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Amy S. Gargis, Ph.D. - Publications

Affiliations: 
2010 Biological Sciences The University of Alabama, Tuscaloosa, AL 
Area:
Microbiology Biology
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14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Lutgring JD, Kent AG, Bowers JR, Jasso-Selles DE, Albrecht V, Stevens VA, Pfeiffer A, Barnes R, Engelthaler DM, Johnson JK, Gargis AS, Rasheed JK, Limbago BM, Elkins CA, Karlsson M, et al. Comparison of carbapenem-susceptible and carbapenem-resistant at nine sites in the USA, 2013-2016: a resource for antimicrobial resistance investigators. Microbial Genomics. 9. PMID 37987646 DOI: 10.1099/mgen.0.001119  0.355
2022 Gargis AS, Spicer LM, Kent AG, Zhu W, Campbell D, McAllister G, Ewing TO, Albrecht V, Stevens VA, Sheth M, Padilla J, Batra D, Johnson JK, Halpin AL, Rasheed JK, et al. Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States. Frontiers in Microbiology. 12: 807398. PMID 35178041 DOI: 10.3389/fmicb.2021.807398  0.342
2020 McLaughlin HP, Bugrysheva JV, Conley AB, Gulvik CA, Cherney B, Kolton CB, Marston CK, Saile E, Swaney E, Lonsway D, Gargis AS, Kongphet-Tran T, Lascols C, Michel P, Villanueva J, et al. Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness. Emerging Infectious Diseases. 26: 358-361. PMID 31961318 DOI: 10.3201/Eid2602.191351  0.413
2019 Gargis AS, Cherney B, Conley AB, McLaughlin HP, Sue D. Rapid Detection of Genetic Engineering, Structural Variation, and Antimicrobial Resistance Markers in Bacterial Biothreat Pathogens by Nanopore Sequencing. Scientific Reports. 9: 13501. PMID 31534162 DOI: 10.1038/S41598-019-49700-1  0.508
2019 Gargis AS, Lascols C, McLaughlin HP, Conley AB, Hoffmaster AR, Sue D. Genome Sequences of Penicillin-Resistant Bacillus anthracis Strains. Microbiology Resource Announcements. 8. PMID 30643874 DOI: 10.1128/MRA.01122-18  0.384
2019 Paulick A, Adamczyk M, Korhonen LC, Guh A, Gargis A, Karlsson M. 2404. Molecular Epidemiology of Clostridioides difficile in the United States, 2017 Open Forum Infectious Diseases. 6: S830-S830. DOI: 10.1093/Ofid/Ofz360.2082  0.312
2016 Gargis AS, Kalman L, Lubin IM. Assuring the Quality of Next-Generation Sequencing in Clinical Microbiology and Public Health Laboratories. Journal of Clinical Microbiology. PMID 27510831 DOI: 10.1128/Jcm.00949-16  0.314
2015 Gargis AS, Kalman L, Bick DP, da Silva C, Dimmock DP, Funke BH, Gowrisankar S, Hegde MR, Kulkarni S, Mason CE, Nagarajan R, Voelkerding KV, Worthey EA, Aziz N, Barnes J, et al. Good laboratory practice for clinical next-generation sequencing informatics pipelines. Nature Biotechnology. 33: 689-93. PMID 26154004 DOI: 10.1038/Nbt.3237  0.668
2013 Gargis AS, Heath LS, Heath HE, Leblanc PA, Gargis SR, Harris TH, Sloan GL. Complete nucleotide sequences of plasmids pACK2 and pACK5 from Staphylococcus simulans biovar staphylolyticus. Plasmid. 69: 257-62. PMID 23396145 DOI: 10.1016/J.Plasmid.2013.01.008  0.638
2012 Gargis AS, Kalman L, Berry MW, Bick DP, Dimmock DP, Hambuch T, Lu F, Lyon E, Voelkerding KV, Zehnbauer BA, Agarwala R, Bennett SF, Chen B, Chin EL, Compton JG, et al. Assuring the quality of next-generation sequencing in clinical laboratory practice. Nature Biotechnology. 30: 1033-6. PMID 23138292 DOI: 10.1038/Nbt.2403  0.43
2010 Gargis AS, Tate AH, Heath LS, Heath HE, Leblanc PA, Sloan GL. Complete nucleotide sequences of plasmids pACK1 and pACK3 from Staphylococcus simulans biovar staphylolyticus. Plasmid. 64: 104-9. PMID 20493903 DOI: 10.1016/J.Plasmid.2010.05.002  0.753
2009 Gargis AS, Heath LS, Heath HE, LeBlanc PA, Sloan GL. Characterization of pACK4, a mobilizable plasmid from Staphylococcus simulans biovar staphylolyticus. Plasmid. 62: 201-5. PMID 19715721 DOI: 10.1016/J.Plasmid.2009.08.003  0.734
2009 Gargis SR, Gargis AS, Heath HE, Heath LS, LeBlanc PA, Senn MM, Berger-Bächi B, Simmonds RS, Sloan GL. Zif, the zoocin A immunity factor, is a FemABX-like immunity protein with a novel mode of action. Applied and Environmental Microbiology. 75: 6205-10. PMID 19684178 DOI: 10.1128/Aem.01011-09  0.595
2009 Gargis AS, O'Rourke AL, Sloan GL, Simmonds RS. Prevalence and acquisition of the genes for zoocin A and zoocin A resistance in Streptococcus equi subsp. zooepidemicus. Journal of Molecular Evolution. 68: 498-505. PMID 19357799 DOI: 10.1007/S00239-009-9221-X  0.682
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