Xiangqin Cui - Publications

Biostatistics University of Alabama, Birmingham, Birmingham, AL, United States 
Biostatistics Biology

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Yang C, Bartolucci AA, Cui X. Multigroup Equivalence Analysis for High-Dimensional Expression Data. Cancer Informatics. 14: 253-263. PMID 26628859 DOI: 10.4137/CIN.S17304  0.68
2015 Mrug M, Zhou J, Yang C, Aronow BJ, Cui X, Schoeb TR, Siegal GP, Yoder BK, Guay-Woodford LM. Genetic and Informatic Analyses Implicate Kif12 as a Candidate Gene within the Mpkd2 Locus That Modulates Renal Cystic Disease Severity in the Cys1cpk Mouse. Plos One. 10: e0135678. PMID 26295839 DOI: 10.1371/journal.pone.0135678  0.68
2015 Cui X, Yu S, Tamhane A, Causey ZL, Steg A, Danila MI, Reynolds RJ, Wang J, Wanzeck KC, Tang Q, Ledbetter SS, Redden DT, Johnson MR, Bridges SL. Simple regression for correcting ΔCt bias in RT-qPCR low-density array data normalization. Bmc Genomics. 16: 82. PMID 25888492 DOI: 10.1186/s12864-015-1274-1  0.68
2015 Tang Q, Danila MI, Cui X, Parks L, Baker BJ, Reynolds RJ, Raman C, Wanseck KC, Redden DT, Johnson MR, Bridges SL. Expression of Interferon-γ Receptor Genes in Peripheral Blood Mononuclear Cells Is Associated With Rheumatoid Arthritis and Its Radiographic Severity in African Americans. Arthritis & Rheumatology (Hoboken, N.J.). 67: 1165-70. PMID 25708927 DOI: 10.1002/art.39056  0.68
2014 Stoll ML, Kumar R, Morrow CD, Lefkowitz EJ, Cui X, Genin A, Cron RQ, Elson CO. Altered microbiota associated with abnormal humoral immune responses to commensal organisms in enthesitis-related arthritis. Arthritis Research & Therapy. 16: 486. PMID 25434931 DOI: 10.1186/s13075-014-0486-0  0.68
2014 Boddu R, Yang C, O'Connor AK, Hendrickson RC, Boone B, Cui X, Garcia-Gonzalez M, Igarashi P, Onuchic LF, Germino GG, Guay-Woodford LM. Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1. Journal of Molecular Medicine (Berlin, Germany). 92: 1045-56. PMID 24984783 DOI: 10.1007/s00109-014-1185-7  0.68
2014 Barnes J, Pat B, Chen YW, Powell PC, Bradley WE, Zheng J, Karki A, Cui X, Guichard J, Wei CC, Collawn J, Dell'Italia LJ. Whole-genome profiling highlights the molecular complexity underlying eccentric cardiac hypertrophy. Therapeutic Advances in Cardiovascular Disease. 8: 97-118. PMID 24692245 DOI: 10.1177/1753944714527490  0.68
2014 Johnson SL, Hughes SO, Cui X, Li X, Allison DB, Liu Y, Goodell LS, Nicklas T, Power TG, Vollrath K. Portion sizes for children are predicted by parental characteristics and the amounts parents serve themselves. The American Journal of Clinical Nutrition. 99: 763-70. PMID 24477036 DOI: 10.3945/ajcn.113.078311  0.68
2013 Thalacker-Mercer A, Stec M, Cui X, Cross J, Windham S, Bamman M. Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy Physiological Genomics. 45: 499-507. PMID 23632419 DOI: 10.1152/physiolgenomics.00167.2012  0.68
2013 Reynolds RJ, Cui X, Vaughan LK, Redden DT, Causey Z, Perkins E, Shah T, Hughes LB, Damle A, Kern M, Gregersen PK, Johnson MR, Bridges SL. Gene expression patterns in peripheral blood cells associated with radiographic severity in African Americans with early rheumatoid arthritis. Rheumatology International. 33: 129-37. PMID 22238028 DOI: 10.1007/s00296-011-2355-3  0.68
2012 Wu H, Wu MC, Zhi D, Santorico SA, Cui X. Statistics for next generation sequencing - meeting report. Frontiers in Genetics. 3: 128. PMID 22811695 DOI: 10.3389/fgene.2012.00128  0.68
2012 Zhou J, Ouyang X, Schoeb TR, Bolisetty S, Cui X, Mrug S, Yoder BK, Johnson MR, Szalai AJ, Mrug M. Kidney injury accelerates cystogenesis via pathways modulated by heme oxygenase and complement. Journal of the American Society of Nephrology : Jasn. 23: 1161-71. PMID 22518005 DOI: 10.1681/ASN.2011050442  0.68
2012 Moskowitz-Kassai E, Mackelaite L, Chen J, Patel K, Dadhania DM, Gross SS, Chander P, Delaney V, Deng L, Chen L, Cui X, Suthanthiran M, Goligorsky MS. Excretion of anti-angiogenic proteins in patients with chronic allograft dysfunction. Nephrology, Dialysis, Transplantation : Official Publication of the European Dialysis and Transplant Association - European Renal Association. 27: 494-7. PMID 22253069 DOI: 10.1093/ndt/gfr638  0.68
2012 Duarte CW, Willey CD, Zhi D, Cui X, Harris JJ, Vaughan LK, Mehta T, McCubrey RO, Khodarev NN, Weichselbaum RR, Gillespie GY. Expression signature of IFN/STAT1 signaling genes predicts poor survival outcome in glioblastoma multiforme in a subtype-specific manner. Plos One. 7: e29653. PMID 22242177 DOI: 10.1371/journal.pone.0029653  0.68
2012 Duell BL, Carey AJ, Tan CK, Cui X, Webb RI, Totsika M, Schembri MA, Derrington P, Irving-Rodgers H, Brooks AJ, Cripps AW, Crowley M, Ulett GC. Innate transcriptional networks activated in bladder in response to uropathogenic Escherichia coli drive diverse biological pathways and rapid synthesis of IL-10 for defense against bacterial urinary tract infection. Journal of Immunology (Baltimore, Md. : 1950). 188: 781-92. PMID 22184725 DOI: 10.4049/jimmunol.1101231  0.68
2011 Chen YW, Pat B, Gladden JD, Zheng J, Powell P, Wei CC, Cui X, Husain A, Dell'italia LJ. Dynamic molecular and histopathological changes in the extracellular matrix and inflammation in the transition to heart failure in isolated volume overload. American Journal of Physiology. Heart and Circulatory Physiology. 300: H2251-60. PMID 21421827 DOI: 10.1152/ajpheart.01104.2010  0.68
2011 Gao L, Fang Z, Zhang K, Zhi D, Cui X. Length bias correction for RNA-seq data in gene set analyses. Bioinformatics (Oxford, England). 27: 662-9. PMID 21252076 DOI: 10.1093/bioinformatics/btr005  0.68
2011 Wu X, Patki A, Lara-Castro C, Cui X, Zhang K, Walton RG, Osier MV, Gadbury GL, Allison DB, Martin M, Garvey WT. Genes and biochemical pathways in human skeletal muscle affecting resting energy expenditure and fuel partitioning. Journal of Applied Physiology (Bethesda, Md. : 1985). 110: 746-55. PMID 21109598 DOI: 10.1152/japplphysiol.00293.2010  0.68
2010 Zhou J, Ouyang X, Cui X, Schoeb TR, Smythies LE, Johnson MR, Guay-Woodford LM, Chapman AB, Mrug M. Renal CD14 expression correlates with the progression of cystic kidney disease. Kidney International. 78: 550-60. PMID 20555320 DOI: 10.1038/ki.2010.175  0.68
2010 Thalacker-Mercer AE, Dell'Italia LJ, Cui X, Cross JM, Bamman MM. Differential genomic responses in old vs. young humans despite similar levels of modest muscle damage after resistance loading. Physiological Genomics. 40: 141-9. PMID 19903761 DOI: 10.1152/physiolgenomics.00151.2009  0.68
2009 Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, et al. Repeatability of published microarray gene expression analyses. Nature Genetics. 41: 149-55. PMID 19174838 DOI: 10.1038/ng.295  0.68
2009 Cui X, Loraine AE. Consistency analysis of redundant probe sets on affymetrix three-prime expression arrays and applications to differential mRNA processing. Plos One. 4: e4229. PMID 19165320 DOI: 10.1371/journal.pone.0004229  0.68
2007 Wu X, Wang J, Cui X, Maianu L, Rhees B, Rosinski J, So WV, Willi SM, Osier MV, Hill HS, Page GP, Allison DB, Martin M, Garvey WT. The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle. Endocrine. 31: 5-17. PMID 17709892 DOI: 10.1007/s12020-007-0007-x  0.68
2007 Ye J, Cui X, Loraine A, Bynum K, Kim NC, White G, De Luca M, Garfinkel MD, Lu X, Ruden DM. Methods for nutrigenomics and longevity studies in Drosophila: effects of diets high in sucrose, palmitic acid, soy, or beef. Methods in Molecular Biology (Clifton, N.J.). 371: 111-41. PMID 17634578 DOI: 10.1007/978-1-59745-361-5_10  0.68
2006 Cui X, Loraine A. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ath1 expression profiling data Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 223-226. PMID 17369640  0.68
2006 Cui X, Affourtit J, Shockley KR, Woo Y, Churchill GA. Inheritance patterns of transcript levels in F1 hybrid mice Genetics. 174: 627-637. PMID 16888332 DOI: 10.1534/genetics.106.060251  0.68
2005 Yao H, Guo L, Fu Y, Borsuk LA, Wen TJ, Skibbe DS, Cui X, Scheffler BE, Cao J, Emrich SJ, Ashlock DA, Schnable PS. Evaluation of five ab initio gene prediction programs for the discovery of maize genes. Plant Molecular Biology. 57: 445-60. PMID 15830133 DOI: 10.1007/s11103-005-0271-1  0.68
2005 Mrug M, Li R, Cui X, Schoeb TR, Churchill GA, Guay-Woodford LM. Kinesin family member 12 is a candidate polycystic kidney disease modifier in the cpk mouse. Journal of the American Society of Nephrology : Jasn. 16: 905-16. PMID 15728779 DOI: 10.1681/ASN.2004121083  0.68
2004 Lobenhofer EK, Cui X, Bennett L, Cable PL, Merrick BA, Churchill GA, Afshari CA. Exploration of low-dose estrogen effects: Identification of No Observed Transcriptional Effect Level (NOTEL) Toxicologic Pathology. 32: 482-492. PMID 15223774 DOI: 10.1080/01926230490483324  0.68
2003 Cui X, Churchill GA. Statistical tests for differential expression in cDNA microarray experiments Genome Biology. 4. PMID 12702200 DOI: 10.1186/gb-2003-4-4-210  0.68
2003 Cui X, Hsia AP, Liu F, Ashlock DA, Wise RP, Schnable PS. Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize. Genetics. 163: 685-98. PMID 12618406  0.68
2002 Skibbe DS, Liu F, Wen TJ, Yandeau MD, Cui X, Cao J, Simmons CR, Schnable PS. Characterization of the aldehyde dehydrogenase gene families of Zea mays and Arabidopsis. Plant Molecular Biology. 48: 751-64. PMID 11999848 DOI: 10.1023/A:1014870429630  0.68
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