| Year |
Citation |
Score |
| 2023 |
Yang X, Liu Y, Yuan G, Weston DJ, Tuskan GA. Engineering Crassulacean Acid Metabolism in C and C Plants. Cold Spring Harbor Perspectives in Biology. PMID 38052496 DOI: 10.1101/cshperspect.a041674 |
0.316 |
|
| 2023 |
Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, ... ... Yang X, et al. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic Acids Research. PMID 37526283 DOI: 10.1093/nar/gkad616 |
0.335 |
|
| 2023 |
Yao T, Yuan G, Lu H, Liu Y, Zhang J, Tuskan GA, Muchero W, Chen JG, Yang X. CRISPR/Cas9-based gene activation and base editing in . Horticulture Research. 10: uhad085. PMID 37323227 DOI: 10.1093/hr/uhad085 |
0.314 |
|
| 2023 |
Yuan G, Lu H, De K, Hassan MM, Liu Y, Islam MT, Muchero W, Tuskan GA, Yang X. Split selectable marker systems utilizing inteins facilitate gene stacking in plants. Communications Biology. 6: 567. PMID 37237044 DOI: 10.1038/s42003-023-04950-8 |
0.326 |
|
| 2023 |
Yuan G, Tuskan GA, Yang X. Use of Fluorescent Protein Reporters for Assessing and Detecting Genome Editing Reagents and Transgene Expression in Plants. Methods in Molecular Biology (Clifton, N.J.). 2653: 115-127. PMID 36995623 DOI: 10.1007/978-1-0716-3131-7_8 |
0.317 |
|
| 2023 |
Liu Y, Yuan G, Hyden B, Tuskan GA, Abraham PE, Yang X. Expanding the application of anti-CRISPR proteins in plants for tunable genome editing. Plant Physiology. PMID 36757014 DOI: 10.1093/plphys/kiad076 |
0.309 |
|
| 2022 |
Liu Y, Yuan G, Hassan MM, Abraham PE, Mitchell JC, Jacobson D, Tuskan GA, Khakhar A, Medford J, Zhao C, Liu CJ, Eckert CA, Doktycz MJ, Tschaplinski TJ, Yang X. Biological and Molecular Components for Genetically Engineering Biosensors in Plants. Biodesign Research. 2022: 9863496. PMID 37850147 DOI: 10.34133/2022/9863496 |
0.324 |
|
| 2022 |
Hyden B, Yuan G, Liu Y, Smart LB, Tuskan GA, Yang X. Protoplast-Based Transient Expression and Gene Editing in Shrub Willow ( L.). Plants (Basel, Switzerland). 11. PMID 36559601 DOI: 10.3390/plants11243490 |
0.31 |
|
| 2022 |
Hu R, Zhang J, Jawdy S, Sreedasyam A, Lipzen A, Wang M, Ng V, Daum C, Keymanesh K, Liu D, Lu H, Ranjan P, Chen JG, Muchero W, Tschaplinski TJ, ... ... Yang X, et al. Comparative genomics analysis of drought response between obligate CAM and C photosynthesis plants. Journal of Plant Physiology. 277: 153791. PMID 36027837 DOI: 10.1016/j.jplph.2022.153791 |
0.351 |
|
| 2022 |
Yuan G, Lu H, De K, Hassan MM, Liu Y, Li Y, Muchero W, Abraham PE, Tuskan GA, Yang X. An Intein-Mediated Split-nCas9 System for Base Editing in Plants. Acs Synthetic Biology. PMID 35767601 DOI: 10.1021/acssynbio.1c00507 |
0.313 |
|
| 2022 |
Hassan MM, Yuan G, Liu Y, Alam M, Eckert CA, Tuskan GA, Golz JF, Yang X. Precision genome editing in plants using gene targeting and prime editing: Existing and emerging strategies. Biotechnology Journal. e2100673. PMID 35766313 DOI: 10.1002/biot.202100673 |
0.338 |
|
| 2022 |
Tan S, Liang Y, Huang Y, Xi J, Huang X, Yang X, Yi K. Phylogeny and Expression Atlas of the in Agave. Plants (Basel, Switzerland). 11. PMID 35684207 DOI: 10.3390/plants11111434 |
0.31 |
|
| 2022 |
Hu XL, Zhang J, Kaundal R, Kataria R, Labbé JL, Mitchell JC, Tschaplinski TJ, Tuskan GA, Cheng ZM, Yang X. Diversity and conservation of plant small secreted proteins associated with arbuscular mycorrhizal symbiosis. Horticulture Research. PMID 35184190 DOI: 10.1093/hr/uhac043 |
0.363 |
|
| 2021 |
Yang X, Liu D, Lu H, Weston DJ, Chen JG, Muchero W, Martin S, Liu Y, Hassan MM, Yuan G, Kalluri UC, Tschaplinski TJ, Mitchell JC, Wullschleger SD, Tuskan GA. Biological Parts for Plant Biodesign to Enhance Land-Based Carbon Dioxide Removal. Biodesign Research. 2021: 9798714. PMID 37849951 DOI: 10.34133/2021/9798714 |
0.309 |
|
| 2021 |
Yuan G, Lu H, Tang D, Hassan MM, Li Y, Chen JG, Tuskan GA, Yang X. Expanding the application of a UV-visible reporter for transient gene expression and stable transformation in plants. Horticulture Research. 8: 234. PMID 34719678 DOI: 10.1038/s41438-021-00663-3 |
0.313 |
|
| 2021 |
Wang J, Xu J, Yang X, Xu S, Zhang M, Lu F. Boosting power of transcriptomics by developing an efficient gene expression profiling approach. Plant Biotechnology Journal. PMID 34510693 DOI: 10.1111/pbi.13706 |
0.309 |
|
| 2021 |
Hu XL, Lu H, Hassan MM, Zhang J, Yuan G, Abraham PE, Shrestha HK, Villalobos Solis MI, Chen JG, Tschaplinski TJ, Doktycz MJ, Tuskan GA, Cheng ZM, Yang X. Advances and perspectives in discovery and functional analysis of small secreted proteins in plants. Horticulture Research. 8: 130. PMID 34059650 DOI: 10.1038/s41438-021-00570-7 |
0.37 |
|
| 2021 |
Liu D, Hu R, Zhang J, Guo HB, Cheng H, Li L, Borland AM, Qin H, Chen JG, Muchero W, Tuskan GA, Yang X. Overexpression of an Phosphopyruvate Carboxylase Improves Plant Growth and Stress Tolerance. Cells. 10. PMID 33800849 DOI: 10.3390/cells10030582 |
0.341 |
|
| 2020 |
Lu H, Yuan G, Strauss SH, Tschaplinski TJ, Tuskan GA, Chen JG, Yang X. Reconfiguring Plant Metabolism for Biodegradable Plastic Production. Biodesign Research. 2020: 9078303. PMID 37849903 DOI: 10.34133/2020/9078303 |
0.34 |
|
| 2020 |
Yuan G, Hassan MM, Liu D, Lim SD, Yim WC, Cushman JC, Markel K, Shih PM, Lu H, Weston DJ, Chen JG, Tschaplinski TJ, Tuskan GA, Yang X. Biosystems Design to Accelerate C-to-CAM Progression. Biodesign Research. 2020: 3686791. PMID 37849902 DOI: 10.34133/2020/3686791 |
0.306 |
|
| 2020 |
Yang X, Medford JI, Markel K, Shih PM, De Paoli HC, Trinh CT, McCormick AJ, Ployet R, Hussey SG, Myburg AA, Jensen PE, Hassan MM, Zhang J, Muchero W, Kalluri UC, et al. Plant Biosystems Design Research Roadmap 1.0. Biodesign Research. 2020: 8051764. PMID 37849899 DOI: 10.34133/2020/8051764 |
0.321 |
|
| 2020 |
Yang X, Cushman JC, Borland AM, Liu Q. Editorial: Systems Biology and Synthetic Biology in Relation to Drought Tolerance or Avoidance in Plants Frontiers in Plant Science. 11: 394. PMID 32328077 DOI: 10.3389/Fpls.2020.00394 |
0.388 |
|
| 2020 |
Zhang J, Hu R, Sreedasyam A, Garcia TM, Lipzen A, Wang M, Yerramsetty P, Liu D, Ng V, Schmutz J, Cushman JC, Borland AM, Pasha A, Provart NJ, Chen JG, ... ... Yang X, et al. Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism. Gigascience. 9. PMID 32135007 DOI: 10.1093/Gigascience/Giaa018 |
0.398 |
|
| 2019 |
Yang Y, Yoo CG, Rottmann W, Winkeler KA, Collins CM, Gunter LE, Jawdy SS, Yang X, Pu Y, Ragauskas AJ, Tuskan GA, Chen JG. PdWND3A, a wood-associated NAC domain-containing protein, affects lignin biosynthesis and composition in Populus. Bmc Plant Biology. 19: 486. PMID 31711424 DOI: 10.1186/S12870-019-2111-5 |
0.37 |
|
| 2019 |
Yang X, Liu D, Tschaplinski TJ, Tuskan GA. Comparative genomics can provide new insights into the evolutionary mechanisms and gene function in CAM plants. Journal of Experimental Botany. PMID 31616946 DOI: 10.1093/Jxb/Erz408 |
0.499 |
|
| 2019 |
Liu D, Chen M, Mendoza B, Cheng H, Hu R, Li L, Trinh CT, Tuskan GA, Yang X. CRISPR/Cas9-mediated Targeted Mutagenesis for Functional Genomics Research of Crassulacean Acid Metabolism Plants. Journal of Experimental Botany. PMID 31562521 DOI: 10.1093/Jxb/Erz415 |
0.464 |
|
| 2019 |
Zhang J, Xie M, Li M, Ding J, Pu Y, Bryan AC, Rottmann W, Winkeler KA, Collins CM, Singan V, Lindquist EA, Jawdy SS, Gunter LE, Engle NL, Yang X, et al. Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus. Plant Biotechnology Journal. PMID 31498543 DOI: 10.1111/Pbi.13254 |
0.459 |
|
| 2019 |
Labbé J, Muchero W, Czarnecki O, Wang J, Wang X, Bryan AC, Zheng K, Yang Y, Xie M, Zhang J, Wang D, Meidl P, Wang H, Morrell-Falvey JL, Cope KR, ... ... Yang X, et al. Mediation of plant-mycorrhizal interaction by a lectin receptor-like kinase. Nature Plants. 5: 676-680. PMID 31285560 DOI: 10.1038/S41477-019-0469-X |
0.381 |
|
| 2019 |
Yin H, Guo HB, Weston DJ, Borland AM, Ranjan P, Abraham PE, Jawdy SS, Wachira J, Tuskan GA, Tschaplinski TJ, Wullschleger SD, Guo H, Hettich RL, Gross SM, Wang Z, ... ... Yang X, et al. Correction to: Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave. Bmc Genomics. 20: 279. PMID 30971209 DOI: 10.1186/S12864-019-5663-8 |
0.369 |
|
| 2019 |
Mewalal R, Yin H, Hu R, Jawdy S, Vion P, Tuskan GA, Le Tacon F, Labbé JL, Yang X. Identification of Small RNAs Responsive to Mutualistic Interactions With Mycorrhizal Fungi, and . Frontiers in Microbiology. 10: 515. PMID 30936859 DOI: 10.3389/Fmicb.2019.00515 |
0.353 |
|
| 2019 |
Moseley RC, Tuskan GA, Yang X. Comparative Genomics Analysis Provides New Insight Into Molecular Basis of Stomatal Movement in . Frontiers in Plant Science. 10: 292. PMID 30930922 DOI: 10.3389/Fpls.2019.00292 |
0.438 |
|
| 2019 |
Chhetri HB, Macaya-Sanz D, Kainer D, Biswal AK, Evans LM, Chen JG, Collins C, Hunt K, Mohanty SS, Rosenstiel T, Ryno D, Winkeler K, Yang X, Jacobson D, Mohnen D, et al. Multi-trait genome-wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits. The New Phytologist. PMID 30843213 DOI: 10.1111/Nph.15777 |
0.351 |
|
| 2019 |
Tschaplinski TJ, Abraham PE, Jawdy SS, Gunter LE, Martin MZ, Engle NL, Yang X, Tuskan GA. The nature of the progression of drought stress drives differential metabolomic responses in Populus deltoides. Annals of Botany. PMID 30689716 DOI: 10.1093/Aob/Mcz002 |
0.311 |
|
| 2019 |
Zhang J, Li M, Bryan AC, Yoo CG, Rottmann W, Winkeler KA, Collins C, Singan V, Lindquist EA, Jawdy SS, Gunter LE, Engle NL, Yang X, Barry K, Tschaplinski TJ, et al. Overexpression of a serine hydroxymethyltransferase increases biomass production and reduces recalcitrance in the bioenergy crop Populus Sustainable Energy & Fuels. 3: 195-207. DOI: 10.1039/C8Se00471D |
0.401 |
|
| 2019 |
Wang X, Chen X, Cheng Q, Zhu K, Yang X, Cheng Z. Agrobacterium–mediated Transformation of Kalanchoe laxiflora Horticultural Plant Journal. 5: 221-228. DOI: 10.1016/J.Hpj.2019.07.001 |
0.422 |
|
| 2018 |
Badmi R, Payyavula RS, Bali G, Guo HB, Jawdy SS, Gunter LE, Yang X, Winkeler KA, Collins C, Rottmann WH, Yee K, Rodriguez M, Sykes RW, Decker SR, Davis MF, et al. A New Calmodulin-Binding Protein Expresses in the Context of Secondary Cell Wall Biosynthesis and Impacts Biomass Properties in . Frontiers in Plant Science. 9: 1669. PMID 30568662 DOI: 10.3389/Fpls.2018.01669 |
0.412 |
|
| 2018 |
Moseley RC, Mewalal R, Motta F, Tuskan GA, Haase S, Yang X. Conservation and Diversification of Circadian Rhythmicity Between a Model Crassulacean Acid Metabolism Plant and a Model C Photosynthesis Plant . Frontiers in Plant Science. 9: 1757. PMID 30546378 DOI: 10.3389/Fpls.2018.01757 |
0.446 |
|
| 2018 |
Yin H, Guo HB, Weston DJ, Borland AM, Ranjan P, Abraham PE, Jawdy SS, Wachira J, Tuskan GA, Tschaplinski TJ, Wullschleger SD, Guo H, Hettich RL, Gross SM, Wang Z, ... ... Yang X, et al. Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave. Bmc Genomics. 19: 588. PMID 30081833 DOI: 10.1186/S12864-018-4964-7 |
0.461 |
|
| 2018 |
Liu D, Palla KJ, Hu R, Moseley RC, Mendoza C, Chen M, Abraham PE, Labbé JL, Kalluri UC, Tschaplinski TJ, Cushman JC, Borland AM, Tuskan GA, Yang X. Perspectives on the basic and applied aspects of crassulacean acid metabolism (CAM) research. Plant Science : An International Journal of Experimental Plant Biology. 274: 394-401. PMID 30080627 DOI: 10.1016/J.Plantsci.2018.06.012 |
0.419 |
|
| 2018 |
Lim SD, Yim WC, Liu D, Hu R, Yang X, Cushman JC. A Vitis vinifera basic helix-loop-helix transcription factor enhances plant cell size, vegetative biomass, and reproductive yield. Plant Biotechnology Journal. PMID 29520945 DOI: 10.1111/Pbi.12898 |
0.418 |
|
| 2018 |
Abraham PE, Garcia BJ, Gunter LE, Jawdy SS, Engle N, Yang X, Jacobson DA, Hettich RL, Tuskan GA, Tschaplinski TJ. Quantitative proteome profile of water deficit stress responses in eastern cottonwood (Populus deltoides) leaves. Plos One. 13: e0190019. PMID 29447168 DOI: 10.1371/Journal.Pone.0190019 |
0.418 |
|
| 2018 |
Biswal AK, Atmodjo MA, Li M, Baxter HL, Yoo CG, Pu Y, Lee YC, Mazarei M, Black IM, Zhang JY, Ramanna H, Bray AL, King ZR, LaFayette PR, Pattathil S, ... ... Yang X, et al. Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis. Nature Biotechnology. PMID 29431741 DOI: 10.1038/Nbt.4067 |
0.343 |
|
| 2018 |
Biswal AK, Atmodjo MA, Pattathil S, Amos RA, Yang X, Winkeler K, Collins C, Mohanty SS, Ryno D, Tan L, Gelineo-Albersheim I, Hunt K, Sykes RW, Turner GB, Ziebell A, et al. Working towards recalcitrance mechanisms: increased xylan and homogalacturonan production by overexpression of GAlactUronosylTransferase12 (GAUT12) causes increased recalcitrance and decreased growth in Populus. Biotechnology For Biofuels. 11: 9. PMID 29371885 DOI: 10.1186/S13068-017-1002-Y |
0.4 |
|
| 2017 |
Yang Y, Yoo CG, Winkeler KA, Collins CM, Hinchee MAW, Jawdy SS, Gunter LE, Engle NL, Pu Y, Yang X, Tschaplinski TJ, Ragauskas AJ, Tuskan GA, Chen JG. Overexpression of a Domain of Unknown Function 231-containing protein increases O-xylan acetylation and cellulose biosynthesis in Populus. Biotechnology For Biofuels. 10: 311. PMID 29299061 DOI: 10.1186/S13068-017-0998-3 |
0.395 |
|
| 2017 |
Yang X, Hu R, Yin H, Jenkins J, Shu S, Tang H, Liu D, Weighill DA, Cheol Yim W, Ha J, Heyduk K, Goodstein DM, Guo HB, Moseley RC, Fitzek E, et al. The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism. Nature Communications. 8: 1899. PMID 29196618 DOI: 10.1038/S41467-017-01491-7 |
0.441 |
|
| 2017 |
Liu D, Mewalal R, Hu R, Tuskan GA, Yang X. New technologies accelerate the exploration of non-coding RNAs in horticultural plants. Horticulture Research. 4: 17031. PMID 28698797 DOI: 10.1038/Hortres.2017.31 |
0.43 |
|
| 2017 |
Yang Y, Yoo CG, Guo HB, Rottmann W, Winkeler KA, Collins CM, Gunter LE, Jawdy SS, Yang X, Guo H, Pu Y, Ragauskas AJ, Tuskan GA, Chen JG. Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus. Biotechnology For Biofuels. 10: 74. PMID 28344649 DOI: 10.1186/S13068-017-0760-X |
0.372 |
|
| 2017 |
Plett JM, Yin H, Mewalal R, Hu R, Li T, Ranjan P, Jawdy S, De Paoli HC, Butler G, Burch-Smith TM, Guo HB, Ju Chen C, Kohler A, Anderson IC, Labbé JL, ... ... Yang X, et al. Populus trichocarpa encodes small, effector-like secreted proteins that are highly induced during mutualistic symbiosis. Scientific Reports. 7: 382. PMID 28336910 DOI: 10.1038/S41598-017-00400-8 |
0.415 |
|
| 2017 |
Close D, Rodriguez M, Hu R, Yang X. Disposition and bioavailability of inulin and free sugar in untreated and dilute acid pretreated Agave tequilana leaves Biomass & Bioenergy. 106: 176-181. DOI: 10.1016/J.Biombioe.2017.08.032 |
0.364 |
|
| 2016 |
Abraham PE, Yin H, Borland AM, Weighill D, Lim SD, De Paoli HC, Engle N, Jones PC, Agh R, Weston DJ, Wullschleger SD, Tschaplinski T, Jacobson D, Cushman JC, Hettich RL, ... ... Yang X, et al. Transcript, protein and metabolite temporal dynamics in the CAM plant Agave. Nature Plants. 2: 16178. PMID 27869799 DOI: 10.1038/Nplants.2016.178 |
0.413 |
|
| 2016 |
Yang Y, Labbé J, Muchero W, Yang X, Jawdy SS, Kennedy M, Johnson J, Sreedasyam A, Schmutz J, Tuskan GA, Chen JG. Genome-wide analysis of lectin receptor-like kinases in Populus. Bmc Genomics. 17: 699. PMID 27580945 DOI: 10.1186/S12864-016-3026-2 |
0.363 |
|
| 2016 |
Borland AM, Guo HB, Yang X, Cushman JC. Orchestration of carbohydrate processing for crassulacean acid metabolism. Current Opinion in Plant Biology. 31: 118-124. PMID 27101569 DOI: 10.1016/J.Pbi.2016.04.001 |
0.387 |
|
| 2016 |
Bryan AC, Jawdy S, Gunter L, Gjersing E, Sykes R, Hinchee MA, Winkeler KA, Collins CM, Engle N, Tschaplinski TJ, Yang X, Tuskan GA, Muchero W, Chen JG. Knockdown of a laccase in Populus deltoides confers altered cell wall chemistry and increased sugar release. Plant Biotechnology Journal. PMID 26997157 DOI: 10.1111/Pbi.12560 |
0.393 |
|
| 2016 |
Liu D, Hu R, Palla KJ, Tuskan GA, Yang X. Advances and perspectives on the use of CRISPR/Cas9 systems in plant genomics research. Current Opinion in Plant Biology. 30: 70-77. PMID 26896588 DOI: 10.1016/J.Pbi.2016.01.007 |
0.475 |
|
| 2016 |
Czarnecki O, Bryan AC, Jawdy SS, Yang X, Cheng ZM, Chen JG, Tuskan GA. Simultaneous knockdown of six non-family genes using a single synthetic RNAi fragment in Arabidopsis thaliana. Plant Methods. 12: 16. PMID 26889205 DOI: 10.1186/S13007-016-0116-8 |
0.448 |
|
| 2016 |
Hamilton CE, Bever JD, Labbé J, Yang X, Yin H. Mitigating climate change through managing constructed-microbial communities in agriculture Agriculture, Ecosystems and Environment. 216: 304-308. DOI: 10.1016/J.Agee.2015.10.006 |
0.31 |
|
| 2015 |
Yang X, Leebens-Mack J, Chen F, Yin Y. Plant Comparative and Functional Genomics. International Journal of Genomics. 2015: 924369. PMID 26881194 DOI: 10.1155/2015/924369 |
0.501 |
|
| 2015 |
Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, ... ... Yang X, et al. The pineapple genome and the evolution of CAM photosynthesis. Nature Genetics. 47: 1435-42. PMID 26523774 DOI: 10.1038/Ng.3435 |
0.419 |
|
| 2015 |
Yang X, Cushman JC, Borland AM, Edwards EJ, Wullschleger SD, Tuskan GA, Owen NA, Griffiths H, Smith JA, De Paoli HC, Weston DJ, Cottingham R, Hartwell J, Davis SC, Silvera K, et al. A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world. The New Phytologist. 207: 491-504. PMID 26153373 DOI: 10.1111/Nph.13393 |
0.356 |
|
| 2015 |
Wang L, Hu W, Sun J, Liang X, Yang X, Wei S, Wang X, Zhou Y, Xiao Q, Yang G, He G. Genome-wide analysis of SnRK gene family in Brachypodium distachyon and functional characterization of BdSnRK2.9. Plant Science : An International Journal of Experimental Plant Biology. 237: 33-45. PMID 26089150 DOI: 10.1016/j.plantsci.2015.05.008 |
0.352 |
|
| 2015 |
Liu S, Hu Q, Luo S, Li Q, Yang X, Wang X, Wang S. Expression of wild-type PtrIAA14.1, a poplar Aux/IAA gene causes morphological changes in Arabidopsis. Frontiers in Plant Science. 6: 388. PMID 26082787 DOI: 10.3389/Fpls.2015.00388 |
0.32 |
|
| 2015 |
Guo L, Qiu J, Han Z, Ye Z, Chen C, Liu C, Xin X, Ye CY, Wang YY, Xie H, Wang Y, Bao J, Tang S, Xu J, Gui Y, ... ... Yang X, et al. A host plant genome (Zizania latifolia) after a century-long endophyte infection. The Plant Journal : For Cell and Molecular Biology. PMID 26072920 DOI: 10.1111/Tpj.12912 |
0.379 |
|
| 2015 |
Mielenz JR, Rodriguez M, Thompson OA, Yang X, Yin H. Development of Agave as a dedicated biomass source: production of biofuels from whole plants. Biotechnology For Biofuels. 8: 79. PMID 26056533 DOI: 10.1186/S13068-015-0261-8 |
0.379 |
|
| 2015 |
Cushman JC, Davis SC, Yang X, Borland AM. Development and use of bioenergy feedstocks for semi-arid and arid lands. Journal of Experimental Botany. 66: 4177-93. PMID 25873672 DOI: 10.1093/Jxb/Erv087 |
0.313 |
|
| 2015 |
Biswal AK, Hao Z, Pattathil S, Yang X, Winkeler K, Collins C, Mohanty SS, Richardson EA, Gelineo-Albersheim I, Hunt K, Ryno D, Sykes RW, Turner GB, Ziebell A, Gjersing E, et al. Downregulation of GAUT12 in Populus deltoides by RNA silencing results in reduced recalcitrance, increased growth and reduced xylan and pectin in a woody biofuel feedstock. Biotechnology For Biofuels. 8: 41. PMID 25802552 DOI: 10.1186/S13068-015-0218-Y |
0.367 |
|
| 2015 |
Borland AM, Wullschleger SD, Weston DJ, Hartwell J, Tuskan GA, Yang X, Cushman JC. Climate-resilient agroforestry: physiological responses to climate change and engineering of crassulacean acid metabolism (CAM) as a mitigation strategy. Plant, Cell & Environment. 38: 1833-49. PMID 25366937 DOI: 10.1111/Pce.12479 |
0.347 |
|
| 2014 |
Kalluri UC, Yin H, Yang X, Davison BH. Systems and synthetic biology approaches to alter plant cell walls and reduce biomass recalcitrance. Plant Biotechnology Journal. 12: 1207-16. PMID 25363806 DOI: 10.1111/Pbi.12283 |
0.467 |
|
| 2014 |
Myburg AA, Grattapaglia D, Tuskan GA, Hellsten U, Hayes RD, Grimwood J, Jenkins J, Lindquist E, Tice H, Bauer D, Goodstein DM, Dubchak I, Poliakov A, Mizrachi E, Kullan AR, ... ... Yang X, et al. The genome of Eucalyptus grandis. Nature. 510: 356-62. PMID 24919147 DOI: 10.1038/Nature13308 |
0.397 |
|
| 2014 |
Szövényi P, Devos N, Weston DJ, Yang X, Hock Z, Shaw JA, Shimizu KK, McDaniel SF, Wagner A. Efficient purging of deleterious mutations in plants with haploid selfing. Genome Biology and Evolution. 6: 1238-52. PMID 24879432 DOI: 10.1093/Gbe/Evu099 |
0.307 |
|
| 2014 |
DePaoli HC, Borland AM, Tuskan GA, Cushman JC, Yang X. Synthetic biology as it relates to CAM photosynthesis: challenges and opportunities Journal of Experimental Botany. 65: 3381-3393. PMID 24567493 DOI: 10.1093/Jxb/Eru038 |
0.4 |
|
| 2014 |
Borland AM, Hartwell J, Weston DJ, Schlauch KA, Tschaplinski TJ, Tuskan GA, Yang X, Cushman JC. Engineering crassulacean acid metabolism to improve water-use efficiency. Trends in Plant Science. 19: 327-38. PMID 24559590 DOI: 10.1016/J.Tplants.2014.01.006 |
0.411 |
|
| 2014 |
Yin H, Chen CJ, Yang J, Weston DJ, Chen JG, Muchero W, Ye N, Tschaplinski TJ, Wullschleger SD, Cheng ZM(, Tuskan GA, Yang X. Functional Genomics of Drought Tolerance in Bioenergy Crops Critical Reviews in Plant Sciences. 33: 205-224. DOI: 10.1080/07352689.2014.870417 |
0.434 |
|
| 2013 |
Chen S, Huang X, Yan X, Liang Y, Wang Y, Li X, Peng X, Ma X, Zhang L, Cai Y, Ma T, Cheng L, Qi D, Zheng H, Yang X, et al. Transcriptome analysis in sheepgrass (Leymus chinensis): a dominant perennial grass of the Eurasian Steppe. Plos One. 8: e67974. PMID 23861841 DOI: 10.1371/Journal.Pone.0067974 |
0.334 |
|
| 2013 |
Ye C, Yang X, Xia X, Yin W. Comparative analysis of cation/proton antiporter superfamily in plants. Gene. 521: 245-251. PMID 23562718 DOI: 10.1016/J.Gene.2013.03.104 |
0.376 |
|
| 2013 |
Ye C, Li T, Yin H, Weston DJ, Tuskan GA, Tschaplinski TJ, Yang X. Evolutionary analyses of non‐family genes in plants Plant Journal. 73: 788-797. PMID 23145488 DOI: 10.1111/Tpj.12073 |
0.406 |
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| 2012 |
Karve AA, Jawdy SS, Gunter LE, Allen SM, Yang X, Tuskan GA, Wullschleger SD, Weston DJ. Initial characterization of shade avoidance response suggests functional diversity between Populus phytochrome B genes. The New Phytologist. 196: 726-37. PMID 22943289 DOI: 10.1111/J.1469-8137.2012.04288.X |
0.33 |
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| 2012 |
Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, ... ... Yang X, et al. Reference genome sequence of the model plant Setaria. Nature Biotechnology. 30: 555-61. PMID 22580951 DOI: 10.1038/Nbt.2196 |
0.36 |
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| 2012 |
Weston DJ, Pelletier DA, Morrell-Falvey JL, Tschaplinski TJ, Jawdy SS, Lu TY, Allen SM, Melton SJ, Martin MZ, Schadt CW, Karve AA, Chen JG, Yang X, Doktycz MJ, Tuskan GA. Pseudomonas fluorescens induces strain-dependent and strain-independent host plant responses in defense networks, primary metabolism, photosynthesis, and fitness. Molecular Plant-Microbe Interactions : Mpmi. 25: 765-78. PMID 22375709 DOI: 10.1094/Mpmi-09-11-0253 |
0.368 |
|
| 2011 |
Ye C, Li T, Tuskan GA, Tschaplinski TJ, Yang X. Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis. Plant Science. 181: 688-695. PMID 21958711 DOI: 10.1016/J.Plantsci.2011.01.021 |
0.378 |
|
| 2011 |
Yang X, Ye C, Bisaria A, Tuskan GA, Kalluri UC. Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics Plant Science. 181: 675-687. PMID 21958710 DOI: 10.1016/J.Plantsci.2011.01.020 |
0.38 |
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| 2011 |
Weston DJ, Karve AA, Gunter LE, Jawdy SS, Yang X, Allen SM, Wullschleger SD. Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max. Plant, Cell & Environment. 34: 1488-506. PMID 21554326 DOI: 10.1111/J.1365-3040.2011.02347.X |
0.307 |
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| 2011 |
Guo J, Jin Z, Yang X, Li JF, Chen JG. Eukaryotic initiation factor 6, an evolutionarily conserved regulator of ribosome biogenesis and protein translation. Plant Signaling & Behavior. 6: 766-71. PMID 21543889 DOI: 10.4161/Psb.6.5.15438 |
0.445 |
|
| 2011 |
Cai B, Yang X, Tuskan GA, Cheng ZM. MicroSyn: a user friendly tool for detection of microsynteny in a gene family. Bmc Bioinformatics. 12: 79. PMID 21418570 DOI: 10.1186/1471-2105-12-79 |
0.312 |
|
| 2011 |
Yang X, Tschaplinski TJ, Hurst GB, Jawdy S, Abraham PE, Lankford PK, Adams RM, Shah MB, Hettich RL, Lindquist E, Kalluri UC, Gunter LE, Pennacchio C, Tuskan GA. Discovery and annotation of small proteins using genomics, proteomics, and computational approaches. Genome Research. 21: 634-41. PMID 21367939 DOI: 10.1101/Gr.109280.110 |
0.405 |
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| 2011 |
Yang X, Ye C, Cheng Z, Tschaplinski TJ, Wullschleger SD, Yin W, Xia X, Tuskan GA. Genomic aspects of research involving polyploid plants Plant Cell Tissue and Organ Culture. 104: 387-397. DOI: 10.1007/S11240-010-9826-1 |
0.439 |
|
| 2010 |
Tyler L, Bragg JN, Wu J, Yang X, Tuskan GA, Vogel JP. Annotation and comparative analysis of the glycoside hydrolase genes in Brachypodium distachyon. Bmc Genomics. 11: 600. PMID 20973991 DOI: 10.1186/1471-2164-11-600 |
0.469 |
|
| 2010 |
Ranjan P, Yin T, Zhang X, Kalluri UC, Yang X, Jawdy S, Tuskan GA. Bioinformatics-Based Identification of Candidate Genes from QTLs Associated with Cell Wall Traits in Populus Bioenergy Research. 3: 172-182. DOI: 10.1007/S12155-009-9060-Z |
0.443 |
|
| 2009 |
Xu Z, Zhang D, Hu J, Zhou X, Ye X, Reichel KL, Stewart NR, Syrenne RD, Yang X, Gao P, Shi W, Doeppke C, Sykes RW, Burris JN, Bozell JJ, et al. Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom. Bmc Bioinformatics. 10: S3. PMID 19811687 DOI: 10.1186/1471-2105-10-S11-S3 |
0.482 |
|
| 2009 |
Yang X, Jawdy S, Tschaplinski TJ, Tuskan GA. Genome-wide identification of lineage-specific genes in Arabidopsis, Oryza and Populus Genomics. 93: 473-480. PMID 19442640 DOI: 10.1016/J.Ygeno.2009.01.002 |
0.448 |
|
| 2009 |
Osburn LD, Yang X, Li Y, Cheng Z. Micropropagation of Japanese honeysuckle (Lonicera japonica) and Amur honeysuckle (L. maackii) by shoot tip culture. Journal of Environmental Horticulture. 27: 195-199. DOI: 10.24266/0738-2898-27.4.195 |
0.366 |
|
| 2009 |
Yang X, Kalluri UC, DiFazio SP, Wullschleger SD, Tschaplinski TJ, Cheng ZM, Tuskan GA. Poplar genomics: State of the science Critical Reviews in Plant Sciences. 28: 285-308. DOI: 10.1080/07352680903241014 |
0.376 |
|
| 2008 |
Yang X, Kalluri UC, Jawdy S, Gunter LE, Yin T, Tschaplinski TJ, Weston DJ, Ranjan P, Tuskan GA. The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants. Plant Physiology. 148: 1189-200. PMID 18775973 DOI: 10.1104/Pp.108.121921 |
0.432 |
|
| 2007 |
Yuan JS, Yang X, Lai J, Lin H, Cheng ZM, Nonogaki H, Chen F. The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar. Functional & Integrative Genomics. 7: 1-16. PMID 16897088 DOI: 10.1007/S10142-006-0034-3 |
0.376 |
|
| 2007 |
Yang X, Tuskan GA, Tschaplinski TJ, Cheng Z. Third-codon transversion rate-based Nymphaea basal angiosperm phylogeny—concordance with developmental evidence Nature Precedings. 2: 1-1. DOI: 10.1038/Npre.2007.320.1 |
0.377 |
|
| 2006 |
Yang X, Tuskan GA, Cheng Z. Divergence of the Dof Gene Families in Poplar, Arabidopsis, and Rice Suggests Multiple Modes of Gene Evolution after Duplication Plant Physiology. 142: 820-830. PMID 16980566 DOI: 10.1104/Pp.106.083642 |
0.4 |
|
| 2006 |
Yang X, Scheffler BE, Weston LA. Recent developments in primer design for DNA polymorphism and mRNA profiling in higher plants. Plant Methods. 2: 4. PMID 16509990 DOI: 10.1186/1746-4811-2-4 |
0.414 |
|
| 2006 |
Yang X, Scheffler BE, Weston LA. Recent Developments in Primer Design for DNA Markers in Higher Plants Hortscience. 41: 1006C-1006. DOI: 10.21273/Hortsci.41.4.1006C |
0.402 |
|
| 2004 |
Yang X, Scheffler BE, Weston LA. SOR1, a gene associated with bioherbicide production in sorghum root hairs. Journal of Experimental Botany. 55: 2251-9. PMID 15361534 DOI: 10.1093/Jxb/Erh252 |
0.35 |
|
| 2004 |
Yang X, Owens TG, Scheffler BE, Weston LA. Manipulation of root hair development and sorgoleone production in sorghum seedlings. Journal of Chemical Ecology. 30: 199-213. PMID 15074666 DOI: 10.1023/B:Joec.0000013191.35181.03 |
0.306 |
|
| 2003 |
Bertin C, Yang X, Weston LA. The role of root exudates and allelochemicals in the rhizosphere Plant and Soil. 256: 67-83. DOI: 10.1023/A:1026290508166 |
0.358 |
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