| Year |
Citation |
Score |
| 2023 |
Smerdon MJ, Wyrick JJ, Delaney S. A HALF CENTURY OF EXPLORING DNA EXCISION REPAIR IN CHROMATIN. The Journal of Biological Chemistry. 105118. PMID 37527775 DOI: 10.1016/j.jbc.2023.105118 |
0.612 |
|
| 2021 |
Li Y, Mao P, Basenko EY, Lewis Z, Smerdon MJ, Czaja W. Versatile cell-based assay for measuring DNA alkylation damage and its repair. Scientific Reports. 11: 18393. PMID 34526526 DOI: 10.1038/s41598-021-97523-w |
0.537 |
|
| 2021 |
Bohm KA, Hodges AJ, Czaja W, Selvam K, Smerdon MJ, Mao P, Wyrick JJ. Distinct roles for RSC and SWI/SNF chromatin remodelers in genomic excision repair. Genome Research. PMID 34001524 DOI: 10.1101/gr.274373.120 |
0.608 |
|
| 2019 |
Mao P, Smerdon MJ, Roberts SA, Wyrick JJ. Asymmetric repair of UV damage in nucleosomes imposes a DNA strand polarity on somatic mutations in skin cancer. Genome Research. PMID 31871068 DOI: 10.1101/Gr.253146.119 |
0.664 |
|
| 2019 |
Meas R, Wyrick JJ, Smerdon MJ. Nucleosomes Regulate Base Excision Repair in Chromatin. Mutation Research. 780: 29-36. PMID 31388331 DOI: 10.1016/J.Mrrev.2017.10.002 |
0.657 |
|
| 2019 |
Paillé A, Charton R, Muguet A, Griesenbeck J, Smerdon MJ, Conconi A. Analyses of rRNA gene chromatin in cell cycle arrested cells. Data in Brief. 25: 104083. PMID 31294051 DOI: 10.1016/J.Dib.2019.104083 |
0.444 |
|
| 2019 |
Charton R, Muguet A, Griesenbeck J, Smerdon MJ, Conconi A. In yeast cells arrested at the early S-phase by hydroxyurea, rRNA gene promoters and chromatin are poised for transcription while rRNA synthesis is compromised. Mutation Research. 815: 20-29. PMID 31063901 DOI: 10.1016/J.Mrfmmm.2019.04.003 |
0.46 |
|
| 2018 |
Brown AJ, Mao P, Smerdon MJ, Wyrick JJ, Roberts SA. Nucleosome positions establish an extended mutation signature in melanoma. Plos Genetics. 14: e1007823. PMID 30485262 DOI: 10.1371/Journal.Pgen.1007823 |
0.471 |
|
| 2018 |
Mao P, Brown AJ, Esaki S, Lockwood S, Poon GMK, Smerdon MJ, Roberts SA, Wyrick JJ. ETS transcription factors induce a unique UV damage signature that drives recurrent mutagenesis in melanoma. Nature Communications. 9: 2626. PMID 29980679 DOI: 10.1038/S41467-018-05064-0 |
0.481 |
|
| 2018 |
Rodriguez Y, Duan M, Wyrick JJ, Smerdon MJ. A cassette of basic amino acids in histone H2B regulates nucleosome dynamics and access to DNA damage. The Journal of Biological Chemistry. PMID 29588367 DOI: 10.1074/Jbc.Ra117.000358 |
0.639 |
|
| 2017 |
Mao P, Brown AJ, Malc EP, Mieczkowski PA, Smerdon MJ, Roberts SA, Wyrick JJ. Genome-wide maps of alkylation damage, repair, and mutagenesis in yeast reveal mechanisms of mutational heterogeneity. Genome Research. PMID 28912372 DOI: 10.1101/Gr.225771.117 |
0.562 |
|
| 2016 |
Mao P, Wyrick JJ, Roberts SA, Smerdon MJ. UV-Induced DNA Damage and Mutagenesis in Chromatin. Photochemistry and Photobiology. PMID 27716995 DOI: 10.1111/Php.12646 |
0.652 |
|
| 2016 |
Mao P, Smerdon MJ, Roberts SA, Wyrick JJ. Chromosomal landscape of UV damage formation and repair at single-nucleotide resolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 27457959 DOI: 10.1073/Pnas.1606667113 |
0.606 |
|
| 2016 |
Meas R, Smerdon MJ. Nucleosomes determine their own patch size in base excision repair. Scientific Reports. 6: 27122. PMID 27265863 DOI: 10.1038/Srep27122 |
0.641 |
|
| 2016 |
Rodriguez Y, Hinz JM, Laughery MF, Wyrick JJ, Smerdon MJ. Site-specific Acetylation of Histone H3 Decreases Polymerase β Activity on Nucleosome Core Particles in vitro. The Journal of Biological Chemistry. PMID 27033702 DOI: 10.1074/Jbc.M116.725788 |
0.637 |
|
| 2015 |
Rodriguez Y, Hinz JM, Smerdon MJ. Accessing DNA damage in chromatin: Preparing the chromatin landscape for base excision repair. Dna Repair. 32: 113-9. PMID 25957487 DOI: 10.1016/J.Dnarep.2015.04.021 |
0.659 |
|
| 2015 |
Meas R, Smerdon MJ, Wyrick JJ. The amino-terminal tails of histones H2A and H3 coordinate efficient base excision repair, DNA damage signaling and postreplication repair in Saccharomyces cerevisiae. Nucleic Acids Research. 43: 4990-5001. PMID 25897129 DOI: 10.1093/Nar/Gkv372 |
0.595 |
|
| 2014 |
Mao P, Smerdon MJ. Rescue of DNA damage-stalled RNA Pol II: histone H2B in action. Rna & Disease (Houston, Tex.). 1. PMID 25705722 DOI: 10.14800/Rd.422; |
0.431 |
|
| 2014 |
Mao P, Meas R, Dorgan KM, Smerdon MJ. UV damage-induced RNA polymerase II stalling stimulates H2B deubiquitylation. Proceedings of the National Academy of Sciences of the United States of America. 111: 12811-6. PMID 25136098 DOI: 10.1073/Pnas.1403901111 |
0.565 |
|
| 2014 |
Czaja W, Mao P, Smerdon MJ. Chromatin remodelling complex RSC promotes base excision repair in chromatin of Saccharomyces cerevisiae. Dna Repair. 16: 35-43. PMID 24674626 DOI: 10.1016/J.Dnarep.2014.01.002 |
0.633 |
|
| 2014 |
Duan MR, Smerdon MJ. Histone H3 lysine 14 (H3K14) acetylation facilitates DNA repair in a positioned nucleosome by stabilizing the binding of the chromatin Remodeler RSC (Remodels Structure of Chromatin). The Journal of Biological Chemistry. 289: 8353-63. PMID 24515106 DOI: 10.1074/Jbc.M113.540732 |
0.569 |
|
| 2014 |
Zavala AG, Morris RT, Wyrick JJ, Smerdon MJ. High-resolution characterization of CPD hotspot formation in human fibroblasts. Nucleic Acids Research. 42: 893-905. PMID 24137003 DOI: 10.1093/Nar/Gkt912 |
0.605 |
|
| 2013 |
Ghosh-Roy S, Das D, Chowdhury D, Smerdon MJ, J Smerdon M, Chaudhuri RN. Rad26, the transcription-coupled repair factor in yeast, is required for removal of stalled RNA polymerase-II following UV irradiation. Plos One. 8: e72090. PMID 23991048 DOI: 10.1371/Journal.Pone.0072090 |
0.588 |
|
| 2013 |
Rodriguez Y, Smerdon MJ. The structural location of DNA lesions in nucleosome core particles determines accessibility by base excision repair enzymes. The Journal of Biological Chemistry. 288: 13863-75. PMID 23543741 DOI: 10.1074/Jbc.M112.441444 |
0.567 |
|
| 2012 |
Czaja W, Mao P, Smerdon MJ. The emerging roles of ATP-dependent chromatin remodeling enzymes in nucleotide excision repair. International Journal of Molecular Sciences. 13: 11954-73. PMID 23109894 DOI: 10.3390/Ijms130911954 |
0.676 |
|
| 2012 |
Shim Y, Duan MR, Chen X, Smerdon MJ, Min JH. Polycistronic coexpression and nondenaturing purification of histone octamers. Analytical Biochemistry. 427: 190-2. PMID 22617796 DOI: 10.1016/J.Ab.2012.05.006 |
0.376 |
|
| 2012 |
Nag R, Gong F, Fahy D, Smerdon MJ. Erratum: A single amino acid change in histone H4 enhances UV survival and DNA repair in yeast (Nucleic Acids Research (2008) 36 (3857-3866) DOI:10.1093/nar/gkn311) Nucleic Acids Research. 40. DOI: 10.1093/Nar/Gks924 |
0.474 |
|
| 2010 |
Mao P, Smerdon MJ. Yeast deubiquitinase Ubp3 interacts with the 26 S proteasome to facilitate Rad4 degradation. The Journal of Biological Chemistry. 285: 37542-50. PMID 20876584 DOI: 10.1074/Jbc.M110.170175 |
0.566 |
|
| 2010 |
Czaja W, Bespalov VA, Hinz JM, Smerdon MJ. Proficient repair in chromatin remodeling defective ino80 mutants of Saccharomyces cerevisiae highlights replication defects as the main contributor to DNA damage sensitivity. Dna Repair. 9: 976-84. PMID 20674516 DOI: 10.1016/J.Dnarep.2010.06.010 |
0.65 |
|
| 2010 |
Hinz AK, Wang Y, Smerdon MJ. Base excision repair in a glucocorticoid response element: effect of glucocorticoid receptor binding. The Journal of Biological Chemistry. 285: 28683-90. PMID 20628060 DOI: 10.1074/Jbc.M110.113530 |
0.595 |
|
| 2010 |
Duan MR, Smerdon MJ. UV damage in DNA promotes nucleosome unwrapping. The Journal of Biological Chemistry. 285: 26295-303. PMID 20562439 DOI: 10.1074/Jbc.M110.140087 |
0.657 |
|
| 2010 |
Hinz JM, Rodriguez Y, Smerdon MJ. Rotational dynamics of DNA on the nucleosome surface markedly impact accessibility to a DNA repair enzyme. Proceedings of the National Academy of Sciences of the United States of America. 107: 4646-51. PMID 20176960 DOI: 10.1073/Pnas.0914443107 |
0.639 |
|
| 2010 |
Nag R, Kyriss M, Smerdon JW, Wyrick JJ, Smerdon MJ. A cassette of N-terminal amino acids of histone H2B are required for efficient cell survival, DNA repair and Swi/Snf binding in UV irradiated yeast. Nucleic Acids Research. 38: 1450-60. PMID 20007597 DOI: 10.1093/Nar/Gkp1074 |
0.545 |
|
| 2010 |
Svedružić ZM, Wang C, Kosmoski JV, Smerdon MJ. Accommodation and repair of a UV photoproduct in DNA at different rotational settings on the nucleosome surface (Journal of Biological Chemistry (2005) 280, (40051-40057)) Journal of Biological Chemistry. 285: 39574. DOI: 10.1074/jbc.A109.509478 |
0.468 |
|
| 2009 |
Zhang L, Jones K, Smerdon MJ, Gong F. Assays for chromatin remodeling during nucleotide excision repair in Saccharomyces cerevisiae. Methods (San Diego, Calif.). 48: 19-22. PMID 19336254 DOI: 10.1016/J.Ymeth.2009.03.017 |
0.64 |
|
| 2009 |
Nag R, Smerdon MJ. Altering the chromatin landscape for nucleotide excision repair. Mutation Research. 682: 13-20. PMID 19167517 DOI: 10.1016/J.Mrrev.2009.01.002 |
0.664 |
|
| 2009 |
Chaudhuri S, Wyrick JJ, Smerdon MJ. Histone H3 Lys79 methylation is required for efficient nucleotide excision repair in a silenced locus of Saccharomyces cerevisiae. Nucleic Acids Research. 37: 1690-700. PMID 19155276 DOI: 10.1093/Nar/Gkp003 |
0.571 |
|
| 2008 |
Nag R, Gong F, Fahy D, Smerdon MJ. A single amino acid change in histone H4 enhances UV survival and DNA repair in yeast. Nucleic Acids Research. 36: 3857-66. PMID 18508805 DOI: 10.1093/Nar/Gkn311 |
0.554 |
|
| 2008 |
Gong F, Fahy D, Liu H, Wang W, Smerdon MJ. Role of the mammalian SWI/SNF chromatin remodeling complex in the cellular response to UV damage. Cell Cycle (Georgetown, Tex.). 7: 1067-74. PMID 18414052 DOI: 10.4161/Cc.7.8.5647 |
0.528 |
|
| 2007 |
Adair JE, Maloney SC, Dement GA, Wertzler KJ, Smerdon MJ, Reeves R. High-mobility group A1 proteins inhibit expression of nucleotide excision repair factor xeroderma pigmentosum group A. Cancer Research. 67: 6044-52. PMID 17616660 DOI: 10.1158/0008-5472.Can-06-1689 |
0.392 |
|
| 2007 |
Li S, Ding B, LeJeune D, Ruggiero C, Chen X, Smerdon MJ. The roles of Rad16 and Rad26 in repairing repressed and actively transcribed genes in yeast. Dna Repair. 6: 1596-606. PMID 17611170 DOI: 10.1016/J.Dnarep.2007.05.005 |
0.54 |
|
| 2007 |
Nakanishi S, Prasad R, Wilson SH, Smerdon M. Different structural states in oligonucleosomes are required for early versus late steps of base excision repair. Nucleic Acids Research. 35: 4313-21. PMID 17576692 DOI: 10.1093/Nar/Gkm436 |
0.727 |
|
| 2007 |
Maloney SC, Adair JE, Smerdon MJ, Reeves R. Gene-specific nucleotide excision repair is impaired in human cells expressing elevated levels of high mobility group A1 nonhistone proteins. Dna Repair. 6: 1371-9. PMID 17540622 DOI: 10.1016/J.Dnarep.2007.04.003 |
0.449 |
|
| 2006 |
Li S, Chen X, Ruggiero C, Ding B, Smerdon MJ. Modulation of Rad26- and Rpb9-mediated DNA repair by different promoter elements. The Journal of Biological Chemistry. 281: 36643-51. PMID 17023424 DOI: 10.1074/Jbc.M604885200 |
0.536 |
|
| 2006 |
Gong F, Fahy D, Smerdon MJ. Rad4-Rad23 interaction with SWI/SNF links ATP-dependent chromatin remodeling with nucleotide excision repair. Nature Structural & Molecular Biology. 13: 902-7. PMID 17013386 DOI: 10.1038/Nsmb1152 |
0.64 |
|
| 2005 |
Conconi A, Paquette M, Fahy D, Bespalov VA, Smerdon MJ. Repair-independent chromatin assembly onto active ribosomal genes in yeast after UV irradiation. Molecular and Cellular Biology. 25: 9773-83. PMID 16260595 DOI: 10.1128/Mcb.25.22.9773-9783.2005 |
0.616 |
|
| 2005 |
Svedruzić ZM, Wang C, Kosmoski JV, Smerdon MJ. Accommodation and repair of a UV photoproduct in DNA at different rotational settings on the nucleosome surface. The Journal of Biological Chemistry. 280: 40051-7. PMID 16210312 DOI: 10.1074/Jbc.A109.509478 |
0.59 |
|
| 2005 |
Adair JE, Kwon Y, Dement GA, Smerdon MJ, Reeves R. Inhibition of nucleotide excision repair by high mobility group protein HMGA1. The Journal of Biological Chemistry. 280: 32184-92. PMID 16033759 DOI: 10.1074/Jbc.M505600200 |
0.726 |
|
| 2005 |
Gong F, Kwon Y, Smerdon MJ. Nucleotide excision repair in chromatin and the right of entry. Dna Repair. 4: 884-96. PMID 15961354 DOI: 10.1016/J.Dnarep.2005.04.007 |
0.768 |
|
| 2005 |
Kwon Y, Smerdon MJ. DNA repair in a protein-DNA complex: searching for the key to get in. Mutation Research. 577: 118-30. PMID 15913668 DOI: 10.1016/J.Mrfmmm.2005.02.013 |
0.731 |
|
| 2005 |
Fahy D, Conconi A, Smerdon MJ. Rapid changes in transcription and chromatin structure of ribosomal genes in yeast during growth phase transitions. Experimental Cell Research. 305: 365-73. PMID 15817161 DOI: 10.1016/J.Yexcr.2005.01.016 |
0.34 |
|
| 2005 |
Beard BC, Stevenson JJ, Wilson SH, Smerdon MJ. Base excision repair in nucleosomes lacking histone tails. Dna Repair. 4: 203-9. PMID 15590328 DOI: 10.1016/J.Dnarep.2004.09.011 |
0.73 |
|
| 2004 |
Beard BC, Smerdon MJ. Analysis of DNA repair on nucleosome templates. Methods in Enzymology. 377: 499-507. PMID 14979047 DOI: 10.1016/S0076-6879(03)77032-3 |
0.764 |
|
| 2004 |
Li S, Smerdon MJ. Dissecting transcription-coupled and global genomic repair in the chromatin of yeast GAL1-10 genes. The Journal of Biological Chemistry. 279: 14418-26. PMID 14734564 DOI: 10.1074/Jbc.M312004200 |
0.542 |
|
| 2003 |
Kwon Y, Smerdon MJ. Binding of zinc finger protein transcription factor IIIA to its cognate DNA sequence with single UV photoproducts at specific sites and its effect on DNA repair. The Journal of Biological Chemistry. 278: 45451-9. PMID 12963720 DOI: 10.1074/Jbc.M308645200 |
0.706 |
|
| 2003 |
Beard BC, Wilson SH, Smerdon MJ. Suppressed catalytic activity of base excision repair enzymes on rotationally positioned uracil in nucleosomes. Proceedings of the National Academy of Sciences of the United States of America. 100: 7465-70. PMID 12799467 DOI: 10.1073/Pnas.1330328100 |
0.751 |
|
| 2002 |
Li S, Smerdon MJ. Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae. The Embo Journal. 21: 5921-9. PMID 12411509 DOI: 10.1093/Emboj/Cdf589 |
0.415 |
|
| 2002 |
Li S, Smerdon MJ. Nucleosome structure and repair of N-methylpurines in the GAL1-10 genes of Saccharomyces cerevisiae. The Journal of Biological Chemistry. 277: 44651-9. PMID 12244104 DOI: 10.1074/Jbc.M206623200 |
0.588 |
|
| 2002 |
Conconi A, Bespalov VA, Smerdon MJ. Transcription-coupled repair in RNA polymerase I-transcribed genes of yeast. Proceedings of the National Academy of Sciences of the United States of America. 99: 649-54. PMID 11782531 DOI: 10.1073/Pnas.022373099 |
0.488 |
|
| 2001 |
Bespalov VA, Conconi A, Zhang X, Fahy D, Smerdon MJ. Improved method for measuring the ensemble average of strand breaks in genomic DNA. Environmental and Molecular Mutagenesis. 38: 166-74. PMID 11746751 DOI: 10.1002/Em.1068 |
0.519 |
|
| 2001 |
Bespalov VA, Conconi A, Zhang X, Fahy D, Smerdon MJ. At the birth of molecular radiation biology Environmental and Molecular Mutagenesis. 38: 135-143. PMID 11746747 DOI: 10.1002/em.1064 |
0.508 |
|
| 2001 |
Kosmoski JV, Ackerman EJ, Smerdon MJ. DNA repair of a single UV photoproduct in a designed nucleosome. Proceedings of the National Academy of Sciences of the United States of America. 98: 10113-8. PMID 11517308 DOI: 10.1073/Pnas.181073398 |
0.679 |
|
| 2000 |
Li S, Waters R, Smerdon MJ. Low- and high-resolution mapping of DNA damage at specific sites Methods. 22: 170-179. PMID 11020332 DOI: 10.1006/Meth.2000.1058 |
0.622 |
|
| 2000 |
Liu X, Smerdon MJ. Nucleotide excision repair of the 5 S ribosomal RNA gene assembled into a nucleosome Journal of Biological Chemistry. 275: 23729-23735. PMID 10821833 DOI: 10.1074/Jbc.M002206200 |
0.594 |
|
| 2000 |
Brooks PJ, Wise DS, Berry DA, Kosmoski JV, Smerdon MJ, Somers RL, Mackie H, Spoonde AY, Ackerman EJ, Coleman K, Tarone RE, Robbins JH. The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells. The Journal of Biological Chemistry. 275: 22355-62. PMID 10801836 DOI: 10.1074/Jbc.M002259200 |
0.567 |
|
| 2000 |
Conconi A, Jager-Vottero P, Zhang X, Beard BC, Smerdon MJ. Mitotic viability and metabolic competence in UV-irradiated yeast cells. Mutation Research. 459: 55-64. PMID 10677683 DOI: 10.1016/S0921-8777(99)00057-9 |
0.665 |
|
| 2000 |
Liu X, Mann DB, Suquet C, Springer DL, Smerdon MJ. Ultraviolet damage and nucleosome folding of the 5S ribosomal RNA gene Biochemistry. 39: 557-566. PMID 10642180 DOI: 10.1021/Bi991771M |
0.526 |
|
| 1999 |
Meijer M, Smerdon MJ. Accessing DNA damage in chromatin: Insights from transcription Bioessays. 21: 596-603. PMID 10472186 DOI: 10.1002/(Sici)1521-1878(199907)21:7<596::Aid-Bies8>3.0.Co;2-5 |
0.651 |
|
| 1999 |
Li S, Livingstone-Zatchej M, Gupta R, Meijer M, Thoma F, Smerdon MJ. Nucleotide excision repair in a constitutive and inducible gene of a yeast minichromosome in intact cells Nucleic Acids Research. 27: 3610-3620. PMID 10446254 DOI: 10.1093/Nar/27.17.3610 |
0.524 |
|
| 1999 |
Kosmoski JV, Smerdon MJ. Synthesis and nucleosome structure of DNA containing a UV photoproduct at a specific site Biochemistry. 38: 9485-9494. PMID 10413526 DOI: 10.1021/Bi990297H |
0.604 |
|
| 1999 |
Li S, Smerdon MJ. Base excision repair of N-methylpurines in a yeast minichromosome: Effects of transcription, DNA sequence, and nucleosome positioning Journal of Biological Chemistry. 274: 12201-12204. PMID 10212183 DOI: 10.1074/Jbc.274.18.12201 |
0.575 |
|
| 1999 |
Conconi A, Liu X, Koriazova L, Ackerman EJ, Smerdon MJ. Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene. The Embo Journal. 18: 1387-96. PMID 10064604 DOI: 10.1093/Emboj/18.5.1387 |
0.553 |
|
| 1999 |
Smerdon MJ, Conconi A. Modulation of DNA damage and DNA repair in chromatin Progress in Nucleic Acid Research and Molecular Biology. 62: 227-255. PMID 9932456 DOI: 10.1016/S0079-6603(08)60509-7 |
0.673 |
|
| 1998 |
Baxter BK, Smerdon MJ. Nucleosome unfolding during DNA repair in normal and xeroderma pigmentosum (group C) human cells. The Journal of Biological Chemistry. 273: 17517-24. PMID 9651343 DOI: 10.1074/Jbc.273.28.17517 |
0.577 |
|
| 1997 |
Liu X, Conconi A, Smerdon MJ. Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation Biochemistry. 36: 13710-13717. PMID 9354642 DOI: 10.1021/Bi9716736 |
0.382 |
|
| 1997 |
Mann DB, Springer DL, Smerdon MJ. DNA damage can alter the stability of nucleosomes: Effects are dependent on damage type Proceedings of the National Academy of Sciences of the United States of America. 94: 2215-2220. PMID 9122174 DOI: 10.1073/Pnas.94.6.2215 |
0.638 |
|
| 1996 |
Lehmann AR, Bridges BA, Hanawalt PC, Johnson RT, Kanaar R, Krokan HE, Kyrtopoulos S, Lambert B, Melton DW, Moustacchi E, Natarajan AT, Radman M, Sarasin A, Seeberg E, Smerdon MJ, et al. Workshop on processing of DNA damage. Mutation Research. 364: 245-70. PMID 8960136 DOI: 10.1016/S0921-8777(96)00037-7 |
0.566 |
|
| 1996 |
Conconi A, Smerdon MJ, Howe GA, Ryan CA. The octadecanoid signalling pathway in plants mediates a response to ultraviolet radiation Nature. 383: 826-829. PMID 8893008 DOI: 10.1038/383826A0 |
0.314 |
|
| 1996 |
Fritz LK, Suquet C, Smerdon MJ. Strand breaks are repaired efficiently in human ribosomal genes Journal of Biological Chemistry. 271: 12972-12976. PMID 8662972 DOI: 10.1074/Jbc.271.22.12972 |
0.603 |
|
| 1996 |
Mueller JP, Smerdon MJ. Rad23 is required for transcription-coupled repair and efficient overall repair in Saccharomyces cerevisiae Molecular and Cellular Biology. 16: 2361-2368. PMID 8628303 DOI: 10.1128/Mcb.16.5.2361 |
0.582 |
|
| 1995 |
Murad AO, de Cock J, Brown D, Smerdon MJ. Variations in transcription-repair coupling in mouse cells. The Journal of Biological Chemistry. 270: 3949-57. PMID 7876142 DOI: 10.1074/Jbc.270.8.3949 |
0.52 |
|
| 1995 |
Suquet C, Mitchell DL, Smerdon MJ. Repair of UV-induced (6-4) photoproducts in nucleosome core DNA Journal of Biological Chemistry. 270: 16507-16509. PMID 7622452 DOI: 10.1074/Jbc.270.28.16507 |
0.486 |
|
| 1995 |
Mueller JP, Smerdon MJ. Repair of plasmid and genomic DNA in a rad7δ mutant of yeast Nucleic Acids Research. 23: 3457-3464. PMID 7567456 DOI: 10.1093/Nar/23.17.3457 |
0.577 |
|
| 1995 |
Fritz LK, Smerdon MJ. Repair of UV damage in actively transcribed ribosomal genes Biochemistry. 34: 13117-13124. PMID 7548072 DOI: 10.1021/Bi00040A024 |
0.606 |
|
| 1995 |
Liu XQ, Smerdon MJ. A Slot Blot Method for Detection of Ultraviolet Photoproducts in DNA Analytical Biochemistry. 229: 323-328. PMID 7485990 DOI: 10.1006/Abio.1995.1420 |
0.567 |
|
| 1994 |
Thrall BD, Mann DB, Smerdon MJ, Springer DL. Nucleosome structure modulates benzo[a]pyrenediol epoxide adduct formation. Biochemistry. 33: 2210-6. PMID 8117678 DOI: 10.1021/Bi00174A030 |
0.596 |
|
| 1994 |
Brown DW, Libertini LJ, Suquet C, Small EW, Smerdon MJ. Effects of nucleosome unfolding on the distribution of UV damage in DNA Annals of the New York Academy of Sciences. 726: 292-294. PMID 8092685 DOI: 10.1111/J.1749-6632.1994.Tb52830.X |
0.421 |
|
| 1993 |
Brown DW, Libertini LJ, Suquet C, Small EW, Smerdon MJ. Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA Biochemistry. 32: 10527-10531. PMID 8399198 DOI: 10.1021/Bi00091A001 |
0.532 |
|
| 1993 |
Suquet C, Smerdon MJ. UV damage to DNA strongly influences its rotational setting on the histone surface of reconstituted nucleosomes Journal of Biological Chemistry. 268: 23755-23757. PMID 8226904 |
0.553 |
|
| 1992 |
Bedoyan J, Gupta R, Thoma F, Smerdon MJ. Transcription, nucleosome stability, and DNA repair in a yeast minichromosome Journal of Biological Chemistry. 267: 5996-6004. PMID 1556111 |
0.409 |
|
| 1992 |
Huijzer JC, Smerdon MJ. Characterization of biotinylated repair regions in reversibly permeabilized human fibroblasts Biochemistry. 31: 5077-5084. PMID 1472261 DOI: 10.1021/Bi00136A021 |
0.6 |
|
| 1992 |
Sidik K, Smerdon MJ. Correlation between repair patch ligation and nucleosome rearrangement in human cells treated with bleomycin, uv radiation or methyl methanesulfonate Carcinogenesis. 13: 135-138. PMID 1370767 DOI: 10.1093/Carcin/13.1.135 |
0.48 |
|
| 1992 |
Thrall BD, Mann DB, Smerdon MJ, Springer DL. DNA polymerase, RNA polymerase and exonuclease activities on a DNA sequence modified by benzo[α]pyrene diolepoxide Carcinogenesis. 13: 1529-1534. PMID 1327570 DOI: 10.1093/Carcin/13.9.1529 |
0.545 |
|
| 1991 |
Smerdon MJ. DNA repair and the role of chromatin structure Current Opinion in Cell Biology. 3: 422-428. PMID 1892653 DOI: 10.1016/0955-0674(91)90069-B |
0.627 |
|
| 1990 |
Jensen KA, Smerdon MJ. DNA repair within nucleosome cores of UV-irradiated human cells. Biochemistry. 29: 4773-82. PMID 2364058 DOI: 10.1021/Bi00472A005 |
0.567 |
|
| 1990 |
Smerdon MJ, Thoma F. Site-specific DNA repair at the nucleosome level in a yeast minichromosome Cell. 61: 675-684. PMID 2188732 DOI: 10.1016/0092-8674(90)90479-X |
0.473 |
|
| 1990 |
Smerdon MJ, Bedoyan J, Thoma F. DNA repair in a small yeast plasmid folded into chromatin Nucleic Acids Research. 18: 2045-2051. PMID 2186374 DOI: 10.1093/Nar/18.8.2045 |
0.579 |
|
| 1990 |
Gale JM, Smerdon MJ. UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes Photochemistry and Photobiology. 51: 411-417. PMID 2160660 DOI: 10.1111/J.1751-1097.1990.Tb01732.X |
0.551 |
|
| 1990 |
Sidik K, Smerdon MJ. Nucleosome rearrangement in human cells following short patch repair of DNA damaged by bleomycin. Biochemistry. 29: 7501-11. PMID 1699600 DOI: 10.1021/Bi00484A020 |
0.589 |
|
| 1990 |
Sidik K, Smerdon MJ. Bleomycin-induced DNA Damage and Repair in Human Cells Permeabilized with Lysophosphatidylcholine Cancer Research. 50: 1613-1619. PMID 1689213 |
0.552 |
|
| 1989 |
Ramanathan B, Smerdon MJ. Enhanced DNA repair synthesis in hyperacetylated nucleosomes. The Journal of Biological Chemistry. 264: 11026-34. PMID 2738057 |
0.542 |
|
| 1988 |
Lorenz JD, Watkins JF, Smerdon MJ. Excision repair of UV damage in human fibroblasts reversibly permeabilized by lysolecithin Mutation Research Dna Repair Reports. 193: 167-179. PMID 3347208 DOI: 10.1016/0167-8817(88)90047-8 |
0.534 |
|
| 1988 |
Gale JM, Smerdon MJ. Photofootprint of nucleosome core DNA in intact chromatin having different structural states Journal of Molecular Biology. 204: 949-958. PMID 3221402 DOI: 10.1016/0022-2836(88)90054-X |
0.547 |
|
| 1988 |
Gale JM, Smerdon MJ. UV-induced pyrimidine dimers and trimethylpsoralen cross-links do not alter chromatin folding in vitro Biochemistry. 27: 7197-7205. PMID 3207669 DOI: 10.1021/Bi00419A006 |
0.55 |
|
| 1987 |
Arnold GE, Dunker AK, Smerdon MJ. Limited nucleosome migration can completely randomize DNA repair patches in intact human cells Journal of Molecular Biology. 196: 433-436. PMID 3656454 DOI: 10.1016/0022-2836(87)90703-0 |
0.64 |
|
| 1987 |
Sidik K, Smerdon MJ. Rearrangement of nucleosome structure during excision repair in xeroderma pigmentosum (group a) human fibroblasts Carcinogenesis. 8: 733-736. PMID 3581432 DOI: 10.1093/Carcin/8.5.733 |
0.568 |
|
| 1987 |
Gale JM, Nissen KA, Smerdon MJ. UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases Proceedings of the National Academy of Sciences of the United States of America. 84: 6644-6658. PMID 3477794 DOI: 10.1073/Pnas.84.19.6644 |
0.637 |
|
| 1986 |
Smerdon MJ. Completion of excision repair in human cells: Relationship between ligation and nucleosome formation Journal of Biological Chemistry. 261: 244-252. PMID 3941074 |
0.534 |
|
| 1986 |
Nissen KA, Lan SY, Smerdon MJ. Stability of nucleosome placement in newly repaired regions of DNA. The Journal of Biological Chemistry. 261: 8585-8. PMID 3722162 |
0.621 |
|
| 1986 |
Ramanathan B, Smerdon MJ. Changes in nuclear protein acetylation in u.v.-damaged human cells. Carcinogenesis. 7: 1087-94. PMID 3087643 DOI: 10.1093/Carcin/7.7.1087 |
0.425 |
|
| 1985 |
Lan SY, Smerdon MJ. A nonuniform distribution of excision repair synthesis in nucleosome core DNA. Biochemistry. 24: 7771-83. PMID 4092038 DOI: 10.1021/Bi00347A041 |
0.662 |
|
| 1985 |
Watkins JF, Smerdon MJ. Nucleosome rearrangement in vitro. 2. Formation of nucleosomes in newly repaired regions of DNA Biochemistry. 24: 7288-7295. PMID 4084582 DOI: 10.1021/Bi00346A040 |
0.641 |
|
| 1985 |
Watkins JF, Smerdon MJ. Nucleosome rearrangement in vitro. 1. Two phases of salt-induced nucleosome migration in nuclei Biochemistry. 24: 7279-7287. PMID 4084581 DOI: 10.1021/Bi00346A039 |
0.431 |
|
| 1984 |
Sidik K, Smerdon MJ. Nuclease sensitivity of repair-incorporated nucleotides in chromatin and nucleosome rearrangement in human cells damaged by methyl methanesulfonate and methylnitrosourea. Carcinogenesis. 5: 245-53. PMID 6230170 DOI: 10.1093/carcin/5.2.245 |
0.537 |
|
| 1983 |
Smerdon MJ. Rearrangements of chromatin structure in newly repaired regions of deoxyribonucleic acid in human cells treated with sodium butyrate or hydroxyurea Biochemistry. 22: 3516-3525. PMID 6615781 DOI: 10.1021/Bi00283A033 |
0.646 |
|
| 1983 |
Smerdon MJ. DNA Repair, Chromosome Alterations and Chromatin Structure. Proceedings of an International Meeting Held at Noordwijkerhout, The Netherlands, 23-25 April 1981. Progress in Mutation Research, Volume 4. A. T. Natarajan , G. Obe , H. Altmann The Quarterly Review of Biology. 58: 239-239. DOI: 10.1086/413240 |
0.374 |
|
| 1982 |
Smerdon MJ, Lan SY, Calza RE, Reeves R. Sodium butyrate stimulates DNA repair in UV-irradiated normal and xeroderma pigmentosum human fibroblasts. The Journal of Biological Chemistry. 257: 13441-7. PMID 7142158 |
0.533 |
|
| 1982 |
Smerdon MJ, Watkins JF, Lieberman MW. Effect of histone H1 removal on the distribution of ultraviolet-induced deoxyribonucleic acid repair synthesis within chromatin Biochemistry. 21: 3879-3885. PMID 7138811 DOI: 10.1021/Bi00259A024 |
0.623 |
|
| 1981 |
Smerdon MJ, Lieberman MW. Removal of histone H1 from intact nuclei alters the digestion of nucleosome core DNA by staphylococcal nuclease Journal of Biological Chemistry. 256: 2480-2483. PMID 7462251 |
0.386 |
|
| 1980 |
Smerdon MJ, Lieberman MW. Distribution within chromatin of deoxyribonucleic acid repair synthesis occurring at different times after ultraviolet radiation Biochemistry. 19: 2992-3000. PMID 7397113 DOI: 10.1021/Bi00554A025 |
0.571 |
|
| 1979 |
Smerdon MJ, Kastan MB, Lieberman MW. Distribution of repair-incorporated nucleotides and nucleosome rearrangement in the chromatin of normal and xeroderma pigmentosum human fibroblasts Biochemistry. 18: 3732-3739. PMID 476082 DOI: 10.1021/Bi00584A014 |
0.459 |
|
| 1978 |
Smerdon MJ, Tlsty TD, Lieberman MW. Distribution of ultraviolet-induced DNA repair synthesis in nuclease sensitive and resistant regions of human chromatin Biochemistry. 17: 2377-2386. PMID 678515 DOI: 10.1021/Bi00605A020 |
0.617 |
|
| 1978 |
Smerdon MJ, Lieberman MW. Nucleosome rearrangement in human chromatin during UV-induced DNA repair synthesis Proceedings of the National Academy of Sciences of the United States of America. 75: 4238-4241. PMID 279912 DOI: 10.1073/Pnas.75.9.4238 |
0.601 |
|
| 1978 |
Smerdon MJ, Lieberman MW. Distribution Of Uv-Induced Dna Repair Synthesis In Human Chromatin Dna Repair Mechanisms. 327-332. DOI: 10.1016/B978-0-12-322650-1.50062-X |
0.542 |
|
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