Nengjun Yi - Publications

Affiliations: 
Biostatistics University of Alabama, Birmingham, Birmingham, AL, United States 
Area:
Biostatistics Biology, Genetics

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Weige CC, Birtwistle MR, Mallick H, Yi N, Berrong Z, Cloessner E, Duff K, Tidwell J, Clendenning M, Wilkerson B, Farrell C, Bunz F, Ji H, Shtutman M, Creek KE, et al. Transcriptomes and shRNA suppressors in a TP53 allele-specific model of early-onset colon cancer in African Americans. Molecular Cancer Research : McR. 12: 1029-41. PMID 24743655 DOI: 10.1158/1541-7786.MCR-13-0286-T  0.72
2014 Jackson SA, Davis AA, Li J, Yi N, McCormick SR, Grant C, Fallen T, Crawford B, Loranger K, Litton J, Arun B, Vande Wydeven K, Sidani A, Farmer K, Sanders M, et al. Characteristics of individuals with breast cancer rearrangements in BRCA1 and BRCA2. Cancer. 120: 1557-64. PMID 24522996 DOI: 10.1002/cncr.28577  0.72
2013 Lin WY, Yi N, Lou XY, Zhi D, Zhang K, Gao G, Tiwari HK, Liu N. Haplotype kernel association test as a powerful method to identify chromosomal regions harboring uncommon causal variants. Genetic Epidemiology. 37: 560-70. PMID 23740760 DOI: 10.1002/gepi.21740  0.72
2012 Yi N, Ma S. Hierarchical shrinkage priors and model fitting for high-dimensional generalized linear models. Statistical Applications in Genetics and Molecular Biology. 11. PMID 23192052 DOI: 10.1515/1544-6115.1803  0.72
2012 Vazquez AI, de los Campos G, Klimentidis YC, Rosa GJ, Gianola D, Yi N, Allison DB. A comprehensive genetic approach for improving prediction of skin cancer risk in humans. Genetics. 192: 1493-502. PMID 23051645 DOI: 10.1534/genetics.112.141705  0.72
2012 Lin WY, Yi N, Zhi D, Zhang K, Gao G, Tiwari HK, Liu N. Haplotype-based methods for detecting uncommon causal variants with common SNPs. Genetic Epidemiology. 36: 572-82. PMID 22706849 DOI: 10.1002/gepi.21650  0.72
2012 Banerjee S, Yi N. Identifying QTL for multiple complex traits in experimental crosses. Methods in Molecular Biology (Clifton, N.J.). 871: 205-25. PMID 22565839 DOI: 10.1007/978-1-61779-785-9_11  0.72
2011 Yi N, Liu N, Zhi D, Li J. Hierarchical generalized linear models for multiple groups of rare and common variants: jointly estimating group and individual-variant effects. Plos Genetics. 7: e1002382. PMID 22144906 DOI: 10.1371/journal.pgen.1002382  0.72
2011 Li J, Zhang K, Yi N. A Bayesian hierarchical model for detecting haplotype-haplotype and haplotype-environment interactions in genetic association studies. Human Heredity. 71: 148-60. PMID 21778734 DOI: 10.1159/000324841  0.72
2011 Wu G, Yi N, Absher D, Zhi D. Statistical quantification of methylation levels by next-generation sequencing. Plos One. 6: e21034. PMID 21698242 DOI: 10.1371/journal.pone.0021034  0.72
2011 Kaklamani V, Yi N, Zhang K, Sadim M, Offit K, Oddoux C, Ostrer H, Mantzoros C, Pasche B. Polymorphisms of ADIPOQ and ADIPOR1 and prostate cancer risk. Metabolism: Clinical and Experimental. 60: 1234-43. PMID 21397927 DOI: 10.1016/j.metabol.2011.01.005  0.72
2011 Yi N, Zhi D. Bayesian analysis of rare variants in genetic association studies. Genetic Epidemiology. 35: 57-69. PMID 21181897 DOI: 10.1002/gepi.20554  0.72
2011 Yi N, Kaklamani VG, Pasche B. Bayesian analysis of genetic interactions in case-control studies, with application to adiponectin genes and colorectal cancer risk. Annals of Human Genetics. 75: 90-104. PMID 20846215 DOI: 10.1111/j.1469-1809.2010.00605.x  0.72
2010 Yi N. Statistical analysis of genetic interactions. Genetics Research. 92: 443-59. PMID 21429274 DOI: 10.1017/S0016672310000595  0.72
2010 Pasche B, Wisinski KB, Sadim M, Kaklamani V, Pennison MJ, Zeng Q, Bellam N, Zimmerman J, Yi N, Zhang K, Baron J, Stram DO, Hayes MG. Constitutively decreased TGFBR1 allelic expression is a common finding in colorectal cancer and is associated with three TGFBR1 SNPs. Journal of Experimental & Clinical Cancer Research : Cr. 29: 57. PMID 20500843 DOI: 10.1186/1756-9966-29-57  0.72
2010 Pasche B, Yi N. Candidate gene association studies: successes and failures. Current Opinion in Genetics & Development. 20: 257-61. PMID 20417090 DOI: 10.1016/j.gde.2010.03.006  0.72
2010 Li J, Reynolds R, Pomp D, Allison DB, Yi N. Mapping interacting QTL for count phenotypes using hierarchical Poisson and binomial models: an application to reproductive traits in mice. Genetics Research. 92: 13-23. PMID 20199696 DOI: 10.1017/S0016672310000029  0.36
2010 Ankra-Badu GA, Shriner D, Le Bihan-Duval E, Mignon-Grasteau S, Pitel F, Beaumont C, Duclos MJ, Simon J, Porter TE, Vignal A, Cogburn LA, Allison DB, Yi N, Aggrey SE. Mapping main, epistatic and sex-specific QTL for body composition in a chicken population divergently selected for low or high growth rate. Bmc Genomics. 11: 107. PMID 20149241 DOI: 10.1186/1471-2164-11-107  0.72
2009 Shriner D, Yi N. Deviance Information Criterion (DIC) in Bayesian Multiple QTL Mapping. Computational Statistics & Data Analysis. 53: 1850-1860. PMID 20161286 DOI: 10.1016/j.csda.2008.01.016  0.72
2009 Yi N, Banerjee S. Hierarchical generalized linear models for multiple quantitative trait locus mapping. Genetics. 181: 1101-13. PMID 19139143 DOI: 10.1534/genetics.108.099556  0.72
2008 Banerjee S, Yandell BS, Yi N. Bayesian quantitative trait loci mapping for multiple traits. Genetics. 179: 2275-89. PMID 18689903 DOI: 10.1534/genetics.108.088427  0.72
2008 Yi N, Xu S. Bayesian LASSO for quantitative trait loci mapping. Genetics. 179: 1045-55. PMID 18505874 DOI: 10.1534/genetics.107.085589  0.72
2007 Hsu HC, Lu L, Yi N, Van Zant G, Williams RW, Mountz JD. Quantitative trait locus (QTL) mapping in aging systems. Methods in Molecular Biology (Clifton, N.J.). 371: 321-48. PMID 17634591 DOI: 10.1007/978-1-59745-361-5_23  0.72
2007 Yi N, Banerjee S, Pomp D, Yandell BS. Bayesian mapping of genomewide interacting quantitative trait loci for ordinal traits. Genetics. 176: 1855-64. PMID 17507680 DOI: 10.1534/genetics.107.071142  0.72
2007 Yi N, Shriner D, Banerjee S, Mehta T, Pomp D, Yandell BS. An efficient Bayesian model selection approach for interacting quantitative trait loci models with many effects. Genetics. 176: 1865-77. PMID 17483424 DOI: 10.1534/genetics.107.071365  0.72
2007 Yandell BS, Mehta T, Banerjee S, Shriner D, Venkataraman R, Moon JY, Neely WW, Wu H, von Smith R, Yi N. R/qtlbim: QTL with Bayesian Interval Mapping in experimental crosses. Bioinformatics (Oxford, England). 23: 641-3. PMID 17237038 DOI: 10.1093/bioinformatics/btm011  0.72
2006 Musani SK, Zhang HG, Hsu HC, Yi N, Gorman BS, Allison DB, Mountz JD. Principal component analysis of quantitative trait loci for immune response to adenovirus in mice. Hereditas. 143: 189-97. PMID 17362354 DOI: 10.1111/j.2006.0018-0661.01925.x  0.72
2006 Yang R, Yi N, Xu S. Box-Cox transformation for QTL mapping. Genetica. 128: 133-43. PMID 17028946 DOI: 10.1007/s10709-005-5577-z  0.72
2006 Yi N, Zinniel DK, Kim K, Eisen EJ, Bartolucci A, Allison DB, Pomp D. Bayesian analyses of multiple epistatic QTL models for body weight and body composition in mice. Genetical Research. 87: 45-60. PMID 16545150 DOI: 10.1017/S0016672306007944  0.36
2005 De Luca M, Yi N, Allison DB, Leips J, Ruden DM. Mapping quantitative trait loci affecting variation in Drosophila triacylglycerol storage. Obesity Research. 13: 1596-605. PMID 16222063 DOI: 10.1038/oby.2005.196  0.72
2005 Zhang HG, High KA, Wu Q, Yang P, Schlachterman A, Yu S, Yi N, Hsu HC, Mountz JD. Genetic analysis of the antibody response to AAV2 and factor IX. Molecular Therapy : the Journal of the American Society of Gene Therapy. 11: 866-74. PMID 15922957 DOI: 10.1016/j.ymthe.2005.02.014  0.72
2005 Yi N, Yandell BS, Churchill GA, Allison DB, Eisen EJ, Pomp D. Bayesian model selection for genome-wide epistatic quantitative trait loci analysis. Genetics. 170: 1333-44. PMID 15911579 DOI: 10.1534/genetics.104.040386  0.72
2005 Vasselli JR, Weindruch R, Heymsfield SB, Pi-Sunyer FX, Boozer CN, Yi N, Wang C, Pietrobelli A, Allison DB. Intentional weight loss reduces mortality rate in a rodent model of dietary obesity. Obesity Research. 13: 693-702. PMID 15897478 DOI: 10.1038/oby.2005.78  0.72
2004 Churchill GA, Airey DC, Allayee H, Angel JM, Attie AD, Beatty J, Beavis WD, Belknap JK, Bennett B, Berrettini W, Bleich A, Bogue M, Broman KW, Buck KJ, Buckler E, ... ... Yi N, et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nature Genetics. 36: 1133-7. PMID 15514660 DOI: 10.1038/ng1104-1133  0.36
2004 Beasley TM, Yang D, Yi N, Bullard DC, Travis EL, Amos CI, Xu S, Allison DB. Joint tests for quantitative trait loci in experimental crosses. Genetics, Selection, Evolution : Gse. 36: 601-19. PMID 15496283 DOI: 10.1051/gse:2004020  0.72
2004 Yi N, Chiu S, Allison DB, Fisler JS, Warden CH. Epistatic interaction between two nonstructural loci on chromosomes 7 and 3 influences hepatic lipase activity in BSB mice Journal of Lipid Research. 45: 2063-2070. PMID 15314098 DOI: 10.1194/jlr.M400136-JLR200  0.72
2004 Yi N. A unified Markov chain Monte Carlo framework for mapping multiple quantitative trait loci. Genetics. 167: 967-75. PMID 15238545 DOI: 10.1534/genetics.104.026286  0.72
2004 Yi N, Diament A, Chiu S, Kim K, Allison DB, Fisler JS, Warden CH. Characterization of epistasis influencing complex spontaneous obesity in the BSB model Genetics. 167: 399-409. PMID 15166164 DOI: 10.1534/genetics.167.1.399  0.72
2004 Farahani P, Fisler JS, Wong H, Diament AL, Yi N, Warden CH. Reciprocal hemizygosity analysis of mouse hepatic lipase reveals influence on obesity Obesity Research. 12: 292-305. PMID 14981222  0.72
2004 Yi N, Xu S, George V, Allison DB. Mapping multiple quantitative trait Loci for ordinal traits. Behavior Genetics. 34: 3-15. PMID 14739693 DOI: 10.1023/B:BEGE.0000009473.43185.43  0.72
2004 Warden CH, Yi N, Fisler J. Epistasis among genes is a universal phenomenon in obesity: Evidence from rodent models Nutrition. 20: 74-77. PMID 14698018 DOI: 10.1016/j.nut.2003.09.013  0.72
2003 Yi N, Xu S, Allison DB. Bayesian model choice and search strategies for mapping interacting quantitative trait Loci. Genetics. 165: 867-83. PMID 14573494  0.72
2003 Yi N, George V, Allison DB. Stochastic search variable selection for identifying multiple quantitative trait loci. Genetics. 164: 1129-38. PMID 12871920  0.72
2002 Yi N, Xu S. Linkage analysis of quantitative trait loci in multiple line crosses. Genetica. 114: 217-30. PMID 12206360 DOI: 10.1023/A:1016296225065  0.72
2002 Yi N, Xu S. Mapping quantitative trait loci with epistatic effects. Genetical Research. 79: 185-98. PMID 12073556 DOI: 10.1017/S0016672301005511  0.72
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