
| 2021 |
Erber L, Goodman S, Wright FA, Chiu WA, Tretyakova NY, Rusyn I. Intra- and Inter-Species Variability in Urinary N7-(1-Hydroxy-3-buten-2-yl)guanine Adducts Following Inhalation Exposure to 1,3-Butadiene. Chemical Research in Toxicology. 34: 2375-2383. PMID 34726909 DOI: 10.1021/acs.chemrestox.1c00291 |
0.319 |
|
| 2021 |
Erber L, Goodman S, Jokipii Krueger CC, Rusyn I, Tretyakova N. Quantitative NanoLC/NSI-HRMS Method for 1,3-Butadiene Induced -N7-guanine DNA-DNA Cross-Links in Urine. Toxics. 9. PMID 34678943 DOI: 10.3390/toxics9100247 |
0.476 |
|
| 2021 |
Pujari SS, Wu M, Thomforde J, Wang ZA, Chao C, Olson N, Erber L, Pomerantz WCK, Cole P, Tretyakova NY. Site-Specific 5-Formyl Cytosine Mediated DNA-Histone Cross-Links: Synthesis and Polymerase Bypass by Human DNA Polymerase η. Angewandte Chemie (International Ed. in English). PMID 34634172 DOI: 10.1002/anie.202109418 |
0.433 |
|
| 2021 |
Rajczewski AT, Ndreu L, Pujari SS, Griffin TJ, Törnqvist MÅ, Karlsson I, Tretyakova NY. Novel 4-Hydroxybenzyl Adducts in Human Hemoglobin: Structures and Mechanisms of Formation. Chemical Research in Toxicology. PMID 34110810 DOI: 10.1021/acs.chemrestox.1c00111 |
0.32 |
|
| 2021 |
Thomforde J, Fu I, Rodriguez F, Pujari SS, Broyde S, Tretyakova N. Translesion Synthesis Past 5-Formylcytosine-Mediated DNA-Peptide Cross-Links by hPolη Is Dependent on the Local DNA Sequence. Biochemistry. PMID 34080848 DOI: 10.1021/acs.biochem.1c00130 |
0.434 |
|
| 2020 |
Han Q, Kono TJY, Knutson CG, Parry NM, Seiler CL, Fox JG, Tannenbaum SR, Tretyakova NY. Multi-Omics Characterization of Inflammatory Bowel Disease-Induced Hyperplasia/Dysplasia in the / Mouse Model. International Journal of Molecular Sciences. 22. PMID 33396408 DOI: 10.3390/ijms22010364 |
0.448 |
|
| 2020 |
Boysen G, Arora R, Degner A, Vevang KR, Chao C, Rodriguez F, Walmsley SJ, Erber L, Tretyakova NY, Peterson LA. Effects of Genotype on the Detoxification of 1,3-Butadiene Derived Diepoxide and Formation of Promutagenic DNA-DNA Cross-Links in Human Hapmap Cell Lines. Chemical Research in Toxicology. PMID 33381973 DOI: 10.1021/acs.chemrestox.0c00376 |
0.319 |
|
| 2020 |
Kotandeniya D, Rogers MS, Fernandez J, Kanugula S, Hudson RHE, Rodriguez F, Lipscomb JD, Tretyakova N. 6-phenylpyrrolocytosine as a fluorescent probe to examine nucleotide flipping catalyzed by a DNA repair protein. Biopolymers. e23405. PMID 33098572 DOI: 10.1002/bip.23405 |
0.351 |
|
| 2020 |
Ndreu L, Erber LN, Törnqvist M, Tretyakova NY, Karlsson I. Characterizing Adduct Formation of Electrophilic Skin Allergens with Human Serum Albumin and Hemoglobin. Chemical Research in Toxicology. PMID 32875789 DOI: 10.1021/Acs.Chemrestox.0C00271 |
0.323 |
|
| 2020 |
Seiler CL, Song JUM, Kotandeniya D, Chen J, Kono TJY, Han Q, Colwell M, Auch B, Sarver AL, Upadhyaya P, Ren Y, Faulk C, De Flora S, La Maestra S, Chen Y, ... ... Tretyakova NY, et al. Inhalation exposure to cigarette smoke and inflammatory agents induces epigenetic changes in the lung. Scientific Reports. 10: 11290. PMID 32647312 DOI: 10.1038/S41598-020-67502-8 |
0.372 |
|
| 2020 |
Ming X, Michaelson-Richie ED, Groehler AS, Villalta PW, Campbell C, Tretyakova NY. Cross-linking of the DNA repair protein O-alkylguanine DNA alkyltransferase to DNA in the presence of cisplatin. Dna Repair. 89: 102840. PMID 32283495 DOI: 10.1016/J.Dnarep.2020.102840 |
0.569 |
|
| 2020 |
Degner A, Arora R, Erber L, Chao C, Peterson LA, Tretyakova NY. Interindividual Differences in DNA Adduct Formation and Detoxification of 1,3-Butadiene Derived Epoxide in Human Hapmap Cell Lines. Chemical Research in Toxicology. PMID 32237725 DOI: 10.1021/Acs.Chemrestox.9B00517 |
0.379 |
|
| 2020 |
Peterson LA, Balbo S, Fujioka N, Hatsukami DK, Hecht SS, Murphy SE, Stepanov I, Tretyakova N, Turesky RJ, Villalta PW. Applying tobacco, environmental and dietary-related biomarkers to understand cancer etiology and evaluate prevention strategies. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 32051197 DOI: 10.1158/1055-9965.Epi-19-1356 |
0.399 |
|
| 2020 |
Gorokhova E, Martella G, Motwani NH, Tretyakova NY, Sundelin B, Motwani HV. DNA epigenetic marks are linked to embryo aberrations in amphipods. Scientific Reports. 10: 655. PMID 31959811 DOI: 10.1038/S41598-020-57465-1 |
0.498 |
|
| 2019 |
Jokipii Krueger CC, Madugundu G, Degner A, Patel Y, Stram DO, Church TR, Tretyakova N. Urinary N7-(1-hydroxy-3-buten-2-yl) guanine adducts in humans: temporal stability and association with smoking. Mutagenesis. PMID 31702786 DOI: 10.1093/Mutage/Gez030 |
0.335 |
|
| 2019 |
Ji S, Park D, Kropachev K, Kolbanovskiy M, Fu I, Broyde S, Essawy M, Geacintov NE, Tretyakova NY. 5-Formylcytosine-induced DNA-peptide cross-links reduce transcription efficiency, but do not do cause transcription errors in human cells. The Journal of Biological Chemistry. PMID 31597704 DOI: 10.1074/Jbc.Ra119.009834 |
0.498 |
|
| 2019 |
Ji S, Thomforde J, Rogers C, Fu I, Broyde S, Tretyakova NY. Transcriptional Bypass of DNA-protein and DNA-peptide Conjugates by T7 RNA Polymerase. Acs Chemical Biology. PMID 31573793 DOI: 10.1021/Acschembio.9B00365 |
0.5 |
|
| 2019 |
Walker VE, Degner A, Carter EW, Nicklas JA, Walker DM, Tretyakova N, Albertini RJ. 1,3-Butadiene metabolite 1,2,3,4 diepoxybutane induces DNA adducts and micronuclei but not t(9;22) translocations in human cells. Chemico-Biological Interactions. 108797. PMID 31422076 DOI: 10.1016/J.Cbi.2019.108797 |
0.428 |
|
| 2019 |
Naldiga S, Ji S, Thomforde J, Nicolae CM, Lee M, Zhang Z, Moldovan GL, Tretyakova NY, Basu AK. Error-prone replication of a 5-formylcytosine-mediated DNA-peptide cross-link in human cells. The Journal of Biological Chemistry. PMID 31138652 DOI: 10.1074/Jbc.Ra119.008879 |
0.505 |
|
| 2019 |
Seiler CL, Song JM, Fernandez J, Abrahante JE, Kono T, Chen Y, Ren Y, Kassie F, Tretyakova NY. Epigenetic Changes in Alveolar Type II Lung Cells of A/J Mice Following Intranasal Treatment with Lipopolysaccharide. Chemical Research in Toxicology. PMID 30942577 DOI: 10.1021/Acs.Chemrestox.9B00015 |
0.322 |
|
| 2018 |
Lewis L, Chappell GA, Kobets T, O'Brian BE, Sangaraju D, Kosyk O, Bodnar W, Tretyakova NY, Pogribny IP, Rusyn I. Sex-specific differences in genotoxic and epigenetic effects of 1,3-butadiene among mouse tissues. Archives of Toxicology. PMID 30552462 DOI: 10.1007/S00204-018-2374-X |
0.758 |
|
| 2018 |
Yang K, Park D, Tretyakova NY, Greenberg MM. Histone tails decrease N7-methyl-2'-deoxyguanosine depurination and yield DNA-protein cross-links in nucleosome core particles and cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 30429328 DOI: 10.1073/Pnas.1813338115 |
0.506 |
|
| 2018 |
Degner A, Carlsson H, Karlsson I, Eriksson J, Pujari SS, Tretyakova NY, Törnqvist MÅ. Discovery of Novel N-(4-Hydroxybenzyl)valine Hemoglobin Adducts in Human Blood. Chemical Research in Toxicology. PMID 30375232 DOI: 10.1021/Acs.Chemrestox.8B00173 |
0.461 |
|
| 2018 |
Seiler CL, Fernandez J, Koerperich Z, Andersen MP, Kotandeniya D, Nguyen ME, Sham YY, Tretyakova NY. Maintenance DNA methyltransferase activity in the presence of oxidized forms of 5-methylcytosine: Structural basis for TET-mediated DNA demethylation. Biochemistry. PMID 30230311 DOI: 10.1021/Acs.Biochem.8B00683 |
0.515 |
|
| 2018 |
Ji S, Fu I, Naldiga S, Shao H, Basu AK, Broyde S, Tretyakova NY. 5-Formylcytosine mediated DNA-protein cross-links block DNA replication and induce mutations in human cells. Nucleic Acids Research. PMID 30184121 DOI: 10.1093/Nar/Gky809 |
0.514 |
|
| 2018 |
Groehler Iv AS, Najjar D, Pujari SS, Sangaraju D, Tretyakova NY. N-(2-deoxy-D- erythro-pentofuranosyl)-2,6-diamino-3,4-dihydro-4-oxo-5- N-(2-hydroxy-3-buten-1-yl)-formamidopyrimidine (EB-Fapy-dG) Adducts of 1,3-Butadiene: Synthesis, Structural Identification, and Detection in Human Cells. Chemical Research in Toxicology. PMID 30016111 DOI: 10.1021/Acs.Chemrestox.8B00123 |
0.81 |
|
| 2018 |
Ji S, Fu I, Naldiga S, Shao H, Basu AK, Broyde S, Tretyakova NY. 5-Formylcytosine mediated DNA-protein cross-links block DNA replication and induce mutations in human cells. Nucleic Acids Research. PMID 29905846 DOI: 10.1093/Nar/Gky444 |
0.507 |
|
| 2018 |
Pujari SS, Zhang Y, Ji S, Distefano MD, Tretyakova NY. Site-specific cross-linking of proteins to DNA via a new bioorthogonal approach employing oxime ligation. Chemical Communications (Cambridge, England). PMID 29851420 DOI: 10.1039/C8Cc01300D |
0.528 |
|
| 2018 |
Matter B, Seiler CL, Murphy K, Ming X, Zhao J, Lindgren B, Jones R, Tretyakova N. Mapping Three Guanine Oxidation Products along DNA Following Exposure to Three Types of Reactive Oxygen Species. Free Radical Biology & Medicine. PMID 29702150 DOI: 10.1016/J.Freeradbiomed.2018.04.561 |
0.47 |
|
| 2018 |
Groehler A, Kren S, Li Q, Robledo-Villafane M, Schmidt J, Garry M, Tretyakova N. Oxidative cross-linking of proteins to DNA following ischemia-reperfusion injury. Free Radical Biology & Medicine. 120: 89-101. PMID 29540307 DOI: 10.1016/J.Freeradbiomed.2018.03.010 |
0.368 |
|
| 2018 |
Kotandeniya D, Seiler CL, Fernandez J, Pujari SS, Curwick L, Murphy K, Wickramaratne S, Yan S, Murphy D, Sham YY, Tretyakova NY. Can 5-methylcytosine analogues with extended alkyl side chains guide DNA methylation? Chemical Communications (Cambridge, England). PMID 29323674 DOI: 10.1039/C7Cc06867K |
0.506 |
|
| 2018 |
Bovee R, Pham V, Fernandez J, Tretyakova N, Thomas DD. Nitric oxide is an epigenetic regulator of gene expression by directly controlling DNA methylation patterns Free Radical Biology and Medicine. 120: S114. DOI: 10.1016/J.Freeradbiomed.2018.04.375 |
0.333 |
|
| 2017 |
Ji S, Shao H, Han Q, Seiler CL, Tretyakova N. Reversible DNA-protein cross-linking at epigenetic DNA marks. Angewandte Chemie (International Ed. in English). PMID 28898504 DOI: 10.1002/Anie.201708286 |
0.514 |
|
| 2017 |
Chesner LN, Degner A, Sangaraju D, Yomtoubian S, Wickramaratne S, Malayappan B, Tretyakova N, Campbell C. Cellular Repair of DNA-DNA Cross-Links Induced by 1,2,3,4-Diepoxybutane. International Journal of Molecular Sciences. 18. PMID 28524082 DOI: 10.3390/Ijms18051086 |
0.782 |
|
| 2017 |
Pang J, Shen N, Yan F, Zhao N, Dou L, Wu LC, Seiler CL, Yu L, Yang K, Bachanova V, Weaver E, Tretyakova NY, Liu S. Thymoquinone exerts potent growth-suppressive activity on leukemia through DNA hypermethylation reversal in leukemia cells. Oncotarget. PMID 28415607 DOI: 10.18632/Oncotarget.16431 |
0.473 |
|
| 2017 |
Chang SC, Seneviratne UI, Wu J, Tretyakova NY, Essigmann JM. 1,3-Butadiene-induced adenine DNA adducts are genotoxic but only weakly mutagenic when replicated in Escherichia coli of various repair and replication backgrounds. Chemical Research in Toxicology. PMID 28394575 DOI: 10.1021/Acs.Chemrestox.7B00064 |
0.822 |
|
| 2017 |
Boldry EJ, Patel YM, Kotapati S, Esades A, Park SL, Tiirikainen M, Stram DO, LeMarchand L, Tretyakova N. Genetic Determinants of 1,3-Butadiene Metabolism and Detoxification in Three Populations of Smokers with Different Risks of Lung Cancer. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 28292921 DOI: 10.1158/1055-9965.Epi-16-0838 |
0.706 |
|
| 2017 |
Ming X, Michaelson-Richie ED, Groehler A, Villalta PW, Campbell C, Tretyakova NY. Mass Spectrometry Based Proteomics Study of Cisplatin-Induced DNA-Protein Cross-Linking in Human Fibrosarcoma (HT1080) Cells. Chemical Research in Toxicology. PMID 28282121 DOI: 10.1021/Acs.Chemrestox.6B00389 |
0.563 |
|
| 2016 |
Groehler A, Degner A, Tretyakova NY. Mass Spectrometry Based Tools to Characterize DNA-Protein Cross-Linking by Bis-electrophiles. Basic & Clinical Pharmacology & Toxicology. PMID 28032943 DOI: 10.1111/Bcpt.12751 |
0.531 |
|
| 2016 |
Sangaraju D, Boldry EJ, Patel YM, Walker V, Stepanov I, Stram DO, Hatsukami DK, Tretyakova NY. Isotope dilution nanoLC/ESI(+)-HRMS(3) quantitation of urinary N7-(1-hydroxy-3-buten-2-yl) guanine adducts in humans and their use as biomarkers of exposure to 1, 3-butadiene. Chemical Research in Toxicology. PMID 27997139 DOI: 10.1021/Acs.Chemrestox.6B00407 |
0.758 |
|
| 2016 |
Pujari SS, Tretyakova N. Chemical Biology of N-Substituted Formamidopyrimidine DNA Adducts. Chemical Research in Toxicology. 30: 434-452. PMID 27959490 DOI: 10.1021/Acs.Chemrestox.6B00392 |
0.532 |
|
| 2016 |
Pande P, Ji S, Mukherjee S, Schärer OD, Tretyakova NY, Basu AK. Mutagenicity of a model DNA-peptide cross-link in human cells: Roles of translesion synthesis DNA polymerases. Chemical Research in Toxicology. PMID 27951635 DOI: 10.1021/Acs.Chemrestox.6B00397 |
0.492 |
|
| 2016 |
Wickramaratne S, Ji S, Mukherjee S, Su Y, Pence MG, Lior-Hoffmann L, Fu I, Broyde S, Guengerich FP, Distefano M, Scharer OD, Sham YY, Tretyakova N. Bypass of DNA-Protein Cross-links Conjugated to the 7-Deazaguanine Position of DNA by Translesion Synthesis Polymerases. The Journal of Biological Chemistry. PMID 27621316 DOI: 10.1074/Jbc.M116.745257 |
0.539 |
|
| 2016 |
Wickramaratne SS, Banda D, Ji S, Manlove AH, Malayappan B, Nuñez NN, Samson LD, Campbell C, David SS, Tretyakova NY. Base Excision Repair of N(6)-Deoxyadenosine Adducts of 1,3-Butadiene. Biochemistry. PMID 27552084 DOI: 10.1021/Acs.Biochem.6B00553 |
0.495 |
|
| 2016 |
Groehler A, Villalta PW, Campbell C, Tretyakova N. Covalent DNA-Protein Cross-Linking by Phosphoramide Mustard and Nornitrogen Mustard in Human Cells. Chemical Research in Toxicology. 29: 190-202. PMID 26692166 DOI: 10.1021/acs.chemrestox.5b00430 |
0.52 |
|
| 2016 |
Groehler A, Villalta PW, Campbell C, Tretyakova N. Covalent DNA-Protein Cross-Linking by Phosphoramide Mustard and Nornitrogen Mustard in Human Cells Chemical Research in Toxicology. 29: 190-202. DOI: 10.1021/Acs.Chemrestox.5B00430 |
0.551 |
|
| 2015 |
Wickramaratne S, Seiler CL, Tretyakova NY. Synthesis of DNA Oligodeoxynucleotides Containing Site-Specific 1,3-Butadiene-Deoxyadenosine Lesions. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. 61: 4.61.1-22. PMID 26344227 DOI: 10.1002/0471142700.Nc0461S61 |
0.564 |
|
| 2015 |
Kotapati S, Wickramaratne S, Esades A, Boldry EJ, Quirk Dorr D, Pence MG, Guengerich FP, Tretyakova NY. Polymerase Bypass of N(6)-Deoxyadenosine Adducts Derived from Epoxide Metabolites of 1,3-Butadiene. Chemical Research in Toxicology. 28: 1496-507. PMID 26098310 DOI: 10.1021/Acs.Chemrestox.5B00166 |
0.77 |
|
| 2015 |
Tretyakova NY, Groehler A, Ji S. DNA-Protein Cross-Links: Formation, Structural Identities, and Biological Outcomes. Accounts of Chemical Research. 48: 1631-44. PMID 26032357 DOI: 10.1021/Acs.Accounts.5B00056 |
0.515 |
|
| 2015 |
McFaline-Figueroa JL, Braun CJ, Stanciu M, Nagel ZD, Mazzucato P, Sangaraju D, Cerniauskas E, Barford K, Vargas A, Chen Y, Tretyakova N, Lees JA, Hemann MT, White FM, Samson LD. Minor Changes in Expression of the Mismatch Repair Protein MSH2 Exert a Major Impact on Glioblastoma Response to Temozolomide. Cancer Research. PMID 26025730 DOI: 10.1158/0008-5472.Can-14-3616 |
0.695 |
|
| 2015 |
Kotapati S, Esades A, Matter B, Le C, Tretyakova N. High throughput HPLC-ESI(-)-MS/MS methodology for mercapturic acid metabolites of 1,3-butadiene: Biomarkers of exposure and bioactivation. Chemico-Biological Interactions. PMID 25727266 DOI: 10.1016/J.Cbi.2015.02.009 |
0.744 |
|
| 2015 |
Wickramaratne S, Boldry EJ, Buehler C, Wang YC, Distefano MD, Tretyakova NY. Error-prone translesion synthesis past DNA-peptide cross-links conjugated to the major groove of DNA via C5 of thymidine. The Journal of Biological Chemistry. 290: 775-87. PMID 25391658 DOI: 10.1074/Jbc.M114.613638 |
0.529 |
|
| 2015 |
Tretyakova NY, Groehler A, Ji S. DNA-Protein Cross-Links: Formation, Structural Identities, and Biological Outcomes Accounts of Chemical Research. 48: 1631-1644. DOI: 10.1021/acs.accounts.5b00056 |
0.324 |
|
| 2014 |
Park SL, Kotapati S, Wilkens LR, Tiirikainen M, Murphy SE, Tretyakova N, Le Marchand L. 1,3-Butadiene exposure and metabolism among Japanese American, Native Hawaiian, and White smokers. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 23: 2240-9. PMID 25368399 DOI: 10.1158/1055-9965.Epi-14-0492 |
0.673 |
|
| 2014 |
Kowal EA, Wickramaratne S, Kotapati S, Turo M, Tretyakova N, Stone MP. Major groove orientation of the (2S)-N(6)-(2-hydroxy-3-buten-1-yl)-2'-deoxyadenosine DNA adduct induced by 1,2-epoxy-3-butene. Chemical Research in Toxicology. 27: 1675-86. PMID 25238403 DOI: 10.1021/Tx500159W |
0.777 |
|
| 2014 |
Chappell G, Kobets T, O'Brien B, Tretyakova N, Sangaraju D, Kosyk O, Sexton KG, Bodnar W, Pogribny IP, Rusyn I. Epigenetic events determine tissue-specific toxicity of inhalational exposure to the genotoxic chemical 1,3-butadiene in male C57BL/6J mice. Toxicological Sciences : An Official Journal of the Society of Toxicology. 142: 375-84. PMID 25237060 DOI: 10.1093/Toxsci/Kfu191 |
0.75 |
|
| 2014 |
Yeo JE, Wickramaratne S, Khatwani S, Wang YC, Vervacke J, Distefano MD, Tretyakova NY. Synthesis of site-specific DNA-protein conjugates and their effects on DNA replication. Acs Chemical Biology. 9: 1860-8. PMID 24918113 DOI: 10.1021/Cb5001795 |
0.538 |
|
| 2014 |
Sangaraju D, Villalta PW, Wickramaratne S, Swenberg J, Tretyakova N. NanoLC/ESI+ HRMS3 quantitation of DNA adducts induced by 1,3-butadiene. Journal of the American Society For Mass Spectrometry. 25: 1124-35. PMID 24867429 DOI: 10.1007/S13361-014-0916-X |
0.828 |
|
| 2014 |
Kowal EA, Seneviratne U, Wickramaratne S, Doherty KE, Cao X, Tretyakova N, Stone MP. Structures of exocyclic R,R- and S,S-N(6),N(6)-(2,3-dihydroxybutan-1,4-diyl)-2'-deoxyadenosine adducts induced by 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 27: 805-17. PMID 24741991 DOI: 10.1021/Tx400472P |
0.762 |
|
| 2014 |
Ming X, Matter B, Song M, Veliath E, Shanley R, Jones R, Tretyakova N. Mapping structurally defined guanine oxidation products along DNA duplexes: influence of local sequence context and endogenous cytosine methylation. Journal of the American Chemical Society. 136: 4223-35. PMID 24571128 DOI: 10.1021/Ja411636J |
0.48 |
|
| 2014 |
Kotapati S, Sangaraju D, Esades A, Hallberg L, Walker VE, Swenberg JA, Tretyakova NY. Bis-butanediol-mercapturic acid (bis-BDMA) as a urinary biomarker of metabolic activation of butadiene to its ultimate carcinogenic species. Carcinogenesis. 35: 1371-8. PMID 24531806 DOI: 10.1093/Carcin/Bgu047 |
0.814 |
|
| 2014 |
Wickramaratne S, Tretyakova NY. Structure elucidation of DNA-protein crosslinks by using reductive desulfurization and liquid chromatography-tandem mass spectrometry. Chembiochem : a European Journal of Chemical Biology. 15: 353-5. PMID 24436288 DOI: 10.1002/Cbic.201300757 |
0.553 |
|
| 2014 |
Kowal E, Seneviratne U, Wickramaratne S, Doherty K, Cao X, Tretyakova N, Stone M. Structure of Exocyclic R,R N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Mhx/Pdb |
0.777 |
|
| 2014 |
Sangaraju D, Villalta PW, Wickramaratne S, Swenberg J, Tretyakova N. Erratum to: NanoLC/ESI+ HRMS3 Quantitation of DNA Adducts Induced by 1,3-Butadiene Journal of the American Society For Mass Spectrometry. 25: 1674-1674. DOI: 10.1007/S13361-014-0943-7 |
0.828 |
|
| 2013 |
Sangaraju D, Villalta P, Goggin M, Agunsoye MO, Campbell C, Tretyakova N. Capillary HPLC-accurate mass MS/MS quantitation of N7-(2,3,4-trihydroxybut-1-yl)-guanine adducts of 1,3-butadiene in human leukocyte DNA. Chemical Research in Toxicology. 26: 1486-97. PMID 23937706 DOI: 10.1021/Tx400213M |
0.86 |
|
| 2013 |
Wickramaratne S, Mukherjee S, Villalta PW, Schärer OD, Tretyakova NY. Synthesis of sequence-specific DNA-protein conjugates via a reductive amination strategy. Bioconjugate Chemistry. 24: 1496-506. PMID 23885807 DOI: 10.1021/Bc400018U |
0.539 |
|
| 2013 |
Kotandeniya D, Murphy D, Yan S, Park S, Seneviratne U, Koopmeiners JS, Pegg A, Kanugula S, Kassie F, Tretyakova N. Kinetics of O(6)-pyridyloxobutyl-2'-deoxyguanosine repair by human O(6)-alkylguanine DNA alkyltransferase. Biochemistry. 52: 4075-88. PMID 23683164 DOI: 10.1021/Bi4004952 |
0.802 |
|
| 2013 |
Tretyakova NY, Michaelson-Richie ED, Gherezghiher TB, Kurtz J, Ming X, Wickramaratne S, Campion M, Kanugula S, Pegg AE, Campbell C. DNA-reactive protein monoepoxides induce cell death and mutagenesis in mammalian cells. Biochemistry. 52: 3171-81. PMID 23566219 DOI: 10.1021/Bi400273M |
0.544 |
|
| 2013 |
Gherezghiher TB, Ming X, Villalta PW, Campbell C, Tretyakova NY. 1,2,3,4-Diepoxybutane-induced DNA-protein cross-linking in human fibrosarcoma (HT1080) cells. Journal of Proteome Research. 12: 2151-64. PMID 23506368 DOI: 10.1021/Pr3011974 |
0.574 |
|
| 2013 |
Tretyakova N, Villalta PW, Kotapati S. Mass spectrometry of structurally modified DNA. Chemical Reviews. 113: 2395-436. PMID 23441727 DOI: 10.1021/Cr300391R |
0.819 |
|
| 2013 |
Burns MB, Lackey L, Carpenter MA, Rathore A, Land AM, Leonard B, Refsland EW, Kotandeniya D, Tretyakova N, Nikas JB, Yee D, Temiz NA, Donohue DE, McDougle RM, Brown WL, et al. APOBEC3B is an enzymatic source of mutation in breast cancer. Nature. 494: 366-70. PMID 23389445 DOI: 10.1038/Nature11881 |
0.339 |
|
| 2013 |
Burns MB, Lackey L, Carpenter MA, Rathore A, Land AM, Leonard B, Refsland EW, Kotandeniya D, Tretyakova N, Nikas JB, Yee D, Temiz NA, Donohue DE, McDougle RM, Brown WL, et al. Correction: Corrigendum: APOBEC3B is an enzymatic source of mutation in breast cancer Nature. 502: 580-580. DOI: 10.1038/Nature12667 |
0.319 |
|
| 2012 |
Kotapati S, Maddukuri L, Wickramaratne S, Seneviratne U, Goggin M, Pence MG, Villalta P, Guengerich FP, Marnett L, Tretyakova N. Translesion synthesis across 1,N6-(2-hydroxy-3-hydroxymethylpropan-1,3-diyl)-2'-deoxyadenosine (1,N6-γ-HMHP-dA) adducts by human and archebacterial DNA polymerases. The Journal of Biological Chemistry. 287: 38800-11. PMID 22977231 DOI: 10.1074/Jbc.M112.396788 |
0.834 |
|
| 2012 |
Tretyakova N, Goggin M, Sangaraju D, Janis G. Quantitation of DNA adducts by stable isotope dilution mass spectrometry. Chemical Research in Toxicology. 25: 2007-35. PMID 22827593 DOI: 10.1021/Tx3002548 |
0.85 |
|
| 2012 |
Sangaraju D, Goggin M, Walker V, Swenberg J, Tretyakova N. NanoHPLC-nanoESI(+)-MS/MS quantitation of bis-N7-guanine DNA-DNA cross-links in tissues of B6C3F1 mice exposed to subppm levels of 1,3-butadiene. Analytical Chemistry. 84: 1732-9. PMID 22220765 DOI: 10.1021/Ac203079C |
0.855 |
|
| 2012 |
Johnson LA, Malayappan B, Tretyakova N, Campbell C, MacMillan ML, Wagner JE, Jacobson PA. Formation of cyclophosphamide specific DNA adducts in hematological diseases. Pediatric Blood & Cancer. 58: 708-14. PMID 21793181 DOI: 10.1002/Pbc.23254 |
0.512 |
|
| 2012 |
Kotapati S, Sangaraju D, Walker VE, Swenberg JA, Tretyakova NY. Abstract 4473: Urinary biomarkers of exposure to 1,3-Butadiene and its bioactivation to DNA-reactive metabolites Cancer Research. 72: 4473-4473. DOI: 10.1158/1538-7445.Am2012-4473 |
0.827 |
|
| 2011 |
Kotandeniya D, Murphy D, Seneviratne U, Guza R, Pegg A, Kanugula S, Tretyakova N. Mass spectrometry based approach to study the kinetics of O6-alkylguanine DNA alkyltransferase-mediated repair of O6-pyridyloxobutyl-2'-deoxyguanosine adducts in DNA. Chemical Research in Toxicology. 24: 1966-75. PMID 21913712 DOI: 10.1021/Tx2002993 |
0.827 |
|
| 2011 |
Kotapati S, Matter BA, Grant AL, Tretyakova NY. Quantitative analysis of trihydroxybutyl mercapturic acid, a urinary metabolite of 1,3-butadiene, in humans. Chemical Research in Toxicology. 24: 1516-26. PMID 21749114 DOI: 10.1021/Tx2001306 |
0.728 |
|
| 2011 |
Michaelson-Richie ED, Ming X, Codreanu SG, Loeber RL, Liebler DC, Campbell C, Tretyakova NY. Mechlorethamine-induced DNA-protein cross-linking in human fibrosarcoma (HT1080) cells. Journal of Proteome Research. 10: 2785-96. PMID 21486066 DOI: 10.1021/Pr200042U |
0.859 |
|
| 2011 |
Goggin M, Sangaraju D, Walker VE, Wickliffe J, Swenberg JA, Tretyakova N. Persistence and repair of bifunctional DNA adducts in tissues of laboratory animals exposed to 1,3-butadiene by inhalation. Chemical Research in Toxicology. 24: 809-17. PMID 21452897 DOI: 10.1021/Tx200009B |
0.842 |
|
| 2011 |
Guza R, Kotandeniya D, Murphy K, Dissanayake T, Lin C, Giambasu GM, Lad RR, Wojciechowski F, Amin S, Sturla SJ, Hudson RH, York DM, Jankowiak R, Jones R, Tretyakova NY. Influence of C-5 substituted cytosine and related nucleoside analogs on the formation of benzo[a]pyrene diol epoxide-dG adducts at CG base pairs of DNA. Nucleic Acids Research. 39: 3988-4006. PMID 21245046 DOI: 10.1093/Nar/Gkq1341 |
0.827 |
|
| 2011 |
Swenberg JA, Bordeerat NK, Boysen G, Carro S, Georgieva NI, Nakamura J, Troutman JM, Upton PB, Albertini RJ, Vacek PM, Walker VE, Sram RJ, Goggin M, Tretyakova N. 1,3-Butadiene: Biomarkers and application to risk assessment. Chemico-Biological Interactions. 192: 150-4. PMID 20974116 DOI: 10.1016/J.Cbi.2010.10.010 |
0.807 |
|
| 2011 |
Swenberg JA, Bordeerat NK, Boysen G, Carro S, Georgieva NI, Nakamura J, Troutman JM, Upton PB, Albertini RJ, Vacek PM, Walker VE, Sram RJ, Goggin M, Tretyakova N. Corrigendum to "1,3-Butadiene: Biomarkers and application to risk assessment" (Chemico-Biological Interactions (2011) 192, 1-2, (150-154) DOI: 10.1016/j.cbi.2010.10.010) Chemico-Biological Interactions. 193: 190. DOI: 10.1016/J.Cbi.2011.06.008 |
0.744 |
|
| 2010 |
Seneviratne U, Antsypovich S, Dorr DQ, Dissanayake T, Kotapati S, Tretyakova N. DNA oligomers containing site-specific and stereospecific exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, characterization, and effects on DNA structure. Chemical Research in Toxicology. 23: 1556-67. PMID 20873715 DOI: 10.1021/Tx100146V |
0.851 |
|
| 2010 |
Michaelson-Richie ED, Loeber RL, Codreanu SG, Ming X, Liebler DC, Campbell C, Tretyakova NY. DNA-protein cross-linking by 1,2,3,4-diepoxybutane. Journal of Proteome Research. 9: 4356-67. PMID 20666492 DOI: 10.1021/Pr1000835 |
0.842 |
|
| 2010 |
Malayappan B, Johnson L, Nie B, Panchal D, Matter B, Jacobson P, Tretyakova N. Quantitative high-performance liquid chromatography-electrospray ionization tandem mass spectrometry analysis of bis-N7-guanine DNA-DNA cross-links in white blood cells of cancer patients receiving cyclophosphamide therapy. Analytical Chemistry. 82: 3650-8. PMID 20361772 DOI: 10.1021/Ac902923S |
0.54 |
|
| 2010 |
Goggin M, Seneviratne U, Swenberg JA, Walker VE, Tretyakova N. Column switching HPLC-ESI(+)-MS/MS methods for quantitative analysis of exocyclic dA adducts in the DNA of laboratory animals exposed to 1,3-butadiene. Chemical Research in Toxicology. 23: 808-12. PMID 20229982 DOI: 10.1021/Tx900439W |
0.858 |
|
| 2010 |
Seneviratne U, Antsypovich S, Goggin M, Dorr DQ, Guza R, Moser A, Thompson C, York DM, Tretyakova N. Exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, structural elucidation, and mechanistic studies. Chemical Research in Toxicology. 23: 118-33. PMID 19883087 DOI: 10.1021/Tx900312E |
0.829 |
|
| 2010 |
Kotandeniya D, Guza R, Matter B, Lin C, Jankowiak R, Tretyakova N. Abstract 1697: A study on the reactivity of activated polycyclic aromatic hydrocarbons (PAH) with guanines base pared to C-5 substituted cytosines Cancer Research. 70: 1697-1697. DOI: 10.1158/1538-7445.Am10-1697 |
0.821 |
|
| 2010 |
Loeber RL, Michaelson-Richie ED, Codreanu SG, Liebler DC, Campbell CR, Tretyakova NY. Erratum: Proteomic analysis of DNA-protein cross-linking by antitumor nitrogen mustards (Chemical Research in Toxicology (2009) 22:6 (1151-1162)) Chemical Research in Toxicology. 23. DOI: 10.1021/Tx100220F |
0.824 |
|
| 2009 |
Moser A, Guza R, Tretyakova N, York DM. Density Functional Study of the Influence of C5 Cytosine Substitution in Base Pairs with Guanine. Theoretical Chemistry Accounts. 122: 179-188. PMID 19890472 DOI: 10.1007/S00214-008-0497-5 |
0.784 |
|
| 2009 |
Guza R, Ma L, Fang Q, Pegg AE, Tretyakova N. Cytosine methylation effects on the repair of O6-methylguanines within CG dinucleotides. The Journal of Biological Chemistry. 284: 22601-10. PMID 19531487 DOI: 10.1074/Jbc.M109.000919 |
0.813 |
|
| 2009 |
Loeber RL, Michaelson-Richie ED, Codreanu SG, Liebler DC, Campbell CR, Tretyakova NY. Proteomic analysis of DNA-protein cross-linking by antitumor nitrogen mustards. Chemical Research in Toxicology. 22: 1151-62. PMID 19480393 DOI: 10.1021/Tx900078Y |
0.851 |
|
| 2009 |
Goggin M, Swenberg JA, Walker VE, Tretyakova N. Molecular dosimetry of 1,2,3,4-diepoxybutane-induced DNA-DNA cross-links in B6C3F1 mice and F344 rats exposed to 1,3-butadiene by inhalation. Cancer Research. 69: 2479-86. PMID 19276346 DOI: 10.1158/0008-5472.Can-08-4152 |
0.832 |
|
| 2008 |
Tretyakova N, Guza R, Matter B. Endogenous cytosine methylation and the formation of carcinogen carcinogen-DNA adducts. Nucleic Acids Symposium Series (2004). 49-50. PMID 18776247 DOI: 10.1093/nass/nrn025 |
0.805 |
|
| 2008 |
Goggin M, Anderson C, Park S, Swenberg J, Walker V, Tretyakova N. Quantitative high-performance liquid chromatography-electrospray ionization-tandem mass spectrometry analysis of the adenine-guanine cross-links of 1,2,3,4-diepoxybutane in tissues of butadiene-exposed B6C3F1 mice. Chemical Research in Toxicology. 21: 1163-70. PMID 18442269 DOI: 10.1021/Tx800051Y |
0.847 |
|
| 2008 |
Loeber R, Michaelson E, Fang Q, Campbell C, Pegg AE, Tretyakova N. Cross-linking of the DNA repair protein Omicron6-alkylguanine DNA alkyltransferase to DNA in the presence of antitumor nitrogen mustards. Chemical Research in Toxicology. 21: 787-95. PMID 18324787 DOI: 10.1021/Tx7004508 |
0.863 |
|
| 2007 |
Matter B, Guza R, Zhao J, Li ZZ, Jones R, Tretyakova N. Sequence distribution of acetaldehyde-derived N2-ethyl-dG adducts along duplex DNA. Chemical Research in Toxicology. 20: 1379-87. PMID 17867647 DOI: 10.1021/Tx7001146 |
0.854 |
|
| 2007 |
Miksa B, Chinnappan R, Dang NC, Reppert M, Matter B, Tretyakova N, Grubor NM, Jankowiak R. Spectral differentiation and immunoaffinity capillary electrophoresis separation of enantiomeric benzo(a)pyrene diol epoxide-derived DNA adducts. Chemical Research in Toxicology. 20: 1192-9. PMID 17630708 DOI: 10.1021/Tx7001096 |
0.448 |
|
| 2007 |
Goggin M, Loeber R, Park S, Walker V, Wickliffe J, Tretyakova N. HPLC-ESI+-MS/MS analysis of N7-guanine-N7-guanine DNA cross-links in tissues of mice exposed to 1,3-butadiene. Chemical Research in Toxicology. 20: 839-47. PMID 17455958 DOI: 10.1021/Tx700020Q |
0.854 |
|
| 2007 |
Kim MY, Tretyakova N, Wogan GN. Mutagenesis of the supF gene by stereoisomers of 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 20: 790-7. PMID 17428069 DOI: 10.1021/Tx700003B |
0.307 |
|
| 2007 |
Antsypovich S, Quirk-Dorr D, Pitts C, Tretyakova N. Site specific N6-(2-hydroxy-3,4-epoxybut-1-yl)adenine oligodeoxynucleotide adducts of 1,2,3,4-diepoxybutane: synthesis and stability at physiological pH. Chemical Research in Toxicology. 20: 641-649. PMID 17355152 DOI: 10.1021/Tx060178K |
0.353 |
|
| 2007 |
Tretyakova N, Livshits A, Park S, Bisht B, Goggin M. Structural elucidation of a novel DNA-DNA cross-link of 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 20: 284-9. PMID 17305410 DOI: 10.1021/Tx060204E |
0.846 |
|
| 2007 |
Dorr DQ, Murphy K, Tretyakova N. Synthesis of DNA oligodeoxynucleotides containing structurally defined N6-(2-hydroxy-3-buten-1-yl)-adenine adducts of 3,4-epoxy-1-butene. Chemico-Biological Interactions. 166: 104-111. PMID 16765925 DOI: 10.1016/J.Cbi.2006.05.001 |
0.577 |
|
| 2006 |
Matter B, Malejka-Giganti D, Csallany AS, Tretyakova N. Quantitative analysis of the oxidative DNA lesion, 2,2-diamino-4-(2-deoxy-beta-D-erythro-pentofuranosyl)amino]-5(2H)-oxazolone (oxazolone), in vitro and in vivo by isotope dilution-capillary HPLC-ESI-MS/MS. Nucleic Acids Research. 34: 5449-60. PMID 17020926 DOI: 10.1093/Nar/Gkl596 |
0.508 |
|
| 2006 |
Loeber R, Rajesh M, Fang Q, Pegg AE, Tretyakova N. Cross-linking of the human DNA repair protein O6-alkylguanine DNA alkyltransferase to DNA in the presence of 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 19: 645-54. PMID 16696566 DOI: 10.1021/Tx0600088 |
0.858 |
|
| 2006 |
Guza R, Rajesh M, Fang Q, Pegg AE, Tretyakova N. Kinetics of O(6)-methyl-2'-deoxyguanosine repair by O(6)-alkylguanine DNA alkyltransferase within K-ras gene-derived DNA sequences. Chemical Research in Toxicology. 19: 531-8. PMID 16608164 DOI: 10.1021/Tx050348D |
0.821 |
|
| 2006 |
Millard JT, Hanly TC, Murphy K, Tretyakova N. The 5'-GNC site for DNA interstrand cross-linking is conserved for diepoxybutane stereoisomers. Chemical Research in Toxicology. 19: 16-9. PMID 16411651 DOI: 10.1021/Tx050250Z |
0.485 |
|
| 2005 |
Park S, Anderson C, Loeber R, Seetharaman M, Jones R, Tretyakova N. Interstrand and intrastrand DNA-DNA cross-linking by 1,2,3,4-diepoxybutane: role of stereochemistry. Journal of the American Chemical Society. 127: 14355-65. PMID 16218630 DOI: 10.1021/Ja051979X |
0.861 |
|
| 2005 |
Kim J, Park S, Tretyakova NY, Wagner CR. A method for quantitating the intracellular metabolism of AZT amino acid phosphoramidate pronucleotides by capillary high-performance liquid chromatography-electrospray ionization mass spectrometry. Molecular Pharmaceutics. 2: 233-41. PMID 15934784 DOI: 10.1021/Mp0500162 |
0.383 |
|
| 2005 |
Rajesh M, Wang G, Jones R, Tretyakova NY. Stable isotope labeling-mass spectrometry analysis of methyl- and pyridyloxobutyl-guanine adducts of 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone in p53-derived DNA sequences. Biochemistry. 44: 2197-2207. PMID 15697245 DOI: 10.1021/Bi0480032 |
0.384 |
|
| 2004 |
Park S, Hodge J, Anderson C, Tretyakova N. Guanine-adenine DNA cross-linking by 1,2,3,4-diepoxybutane: potential basis for biological activity. Chemical Research in Toxicology. 17: 1638-51. PMID 15606140 DOI: 10.1021/Tx0498206 |
0.617 |
|
| 2004 |
Thomson NM, Mijal RS, Ziegel R, Fleischer NL, Pegg AE, Tretyakova NY, Peterson LA. Development of a quantitative liquid chromatography/electrospray mass spectrometric assay for a mutagenic tobacco specific nitrosamine-derived DNA adduct, O6-[4-Oxo-4-(3-pyridyl)butyl]-2'-deoxyguanosine. Chemical Research in Toxicology. 17: 1600-6. PMID 15606135 DOI: 10.1021/Tx0498298 |
0.518 |
|
| 2004 |
Balcome S, Park S, Quirk Dorr DR, Hafner L, Phillips L, Tretyakova N. Adenine-containing DNA-DNA cross-links of antitumor nitrogen mustards. Chemical Research in Toxicology. 17: 950-62. PMID 15257621 DOI: 10.1021/Tx0499463 |
0.549 |
|
| 2004 |
Matter B, Wang G, Jones R, Tretyakova N. Formation of diastereomeric benzo[a]pyrene diol epoxide-guanine adducts in p53 gene-derived DNA sequences Chemical Research in Toxicology. 17: 731-741. PMID 15206894 DOI: 10.1021/Tx049974L |
0.441 |
|
| 2004 |
Park S, Tretyakova N. Structural characterization of the major DNA-DNA cross-link of 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 17: 129-36. PMID 14966999 DOI: 10.1021/Tx0342058 |
0.6 |
|
| 2004 |
Ziegel R, Shallop A, Upadhyaya P, Jones R, Tretyakova N. Endogenous 5-methylcytosine protects neighboring guanines from N7 and O6-methylation and O6-pyridyloxobutylation by the tobacco carcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone. Biochemistry. 43: 540-9. PMID 14717610 DOI: 10.1021/Bi035259J |
0.483 |
|
| 2003 |
Ziegel R, Shallop A, Jones R, Tretyakova NY. K-ras gene sequence effects on the formation of 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK)-DNA adducts. Chemical Research in Toxicology. 16: 541-550. PMID 12703972 DOI: 10.1021/Tx025619O |
0.509 |
|
| 2003 |
Park S, Seetharaman M, Ogdie A, Ferguson D, Tretyakova N. 3'-Exonuclease resistance of DNA oligodeoxynucleotides containing O6-[4-oxo-4-(3-pyridyl)butyl]guanine. Nucleic Acids Research. 31: 1984-94. PMID 12655016 DOI: 10.1093/Nar/Gkg299 |
0.497 |
|
| 2003 |
Upadhyaya P, Sturla SJ, Tretyakova N, Ziegel R, Villalta PW, Wang M, Hecht SS. Identification of adducts produced by the reaction of 4-(acetoxymethylnitrosamino)-1-(3-pyridyl)-1-butanol with deoxyguanosine and DNA. Chemical Research in Toxicology. 16: 180-90. PMID 12588189 DOI: 10.1021/Tx0256376 |
0.543 |
|
| 2002 |
Pfeifer GP, Denissenko MF, Olivier M, Tretyakova N, Hecht SS, Hainaut P. Tobacco smoke carcinogens, DNA damage and p53 mutations in smoking-associated cancers. Oncogene. 21: 7435-51. PMID 12379884 DOI: 10.1038/Sj.Onc.1205803 |
0.323 |
|
| 2002 |
Tretyakova N, Matter B, Jones R, Shallop A. Formation of benzo[a]pyrene diol epoxide-DNA adducts at specific guanines within K-ras and p53 gene sequences: stable isotope-labeling mass spectrometry approach. Biochemistry. 41: 9535-44. PMID 12135376 DOI: 10.1021/Bi025540I |
0.577 |
|
| 2001 |
Tretyakova N, Matter B, Ogdie A, Wishnok JS, Tannenbaum SR. Locating nucleobase lesions within DNA sequences by MALDI-TOF mass spectral analysis of exonuclease ladders. Chemical Research in Toxicology. 14: 1058-70. PMID 11511180 DOI: 10.1021/Tx010062I |
0.668 |
|
| 2000 |
Vatsadze SZ, Lebedev AT, Zyk NV, Zefirov NS, Tretyakova NY, Hass JR. Fragmentation of 3,7-dialkyl-1,5-diphenyl-3,7-diazabicyclo[3.3. 1]nonan-9-ones under electron ionization. Rapid Communications in Mass Spectrometry : Rcm. 14: 1949-53. PMID 11013425 DOI: 10.1002/1097-0231(20001030)14:20<1949::Aid-Rcm105>3.0.Co;2-1 |
0.312 |
|
| 2000 |
Tretyakova NY, Wishnok JS, Tannenbaum SR. Peroxynitrite-induced secondary oxidative lesions at guanine nucleobases: Chemical stability and recognition by the Fpg DNA repair enzyme Chemical Research in Toxicology. 13: 658-664. PMID 10898599 DOI: 10.1021/Tx000083X |
0.574 |
|
| 2000 |
Tretyakova NY, Burney S, Pamir B, Wishnok JS, Dedon PC, Wogan GN, Tannenbaum SR. Peroxynitrite-induced DNA damage in the supF gene: correlation with the mutational spectrum. Mutation Research. 447: 287-303. PMID 10751613 DOI: 10.1016/S0027-5107(99)00221-3 |
0.688 |
|
| 2000 |
Swenberg JA, Ham A, Koc H, Morinello E, Ranasinghe A, Tretyakova N, Upton PB, Wu K. DNA adducts: effects of low exposure to ethylene oxide, vinyl chloride and butadiene. Mutation Research. 464: 77-86. PMID 10633179 DOI: 10.1016/S1383-5718(99)00168-0 |
0.829 |
|
| 1999 |
Koc H, Tretyakova NY, Walker VE, Henderson RF, Swenberg JA. Molecular dosimetry of N-7 guanine adduct formation in mice and rats exposed to 1,3-butadiene. Chemical Research in Toxicology. 12: 566-74. PMID 10409395 DOI: 10.1021/Tx980265F |
0.65 |
|
| 1999 |
Tretyakova NY, Niles JC, Burney S, Wishnok JS, Tannenbaum SR. Peroxynitrite-induced reactions of synthetic oligonucleotides containing 8-Oxoguanine Chemical Research in Toxicology. 12: 459-466. PMID 10328757 DOI: 10.1021/Tx980235C |
0.619 |
|
| 1997 |
Tretyakova N, Sangaiah R, Yen TY, Gold A, Swenberg JA. Adenine adducts with diepoxybutane: isolation and analysis in exposed calf thymus DNA. Chemical Research in Toxicology. 10: 1171-9. PMID 9348440 DOI: 10.1021/Tx9700681 |
0.682 |
|
| 1997 |
Tretyakova N, Lin Y, Sangaiah R, Upton PB, Swenberg JA. Identification and quantitation of DNA adducts from calf thymus DNA exposed to 3,4-epoxy-1-butene. Carcinogenesis. 18: 137-47. PMID 9054600 DOI: 10.1093/Carcin/18.1.137 |
0.668 |
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