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Shuanghong Huo - Publications

Affiliations: 
Clark University, Worcester, MA, United States 
Area:
Biochemistry
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Liu H, Tan Q, Han L, Huo S. Observations on AMBER Force Field Performance under the Conditions of Low pH and High Salt Concentrations. The Journal of Physical Chemistry. B. PMID 28962533 DOI: 10.1021/Acs.Jpcb.7B07528  0.332
2016 Guan GQ, Zhao PX, Zhao J, Wang MJ, Huo SH, Cui FJ, Jiang JX. Production and Partial Characterization of an Alkaline Xylanase from a Novel Fungus Cladosporium oxysporum. Biomed Research International. 2016: 4575024. PMID 27213150 DOI: 10.1155/2016/4575024  0.35
2016 Liu H, Li M, Fan J, Huo S. Inherent structure versus geometric metric for state space discretization. Journal of Computational Chemistry. PMID 26915811 DOI: 10.1002/Jcc.24315  0.331
2016 Zhao J, Liu J, Wei T, Ma X, Cheng Q, Huo S, Zhang C, Zhang Y, Duan X, Liang XJ. Quercetin-loaded nanomicelles to circumvent human castration-resistant prostate cancer in vitro and in vivo. Nanoscale. PMID 26875690 DOI: 10.1039/C5Nr08966B  0.357
2015 Duan M, Liu H, Li M, Huo S. Network representation of conformational transitions between hidden intermediates of Rd-apocytochrome b562. The Journal of Chemical Physics. 143: 135101. PMID 26450332 DOI: 10.1063/1.4931921  0.351
2015 Zhai WH, Zhao J, Huo SP, Chen XG, Li YD, Zhang ZL, Yu LL, Song S, Wang QJ. Mechanisms of cytotoxicity induced by the anesthetic isoflurane: the role of inositol 1,4,5-trisphosphate receptors. Genetics and Molecular Research : Gmr. 14: 6929-6942. PMID 26125901 DOI: 10.4238/2015.June.26.1  0.349
2014 Zhang XD, Chen J, Luo Z, Wu D, Shen X, Song SS, Sun YM, Liu PX, Zhao J, Huo S, Fan S, Fan F, Liang XJ, Xie J. Enhanced tumor accumulation of sub-2 nm gold nanoclusters for cancer radiation therapy. Advanced Healthcare Materials. 3: 133-41. PMID 23873780 DOI: 10.1002/Adhm.201300189  0.349
2013 Wei T, Liu J, Ma H, Cheng Q, Huang Y, Zhao J, Huo S, Xue X, Liang Z, Liang XJ. Functionalized nanoscale micelles improve drug delivery for cancer therapy in vitro and in vivo. Nano Letters. 13: 2528-34. PMID 23634882 DOI: 10.1021/Nl400586T  0.356
2012 Duan M, Fan J, Huo S. Conformations of islet amyloid polypeptide monomers in a membrane environment: implications for fibril formation. Plos One. 7: e47150. PMID 23133593 DOI: 10.1371/Journal.Pone.0047150  0.371
2012 Liu H, Huo S. Effects of two solvent conditions on the free energy landscape of the BBL peripheral subunit binding domain. The Journal of Physical Chemistry. B. 116: 646-52. PMID 22126397 DOI: 10.1021/Jp209791A  0.324
2011 Yang H, Yu T, Sun C, Meng XH, Yu YJ, Huo SJ, Zhang JQ. Spectral-domain optical coherence tomography in patients with congenital nystagmus. International Journal of Ophthalmology. 4: 627-30. PMID 22553733 DOI: 10.3980/j.issn.2222-3959.2011.06.10  0.328
2011 Fan J, Duan M, Li DW, Wu H, Yang H, Han L, Huo S. Observation of two families of folding pathways of BBL. Biophysical Journal. 100: 2457-65. PMID 21575580 DOI: 10.1016/J.Bpj.2011.03.058  0.529
2008 Li DW, Mohanty S, Irbäck A, Huo S. Formation and growth of oligomers: a Monte Carlo study of an amyloid tau fragment. Plos Computational Biology. 4: e1000238. PMID 19057640 DOI: 10.1371/Journal.Pcbi.1000238  0.326
2008 Lim CC, Yang H, Yang M, Wang CK, Shi J, Berg EA, Pimentel DR, Gwathmey JK, Hajjar RJ, Helmes M, Costello CE, Huo S, Liao R. A novel mutant cardiac troponin C disrupts molecular motions critical for calcium binding affinity and cardiomyocyte contractility. Biophysical Journal. 94: 3577-89. PMID 18212018 DOI: 10.1529/Biophysj.107.112896  0.574
2008 Li DW, Yang H, Han L, Huo S. Predicting the folding pathway of engrailed homeodomain with a probabilistic roadmap enhanced reaction-path algorithm. Biophysical Journal. 94: 1622-9. PMID 18024496 DOI: 10.1529/Biophysj.107.119214  0.515
2008 Wang N, Sun C, Huo S, Zhang Y, Zhao J, Zhang S, Miao J. Cooperation of phosphatidylcholine-specific phospholipase C and basic fibroblast growth factor in the neural differentiation of mesenchymal stem cells in vitro. The International Journal of Biochemistry & Cell Biology. 40: 294-306. PMID 17890138 DOI: 10.1016/j.biocel.2007.08.003  0.347
2007 Yang H, Wu H, Li D, Han L, Huo S. Temperature-Dependent Probabilistic Roadmap Algorithm for Calculating Variationally Optimized Conformational Transition Pathways. Journal of Chemical Theory and Computation. 3: 17-25. PMID 26627147 DOI: 10.1021/Ct0502054  0.469
2007 Huo SM, Yang H, Deng AP. Development and validation of a highly sensitive ELISA for the determination of pharmaceutical indomethacin in water samples. Talanta. 73: 380-6. PMID 19073043 DOI: 10.1016/j.talanta.2007.03.055  0.362
2007 Li DW, Khanlarzadeh M, Wang J, Huo S, Brüschweiler R. Evaluation of configurational entropy methods from peptide folding-unfolding simulation. The Journal of Physical Chemistry. B. 111: 13807-13. PMID 18020439 DOI: 10.1021/Jp075220E  0.318
2007 Li DW, Han L, Huo S. Structural and pathway complexity of beta-strand reorganization within aggregates of human transthyretin(105-115) peptide. The Journal of Physical Chemistry. B. 111: 5425-33. PMID 17432900 DOI: 10.1021/Jp0703051  0.348
2007 Wang N, Xie K, Huo S, Zhao J, Zhang S, Miao J. Suppressing phosphatidylcholine-specific phospholipase C and elevating ROS level, NADPH oxidase activity and Rb level induced neuronal differentiation in mesenchymal stem cells. Journal of Cellular Biochemistry. 100: 1548-57. PMID 17211851 DOI: 10.1002/jcb.21139  0.36
2006 Yang M, Yordanov B, Levy Y, Brüschweiler R, Huo S. The sequence-dependent unfolding pathway plays a critical role in the amyloidogenicity of transthyretin. Biochemistry. 45: 11992-2002. PMID 17002298 DOI: 10.1021/Bi0609927  0.56
2006 Zhao J, Nelson DJ, Huo S. Potential influence of Asp in the Ca2+ coordination position 5 of parvalbumin on the calcium-binding affinity: a computational study. Journal of Inorganic Biochemistry. 100: 1879-87. PMID 16965819 DOI: 10.1016/J.Jinorgbio.2006.07.016  0.479
2006 Yang M, Lei M, Yordanov B, Huo S. Peptide plane can flip in two opposite directions: implication in amyloid formation of transthyretin. The Journal of Physical Chemistry. B. 110: 5829-33. PMID 16553385 DOI: 10.1021/Jp0570420  0.54
2005 Yang M, Lei M, Bruschweiler R, Huo S. Initial conformational changes of human transthyretin under partially denaturing conditions. Biophysical Journal. 89: 433-43. PMID 15821170 DOI: 10.1529/Biophysj.105.059642  0.548
2004 Lei M, Yang M, Huo S. Intrinsic versus mutation dependent instability/flexibility: a comparative analysis of the structure and dynamics of wild-type transthyretin and its pathogenic variants. Journal of Structural Biology. 148: 153-68. PMID 15477096 DOI: 10.1016/J.Jsb.2004.06.007  0.565
2003 Yang M, Lei M, Huo S. Why is Leu55-->Pro55 transthyretin variant the most amyloidogenic: insights from molecular dynamics simulations of transthyretin monomers. Protein Science : a Publication of the Protein Society. 12: 1222-31. PMID 12761393 DOI: 10.1110/Ps.0239703  0.57
2002 Straub JE, Guevara J, Huo S, Lee JP. Long time dynamic simulations: exploring the folding pathways of an Alzheimer's amyloid Abeta-peptide. Accounts of Chemical Research. 35: 473-81. PMID 12069633 DOI: 10.1021/Ar010031E  0.362
2002 Huo S, Massova I, Kollman PA. Computational alanine scanning of the 1:1 human growth hormone-receptor complex. Journal of Computational Chemistry. 23: 15-27. PMID 11913381 DOI: 10.1002/Jcc.1153  0.346
2002 Huo S, Wang J, Cieplak P, Kollman PA, Kuntz ID. Molecular dynamics and free energy analyses of cathepsin D-inhibitor interactions: insight into structure-based ligand design. Journal of Medicinal Chemistry. 45: 1412-9. PMID 11906282 DOI: 10.1021/Jm010338J  0.358
2000 Kollman PA, Massova I, Reyes C, Kuhn B, Huo S, Chong L, Lee M, Lee T, Duan Y, Wang W, Donini O, Cieplak P, Srinivasan J, Case DA, Cheatham TE. Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. Accounts of Chemical Research. 33: 889-97. PMID 11123888 DOI: 10.1021/Ar000033J  0.344
1997 Ma J, Huo S, Straub JE. Molecular dynamics simulation study of the B-states of solvated carbon monoxymyoglobin Journal of the American Chemical Society. 119: 2541-2551. DOI: 10.1021/Ja9608252  0.358
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