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Mingzhou Song, Ph.D. - Publications

Affiliations: 
2002 University of Washington, Seattle, Seattle, WA 
Area:
Electronics and Electrical Engineering, Computer Science, Biomedical Engineering
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhong H, Song M. Directional association test reveals high-quality putative cancer driver biomarkers including noncoding RNAs. Bmc Medical Genomics. 12: 129. PMID 31888644 DOI: 10.1186/S12920-019-0565-9  0.326
2018 Barchenger DW, Said JI, Zhang Y, Song M, Ortega FA, Ha Y, Kang B, Bosland PW. Genome-wide Identification of Chile Pepper Pentatricopeptide Repeat Domains Provides Insight into Fertility Restoration Journal of the American Society For Horticultural Science. 143: 418-429. DOI: 10.21273/Jashs04522-18  0.306
2015 Zhang Y, Liu ZL, Song M. ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion. Nucleic Acids Research. 43: 4393-407. PMID 25897127 DOI: 10.1093/Nar/Gkv358  0.32
2015 Ha T, Swanson D, Larouche M, Glenn R, Weeden D, Zhang P, Hamre K, Langston M, Phillips C, Song M, Ouyang Z, Chesler E, Duvvurru S, Yordanova R, Cui Y, et al. CbGRiTS: cerebellar gene regulation in time and space. Developmental Biology. 397: 18-30. PMID 25446528 DOI: 10.1016/J.Ydbio.2014.09.032  0.311
2014 Song M, Zhang Y, Katzaroff AJ, Edgar BA, Buttitta L. Hunting complex differential gene interaction patterns across molecular contexts. Nucleic Acids Research. 42: e57. PMID 24482443 DOI: 10.1093/Nar/Gku086  0.33
2011 Nguyen H, Song M. Integrated cellular and gene interaction modelling of pattern formation. International Journal of Computational Biology and Drug Design. 4: 361-72. PMID 22199036 DOI: 10.1504/Ijcbdd.2011.044444  0.319
2011 Ouyang Z, Song M, Güth R, Ha TJ, Larouche M, Goldowitz D. Conserved and differential gene interactions in dynamical biological systems. Bioinformatics (Oxford, England). 27: 2851-8. PMID 21840874 DOI: 10.1093/Bioinformatics/Btr472  0.333
2010 Song M, Haralick RM, Boissinot S. Efficient and exact maximum likelihood quantisation of genomic features using dynamic programming. International Journal of Data Mining and Bioinformatics. 4: 123-41. PMID 20423016 DOI: 10.1504/IJDMB.2010.032167  0.491
2010 Hong CC, Song M. Optimal in silico target gene deletion through nonlinear programming for genetic engineering. Plos One. 5: e9331. PMID 20195367 DOI: 10.1371/Journal.Pone.0009331  0.337
2009 Angeles JG, Ouyang Z, Aguirre AM, Lammers PJ, Song M. Identification of gene interactions in fungal-plant symbiosis through discrete dynamical system modelling. Iet Systems Biology. 3: 414-28. PMID 21028931 DOI: 10.1049/Iet-Syb.2008.0164  0.333
2009 Song M, Ouyang Z, Liu ZL. Discrete dynamical system modelling for gene regulatory networks of 5-hydroxymethylfurfural tolerance for ethanologenic yeast Iet Systems Biology. 3: 203-218. PMID 19449980 DOI: 10.1049/Iet-Syb.2008.0089  0.327
2009 Song MJ, Lewis CK, Lance ER, Chesler EJ, Yordanova RK, Langston MA, Lodowski KH, Bergeson SE. Reconstructing generalized logical networks of transcriptional regulation in mouse brain from temporal gene expression data. Eurasip Journal On Bioinformatics & Systems Biology. 545176. PMID 19300527 DOI: 10.1155/2009/545176  0.315
2007 Song M, Haralick RM, Boissinot S. Maximum likelihood quantization of genomic features using dynamic programming Proceedings - 6th International Conference On Machine Learning and Applications, Icmla 2007. 547-553. DOI: 10.1109/ICMLA.2007.72  0.494
2005 Song M, Haralick RM. Non-parametric pixel appearance probability model using grid quantization for local image information representation Medical Imaging Systems Technology: Volume 2: Modalities. 297-330. DOI: 10.1142/9789812701077_0010  0.495
2003 Song M, Boissinot S, Haralick RM, Phillips IT. Estimating recombination rate distribution by optimal quantization Proceedings of the 2003 Ieee Bioinformatics Conference, Csb 2003. 403-406. DOI: 10.1109/CSB.2003.1227346  0.446
2002 Song M, Haralick RM, Sheehan FH, Johnson RK. Integrated surface model optimization for freehand three-dimensional echocardiography. Ieee Transactions On Medical Imaging. 21: 1077-90. PMID 12564876 DOI: 10.1109/Tmi.2002.804433  0.518
2002 Song M, Haralick RM. Optimal multidimensional quantization for pattern recognition Proceedings of Spie - the International Society For Optical Engineering. 4875: 15-30. DOI: 10.1117/12.477142  0.474
2002 Song M, Haralick RM, Sheehan FH, Johnson RK. An integrated approach to surface modeling in freehand three-dimensional echocardiography Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 2: 1082-1083.  0.476
2000 Song M, Haralick RM, Sheehan FH. Ultrasound imaging simulation and echocardiographic image synthesis Ieee International Conference On Image Processing. 3.  0.42
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