Hari Srinivasan, Ph.D. - Related publications

2000 University of Wisconsin, Madison, Madison, WI 
Mechanical Engineering, Computer Science, Mathematics
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Huang Y, Xu Y. Implementing logical inference based on DNA assembly. Bio Systems. 198: 104276. PMID 33068673 DOI: 10.1016/j.biosystems.2020.104276   
2020 Cong H, Liu H, Chen Y, Cao Y. Self-evoluting framework of deep convolutional neural network for multilocus protein subcellular localization. Medical & Biological Engineering & Computing. PMID 33078303 DOI: 10.1007/s11517-020-02275-w   
2020 Rhie A, Walenz BP, Koren S, Phillippy AM. Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies. Genome Biology. 21: 245. PMID 32928274 DOI: 10.1186/s13059-020-02134-9   
2020 Tran XT, Oh H. A modified generic second order algorithm with fixed-time stability. Isa Transactions. PMID 33059902 DOI: 10.1016/j.isatra.2020.10.021   
2020 Bui VK, Wei C. CDKAM: a taxonomic classification tool using discriminative k-mers and approximate matching strategies. Bmc Bioinformatics. 21: 468. PMID 33081690 DOI: 10.1186/s12859-020-03777-y   
2020 Xiao P, Cai X, Rajasekaran S. EMS3: An Improved Algorithm for Finding Edit-distance Based Motifs. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32931433 DOI: 10.1109/TCBB.2020.3024222   
2020 Zhou Y, Chen Z, Huang Z, Xiang Y. A Multiobjective Evolutionary Algorithm Based on Objective-Space Localization Selection. Ieee Transactions On Cybernetics. PMID 32966225 DOI: 10.1109/TCYB.2020.3016426   
2020 Zhu CJ, Song M, Liu Q, Becquey C, Bi J. Benchmark on Indexing Algorithms for Accelerating Molecular Similarity Search. Journal of Chemical Information and Modeling. PMID 33095006 DOI: 10.1021/acs.jcim.0c00393   
2020 Isacchini G, Olivares C, Nourmohammad A, Walczak AM, Mora T. SOS: online probability estimation and generation of T-and B-cell receptors. Bioinformatics (Oxford, England). PMID 32814974 DOI: 10.1093/bioinformatics/btaa574   
2020 Wang B, Chen Y, Liu W, Qin J, Du Y, Han G, He S. Real-time Hierarchical Supervoxel Segmentation via a Minimum Spanning Tree. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. PMID 33074808 DOI: 10.1109/TIP.2020.3030502   
2020 Chen W, Guohua Z. Decomposition and adaptive weight adjustment method with biogeography/complex algorithm for many-objective optimization. Plos One. 15: e0240131. PMID 33035263 DOI: 10.1371/journal.pone.0240131   
2020 Chen RB, Chen PY, Hsu CL, Wong WK. Hybrid algorithms for generating optimal designs for discriminating multiple nonlinear models under various error distributional assumptions. Plos One. 15: e0239864. PMID 33017415 DOI: 10.1371/journal.pone.0239864   
2020 Raouf MA, Hashim F, Liew JT, Alezabi KA. Pseudorandom sequence contention algorithm for IEEE 802.11ah based internet of things network. Plos One. 15: e0237386. PMID 32790697 DOI: 10.1371/journal.pone.0237386   
2020 Liu H, Yu W, Chen G. Discrete-Time Algorithms for Distributed Constrained Convex Optimization With Linear Convergence Rates. Ieee Transactions On Cybernetics. PMID 33095723 DOI: 10.1109/TCYB.2020.3022240   
2020 Cabeen RP, Toga AW, Laidlaw DH. Tractography Processing with the Sparse Closest Point Transform. Neuroinformatics. PMID 32860124 DOI: 10.1007/s12021-020-09488-2   
2020 Ghaffari S, Soleimani P, Li KF, Capson DW. A Novel Hardware-Software Co-Design and Implementation of the HOG Algorithm. Sensors (Basel, Switzerland). 20. PMID 33023233 DOI: 10.3390/s20195655   
2020 Xu D, Zhang J, Xu H, Zhang Y, Chen W, Gao R, Dehmer M. Multi-scale supervised clustering-based feature selection for tumor classification and identification of biomarkers and targets on genomic data. Bmc Genomics. 21: 650. PMID 32962626 DOI: 10.1186/s12864-020-07038-3   
2020 Semwal R, Aier I, Raj U, Varadwaj PK. Pr[m]: An Algorithm for Protein Motif Discovery. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32750855 DOI: 10.1109/TCBB.2020.2999262   
2020 Zhou Y, He X, Chen Z, Jiang S. A Neighborhood Regression Optimization Algorithm for Computationally Expensive Optimization Problems. Ieee Transactions On Cybernetics. PMID 33027015 DOI: 10.1109/TCYB.2020.3020727   
2020 Khalid S, Abbas WB, Kim HS, Niaz MT. Evolutionary Algorithm Based Capacity Maximization of 5G/B5G Hybrid Pre-Coding Systems. Sensors (Basel, Switzerland). 20. PMID 32957686 DOI: 10.3390/s20185338   
2020 Wang C, Wang Y, Yu G. Efficient Global Multi-object Tracking Under Minimum-cost Circulation Framework. Ieee Transactions On Pattern Analysis and Machine Intelligence. PMID 32966213 DOI: 10.1109/TPAMI.2020.3026257   
2020 Zhang P, Xu Z, Wang Q, Fan S, Cheng W, Wang H, Wu Y. A novel variable selection method based on combined moving window and intelligent optimization algorithm for variable selection in chemical modeling. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 246: 118986. PMID 33032116 DOI: 10.1016/j.saa.2020.118986   
2020 Zhang R, Zhang Y, Sun J, Li Q. Pattern Synthesis of Linear Antenna Array Using Improved Differential Evolution Algorithm with SPS Framework. Sensors (Basel, Switzerland). 20. PMID 32927670 DOI: 10.3390/s20185158   
2020 Wang X, Yang EH, He DK, Song L, Yu X. Rate Distortion Optimization: A Joint Framework and Algorithms for Random Access Hierarchical Video Coding. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. PMID 33026988 DOI: 10.1109/TIP.2020.3028280   
2020 Li XJ, Wang N. Data-Driven Fault Estimation and Control for Unknown Discrete-Time Systems via Multiobjective Optimization Method. Ieee Transactions On Cybernetics. PMID 32784145 DOI: 10.1109/TCYB.2020.3010222   
2020 Yang Q, Tian GL, Qin JW, Wu BQ, Tan L, Xu L, Wu SZ, Yang JT, Jiang JH, Yu RQ. Coupling bootstrap with synergy self-organizing map-based orthogonal partial least squares discriminant analysis: Stable metabolic biomarker selection for inherited metabolic diseases. Talanta. 219: 121370. PMID 32887087 DOI: 10.1016/j.talanta.2020.121370   
2020 Bush JT, Pogány P, Pickett SD, Barker M, Baxter A, Campos S, Cooper AWJ, Hirst DJ, Inglis G, Nadin A, Patel VK, Poole D, Pritchard J, Washio Y, White G, et al. A Turing test for molecular generators. Journal of Medicinal Chemistry. PMID 32955254 DOI: 10.1021/acs.jmedchem.0c01148   
2020 Dong D, Wang Y, Kadis A, Wilkinson TD. Cost-optimized heterogeneous FPGA architecture for non-iterative hologram generation. Applied Optics. 59: 7540-7546. PMID 32902452 DOI: 10.1364/AO.398904   
2020 Li J, Li X, Zhang HT, Chen G, Yuan Y. Data-Driven Discovery of Block-Oriented Nonlinear Models Using Sparse Null-Subspace Methods. Ieee Transactions On Cybernetics. PMID 32946407 DOI: 10.1109/TCYB.2020.3015705   
2020 Luo J, Chen R, Zhang X, Wang Y, Luo H, Yan C, Huo Z. LROD: An Overlap Detection Algorithm for Long Reads Based on -mer Distribution. Frontiers in Genetics. 11: 632. PMID 32849762 DOI: 10.3389/fgene.2020.00632   
2020 Zhao Y, Huang Y, Wu H, Zhang M, Liu Z, Ding S. Negentropy-Based Sparsity-Promoting Reconstruction with Fast Iterative Solution from Noisy Measurements. Sensors (Basel, Switzerland). 20. PMID 32962241 DOI: 10.3390/s20185384   
2020 Nie F, Wang Z, Tian L, Wang R, Li X. Subspace Sparse Discriminative Feature Selection. Ieee Transactions On Cybernetics. PMID 33055053 DOI: 10.1109/TCYB.2020.3025205   
2020 Lin C, Liu L, Li C, Kobbelt L, Wang B, Xin S, Wang W. SEG-MAT: 3D Shape Segmentation Using Medial Axis Transform. Ieee Transactions On Visualization and Computer Graphics. PMID 33079671 DOI: 10.1109/TVCG.2020.3032566   
2020 Guo Z, Wu S, Ohno M, Yoshida R. A Bayesian Algorithm for Retrosynthesis. Journal of Chemical Information and Modeling. PMID 32975943 DOI: 10.1021/acs.jcim.0c00320   
2020 Wei Z, Ding S, Duan M, Liu S, Huang L, Zhou F. FeSTwo, a two-step feature selection algorithm based on feature engineering and sampling for the chronological age regression problem. Computers in Biology and Medicine. 125: 104008. PMID 33035960 DOI: 10.1016/j.compbiomed.2020.104008   
2020 Zhu J, Guo R, Li Z, Zhang J, Pang S. Registration of multi-view point sets under the perspective of expectation-maximization. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. PMID 32956059 DOI: 10.1109/TIP.2020.3024096   
2020 Zhang F, Mei Y, Nguyen S, Zhang M. Evolving Scheduling Heuristics via Genetic Programming With Feature Selection in Dynamic Flexible Job-Shop Scheduling. Ieee Transactions On Cybernetics. PMID 33079689 DOI: 10.1109/TCYB.2020.3024849   
2020 Díez-González J, Verde P, Ferrero-Guillén R, Álvarez R, Pérez H. Hybrid Memetic Algorithm for the Node Location Problem in Local Positioning Systems. Sensors (Basel, Switzerland). 20. PMID 32987872 DOI: 10.3390/s20195475   
2020 Zhao F, Gao W, Jiang ZP, Liu T. Event-Triggered Adaptive Optimal Control With Output Feedback: An Adaptive Dynamic Programming Approach. Ieee Transactions On Neural Networks and Learning Systems. PMID 33035169 DOI: 10.1109/TNNLS.2020.3027301   
2020 Sariyanidi E, Zampella CJ, Bartley KG, Herrington JD, Satterthwaite TD, Schultz RT, Tunc B. Discovering Synchronized Subsets of Sequences: A Large Scale Solution. Proceedings. Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2020: 9490-9499. PMID 32968342 DOI: 10.1109/cvpr42600.2020.00951   
2020 LaPierre N, Alser M, Eskin E, Koslicki D, Mangul S. Metalign: efficient alignment-based metagenomic profiling via containment min hash. Genome Biology. 21: 242. PMID 32912225 DOI: 10.1186/s13059-020-02159-0   
2020 Carrillo F, Roner S, von Atzigen M, Schweizer A, Nagy L, Vlachopoulos L, Snedeker JG, Fürnstahl P. An automatic genetic algorithm framework for the optimization of three-dimensional surgical plans of forearm corrective osteotomies. Medical Image Analysis. 60: 101598. PMID 31731091 DOI: 10.1016/j.media.2019.101598   
2020 Tang C, Dou L. An Improved Game Theory-Based Cooperative Localization Algorithm for Eliminating the Conflicting Information of Multi-Sensors. Sensors (Basel, Switzerland). 20. PMID 33003410 DOI: 10.3390/s20195579   
2020 Gao S, Sun C, Xiang C, Qin K, Lee TH. Finite-Horizon Optimal Control of Boolean Control Networks: A Unified Graph-Theoretical Approach. Ieee Transactions On Neural Networks and Learning Systems. PMID 33048765 DOI: 10.1109/TNNLS.2020.3027599   
2020 Kovatch P, Gai L, Cho HM, Fluder E, Jiang D. Optimizing High-Performance Computing Systems for Biomedical Workloads. Ieee International Symposium On Parallel & Distributed Processing, Workshops and Phd Forum : [Proceedings]. Ieee International Symposium On Parallel & Distributed Processing, Workshops and Phd Forum. 2020: 183-192. PMID 33088611 DOI: 10.1109/ipdpsw50202.2020.00040   
2020 Mikulak-Klucznik B, Gołębiowska P, Bayly AA, Popik O, Klucznik T, Szymkuć S, Gajewska EP, Dittwald P, Staszewska-Krajewska O, Beker W, Badowski T, Scheidt KA, Molga K, Młynarski J, Mrksich M, et al. Computational planning of the synthesis of complex natural products. Nature. PMID 33049755 DOI: 10.1038/s41586-020-2855-y   
2020 Liu D, Zheng P, Wu J, Yin H, Zhang L. A new method for cylindricity error evaluation based on increment-simplex algorithm. Science Progress. 103: 36850420959878. PMID 33028152 DOI: 10.1177/0036850420959878   
2020 Nam JH, Kim D, Chung D. Sparse Linear Discriminant Analysis using the Prior-Knowledge-Guided Block Covariance Matrix. Chemometrics and Intelligent Laboratory Systems : An International Journal Sponsored by the Chemometrics Society. 206. PMID 32968333 DOI: 10.1016/j.chemolab.2020.104142   
2020 Mallick A, Bashar MK, Truesdell DS, Calhoun BH, Joshi S, Shukla N. Using synchronized oscillators to compute the maximum independent set. Nature Communications. 11: 4689. PMID 32943644 DOI: 10.1038/s41467-020-18445-1   
2020 Ning Z, Gao Y, Wang A. Design and performance analysis of a new optimization algorithm based on Finite Element Analysis. Science Progress. 103: 36850420950852. PMID 32893740 DOI: 10.1177/0036850420950852