Jayanta Chaudhuri - Publications

Affiliations: 
Weill Cornell Medical College, New York, NY, United States 
Area:
Genetics, Oncology, Biostatistics Biology

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Casellas R, Basu U, Yewdell WT, Chaudhuri J, Robbiani DF, Di Noia JM. Mutations, kataegis and translocations in B cells: understanding AID promiscuous activity. Nature Reviews. Immunology. PMID 26898111 DOI: 10.1038/Nri.2016.2  0.48
2016 DiMenna LJ, Chaudhuri J. Regulating infidelity: RNA-mediated recruitment of AID to DNA during class switch recombination. European Journal of Immunology. 46: 523-30. PMID 26799454 DOI: 10.1002/Eji.201545809  0.48
2015 Balestrini A, Nicolas L, Yang-Lott K, Guryanova OA, Levine RL, Bassing CH, Chaudhuri J, Petrini JH. Defining ATM-independent Functions of the Mre11 Complex with a Novel Mouse Model. Molecular Cancer Research : McR. PMID 26538284 DOI: 10.1158/1541-7786.Mcr-15-0281  0.48
2015 Vaidyanathan B, Chaudhuri J. Epigenetic Codes Programing Class Switch Recombination. Frontiers in Immunology. 6: 405. PMID 26441954 DOI: 10.3389/Fimmu.2015.00405  0.48
2015 Dominguez PM, Teater M, Chambwe N, Kormaksson M, Redmond D, Ishii J, Vuong B, Chaudhuri J, Melnick A, Vasanthakumar A, Godley LA, Papavasiliou FN, Elemento O, Shaknovich R. DNA Methylation Dynamics of Germinal Center B Cells Are Mediated by AID. Cell Reports. 12: 2086-98. PMID 26365193 DOI: 10.1016/J.Celrep.2015.08.036  0.48
2015 Zheng S, Vuong BQ, Vaidyanathan B, Lin JY, Huang FT, Chaudhuri J. Non-coding RNA Generated following Lariat Debranching Mediates Targeting of AID to DNA. Cell. 161: 762-73. PMID 25957684 DOI: 10.1016/J.Cell.2015.03.020  0.48
2015 Pucella JN, Yen WF, Kim MV, van der Veeken J, Socci ND, Naito Y, Li MO, Iwai N, Chaudhuri J. miR-182 is largely dispensable for adaptive immunity: lack of correlation between expression and function. Journal of Immunology (Baltimore, Md. : 1950). 194: 2635-42. PMID 25672759 DOI: 10.4049/Jimmunol.1402261  0.48
2014 Kumar R, DiMenna LJ, Chaudhuri J, Evans T. Biological function of activation-induced cytidine deaminase (AID). Biomedical Journal. 37: 269-83. PMID 25163501 DOI: 10.4103/2319-4170.128734  0.48
2014 Matthews AJ, Husain S, Chaudhuri J. Binding of AID to DNA does not correlate with mutator activity. Journal of Immunology (Baltimore, Md. : 1950). 193: 252-7. PMID 24879790 DOI: 10.4049/Jimmunol.1400433  0.48
2014 Vaidyanathan B, Yen WF, Pucella JN, Chaudhuri J. AIDing Chromatin and Transcription-Coupled Orchestration of Immunoglobulin Class-Switch Recombination. Frontiers in Immunology. 5: 120. PMID 24734031 DOI: 10.3389/Fimmu.2014.00120  0.48
2014 Matthews AJ, Zheng S, DiMenna LJ, Chaudhuri J. Regulation of immunoglobulin class-switch recombination: choreography of noncoding transcription, targeted DNA deamination, and long-range DNA repair. Advances in Immunology. 122: 1-57. PMID 24507154 DOI: 10.1016/B978-0-12-800267-4.00001-8  0.48
2013 Vuong BQ, Herrick-Reynolds K, Vaidyanathan B, Pucella JN, Ucher AJ, Donghia NM, Gu X, Nicolas L, Nowak U, Rahman N, Strout MP, Mills KD, Stavnezer J, Chaudhuri J. A DNA break- and phosphorylation-dependent positive feedback loop promotes immunoglobulin class-switch recombination. Nature Immunology. 14: 1183-9. PMID 24097111 DOI: 10.1038/Ni.2732  0.48
2013 Polkinghorn WR, Parker JS, Lee MX, Kass EM, Spratt DE, Iaquinta PJ, Arora VK, Yen WF, Cai L, Zheng D, Carver BS, Chen Y, Watson PA, Shah NP, Fujisawa S, ... Chaudhuri J, et al. Androgen receptor signaling regulates DNA repair in prostate cancers. Cancer Discovery. 3: 1245-53. PMID 24027196 DOI: 10.1158/2159-8290.Cd-13-0172  0.48
2013 Nicolás L, Chaudhuri J. 4C-ing the Igh Landscape. Immunity. 39: 199-201. PMID 23973215 DOI: 10.1016/J.Immuni.2013.08.014  0.48
2013 Kumar R, DiMenna L, Schrode N, Liu TC, Franck P, Muñoz-Descalzo S, Hadjantonakis AK, Zarrin AA, Chaudhuri J, Elemento O, Evans T. AID stabilizes stem-cell phenotype by removing epigenetic memory of pluripotency genes. Nature. 500: 89-92. PMID 23803762 DOI: 10.1038/Nature12299  0.48
2012 Vuong BQ, Chaudhuri J. Combinatorial mechanisms regulating AID-dependent DNA deamination: interacting proteins and post-translational modifications. Seminars in Immunology. 24: 264-72. PMID 22771392 DOI: 10.1016/J.Smim.2012.05.006  0.48
2011 Nowak U, Matthews AJ, Zheng S, Chaudhuri J. The splicing regulator PTBP2 interacts with the cytidine deaminase AID and promotes binding of AID to switch-region DNA. Nature Immunology. 12: 160-6. PMID 21186367 DOI: 10.1038/Ni.1977  0.48
2011 Lee-Theilen M, Matthews AJ, Kelly D, Zheng S, Chaudhuri J. CtIP promotes microhomology-mediated alternative end joining during class-switch recombination. Nature Structural & Molecular Biology. 18: 75-9. PMID 21131982 DOI: 10.1038/Nsmb.1942  0.48
2010 Lee-Theilen M, Chaudhuri J. Walking the AID tightrope. Nature Immunology. 11: 107-9. PMID 20084065 DOI: 10.1038/Ni0210-107  0.48
2009 Costanzo V, Chaudhuri J, Fung JC, Moran JV. Dealing with dangerous accidents: DNA double-strand breaks take centre stage. Symposium on Genome Instability and DNA Repair. Embo Reports. 10: 837-42. PMID 19609319 DOI: 10.1038/Embor.2009.173  0.48
2009 Basu U, Franklin A, Schwer B, Cheng HL, Chaudhuri J, Alt FW. Regulation of activation-induced cytidine deaminase DNA deamination activity in B-cells by Ser38 phosphorylation. Biochemical Society Transactions. 37: 561-8. PMID 19442251 DOI: 10.1042/Bst0370561  0.48
2009 Vuong BQ, Lee M, Kabir S, Irimia C, Macchiarulo S, McKnight GS, Chaudhuri J. Specific recruitment of protein kinase A to the immunoglobulin locus regulates class-switch recombination. Nature Immunology. 10: 420-6. PMID 19234474 DOI: 10.1038/Ni.1708  0.48
2009 Cheng HL, Vuong BQ, Basu U, Franklin A, Schwer B, Astarita J, Phan RT, Datta A, Manis J, Alt FW, Chaudhuri J. Integrity of the AID serine-38 phosphorylation site is critical for class switch recombination and somatic hypermutation in mice. Proceedings of the National Academy of Sciences of the United States of America. 106: 2717-22. PMID 19196992 DOI: 10.1073/Pnas.0812304106  0.48
2008 Suh WK, Chaudhuri J. Lymphocytes in action. Symposium on Lymphocyte Activation and Signalling. Embo Reports. 9: 841-6. PMID 18688253 DOI: 10.1038/Embor.2008.150  0.48
2008 Jabara HH, Chaudhuri J, Dutt S, Dedeoglu F, Weng Y, Murphy MM, Franco S, Alt FW, Manis J, Geha RS. B-cell receptor cross-linking delays activation-induced cytidine deaminase induction and inhibits class-switch recombination to IgE. The Journal of Allergy and Clinical Immunology. 121: 191-196.e2. PMID 17900678 DOI: 10.1016/j.jaci.2007.08.008  0.48
2007 Majumdar R, Chaudhuri J, Maitra U. Reconstitution of mammalian 48S ribosomal translation initiation complex. Methods in Enzymology. 430: 179-208. PMID 17913639 DOI: 10.1016/S0076-6879(07)30008-6  0.48
2007 Chaudhuri J, Basu U, Zarrin A, Yan C, Franco S, Perlot T, Vuong B, Wang J, Phan RT, Datta A, Manis J, Alt FW. Evolution of the immunoglobulin heavy chain class switch recombination mechanism. Advances in Immunology. 94: 157-214. PMID 17560275 DOI: 10.1016/S0065-2776(06)94006-1  0.48
2007 Fraenkel S, Mostoslavsky R, Novobrantseva TI, Pelanda R, Chaudhuri J, Esposito G, Jung S, Alt FW, Rajewsky K, Cedar H, Bergman Y. Allelic 'choice' governs somatic hypermutation in vivo at the immunoglobulin kappa-chain locus. Nature Immunology. 8: 715-22. PMID 17546032 DOI: 10.1038/Ni1476  0.48
2007 Basu U, Chaudhuri J, Phan RT, Datta A, Alt FW. Regulation of activation induced deaminase via phosphorylation. Advances in Experimental Medicine and Biology. 596: 129-37. PMID 17338181 DOI: 10.1007/0-387-46530-8_11  0.48
2005 Basu U, Chaudhuri J, Alpert C, Dutt S, Ranganath S, Li G, Schrum JP, Manis JP, Alt FW. The AID antibody diversification enzyme is regulated by protein kinase A phosphorylation. Nature. 438: 508-11. PMID 16251902 DOI: 10.1038/Nature04255  0.48
2005 Dudley DD, Chaudhuri J, Bassing CH, Alt FW. Mechanism and control of V(D)J recombination versus class switch recombination: similarities and differences. Advances in Immunology. 86: 43-112. PMID 15705419 DOI: 10.1016/S0065-2776(04)86002-4  0.48
2004 Zarrin AA, Alt FW, Chaudhuri J, Stokes N, Kaushal D, Du Pasquier L, Tian M. An evolutionarily conserved target motif for immunoglobulin class-switch recombination. Nature Immunology. 5: 1275-81. PMID 15531884 DOI: 10.1038/Ni1137  0.48
2002 Rooney S, Sekiguchi J, Zhu C, Cheng HL, Manis J, Whitlow S, DeVido J, Foy D, Chaudhuri J, Lombard D, Alt FW. Leaky Scid phenotype associated with defective V(D)J coding end processing in Artemis-deficient mice. Molecular Cell. 10: 1379-90. PMID 12504013 DOI: 10.1016/S1097-2765(02)00755-4  0.48
2000 Wong KK, Chang S, Weiler SR, Ganesan S, Chaudhuri J, Zhu C, Artandi SE, Rudolph KL, Gottlieb GJ, Chin L, Alt FW, DePinho RA. Telomere dysfunction impairs DNA repair and enhances sensitivity to ionizing radiation. Nature Genetics. 26: 85-8. PMID 10973255 DOI: 10.1038/79232  0.48
1999 Sekiguchi JM, Gao Y, Gu Y, Frank K, Sun Y, Chaudhuri J, Zhu C, Cheng HL, Manis J, Ferguson D, Davidson L, Greenberg ME, Alt FW. Nonhomologous end-joining proteins are required for V(D)J recombination, normal growth, and neurogenesis. Cold Spring Harbor Symposia On Quantitative Biology. 64: 169-81. PMID 11232282 DOI: 10.1101/Sqb.1999.64.169  0.48
1999 Chaudhuri J, Chowdhury D, Maitra U. Distinct functions of eukaryotic translation initiation factors eIF1A and eIF3 in the formation of the 40 S ribosomal preinitiation complex. The Journal of Biological Chemistry. 274: 17975-80. PMID 10364246 DOI: 10.1074/Jbc.274.25.17975  0.48
1998 Gao Y, Sun Y, Frank KM, Dikkes P, Fujiwara Y, Seidl KJ, Sekiguchi JM, Rathbun GA, Swat W, Wang J, Bronson RT, Malynn BA, Bryans M, Zhu C, Chaudhuri J, et al. A critical role for DNA end-joining proteins in both lymphogenesis and neurogenesis. Cell. 95: 891-902. PMID 9875844 DOI: 10.1016/S0092-8674(00)81714-6  0.48
1997 Si K, Chaudhuri J, Chevesich J, Maitra U. Molecular cloning and functional expression of a human cDNA encoding translation initiation factor 6. Proceedings of the National Academy of Sciences of the United States of America. 94: 14285-90. PMID 9405604 DOI: 10.1073/Pnas.94.26.14285  0.48
1997 Chaudhuri J, Chakrabarti A, Maitra U. Biochemical characterization of mammalian translation initiation factor 3 (eIF3). Molecular cloning reveals that p110 subunit is the mammalian homologue of Saccharomyces cerevisiae protein Prt1. The Journal of Biological Chemistry. 272: 30975-83. PMID 9388245 DOI: 10.1074/Jbc.272.49.30975  0.48
1997 Chaudhuri J, Si K, Maitra U. Function of eukaryotic translation initiation factor 1A (eIF1A) (formerly called eIF-4C) in initiation of protein synthesis. The Journal of Biological Chemistry. 272: 7883-91. PMID 9065455 DOI: 10.1074/Jbc.272.12.7883  0.48
1996 Farruggio D, Chaudhuri J, Maitra U, RajBhandary UL. The A1 x U72 base pair conserved in eukaryotic initiator tRNAs is important specifically for binding to the eukaryotic translation initiation factor eIF2. Molecular and Cellular Biology. 16: 4248-56. PMID 8754825 DOI: 10.1128/Mcb.16.8.4248  0.48
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