| Year |
Citation |
Score |
| 2023 |
Singh P, Gazy I, Kupiec M. Control of telomere length in yeast by SUMOylated PCNA and the Elg1 PCNA unloader. Elife. 12. PMID 37530521 DOI: 10.7554/eLife.86990 |
0.356 |
|
| 2023 |
Itzkovich Z, Choudhary K, Arbel M, Kupiec M. Effects of Defective Unloading and Recycling of PCNA Revealed by the Analysis of Mutants. International Journal of Molecular Sciences. 24. PMID 36675081 DOI: 10.3390/ijms24021568 |
0.383 |
|
| 2022 |
Peretz I, Kupiec M, Sharan R. A comparative analysis of telomere length maintenance circuits in fission and budding yeast. Frontiers in Genetics. 13: 1033113. PMID 36406126 DOI: 10.3389/fgene.2022.1033113 |
0.343 |
|
| 2022 |
Choudhary K, Kupiec M. The cohesin complex of yeasts: sister chromatid cohesion and beyond. Fems Microbiology Reviews. PMID 36370456 DOI: 10.1093/femsre/fuac045 |
0.35 |
|
| 2022 |
Choudhary K, Itzkovich Z, Alonso-Perez E, Bishara H, Dunn B, Sherlock G, Kupiec M. S. cerevisiae Cells Can Grow without the Pds5 Cohesin Subunit. Mbio. e0142022. PMID 35708277 DOI: 10.1128/mbio.01420-22 |
0.423 |
|
| 2022 |
Cohen A, Pataki E, Kupiec M, Weisman R. TOR complex 2 contributes to regulation of gene expression via inhibiting Gcn5 recruitment to subtelomeric and DNA replication stress genes. Plos Genetics. 18: e1010061. PMID 35157728 DOI: 10.1371/journal.pgen.1010061 |
0.346 |
|
| 2022 |
Li L, Wang J, Yang Z, Zhao Y, Jiang H, Jiang L, Hou W, Ye R, He Q, Kupiec M, Luke B, Cao Q, Qi Z, Li Z, Lou H. Metabolic remodeling maintains a reducing environment for rapid activation of the yeast DNA replication checkpoint. The Embo Journal. e108290. PMID 35028974 DOI: 10.15252/embj.2021108290 |
0.311 |
|
| 2021 |
Arbel M, Choudhary K, Tfilin O, Kupiec M. PCNA Loaders and Unloaders-One Ring That Rules Them All. Genes. 12. PMID 34828416 DOI: 10.3390/genes12111812 |
0.316 |
|
| 2020 |
Arbel M, Liefshitz B, Kupiec M. DNA damage bypass pathways and their effect on mutagenesis in yeast. Fems Microbiology Reviews. PMID 32840566 DOI: 10.1093/Femsre/Fuaa038 |
0.39 |
|
| 2020 |
Arbel M, Liefshitz B, Kupiec M. How yeast cells deal with stalled replication forks. Current Genetics. 66: 911-915. PMID 32394094 DOI: 10.1007/S00294-020-01082-Y |
0.421 |
|
| 2020 |
Harari Y, Gershon L, Alonso-Perez E, Klein S, Berneman Y, Choudhari K, Singh P, Sau S, Liefshitz B, Kupiec M. Telomeres and stress in yeast cells: When genes and environment interact. Fungal Biology. 124: 311-315. PMID 32389293 DOI: 10.1016/J.Funbio.2019.09.003 |
0.495 |
|
| 2020 |
Arbel M, Bronstein A, Sau S, Liefshitz B, Kupiec M. Access to PCNA by Srs2 and Elg1 Controls the Choice between Alternative Repair Pathways in Saccharomyces cerevisiae. Mbio. 11. PMID 32371600 DOI: 10.1128/Mbio.00705-20 |
0.422 |
|
| 2019 |
Reidman S, Cohen A, Kupiec M, Weisman R. The cytosolic form of aspartate aminotransferase is required for full activation of TOR complex 1 in fission yeast. The Journal of Biological Chemistry. PMID 31641022 DOI: 10.1074/Jbc.Ra119.010101 |
0.309 |
|
| 2019 |
Puddu F, Herzog M, Selivanova A, Wang S, Zhu J, Klein-Lavi S, Gordon M, Meirman R, Millan-Zambrano G, Ayestaran I, Salguero I, Sharan R, Li R, Kupiec M, Jackson SP. Genome architecture and stability in the Saccharomyces cerevisiae knockout collection. Nature. PMID 31511699 DOI: 10.1038/S41586-019-1549-9 |
0.421 |
|
| 2019 |
Sau S, Kupiec M. A role for the yeast PCNA unloader Elg1 in eliciting the DNA damage checkpoint. Current Genetics. PMID 31332476 DOI: 10.1007/S00294-019-01020-7 |
0.391 |
|
| 2019 |
Sau S, Liefshitz B, Kupiec M. The Yeast PCNA Unloader Elg1 RFC-Like Complex Plays a Role in Eliciting the DNA Damage Checkpoint. Mbio. 10. PMID 31186330 DOI: 10.1128/Mbio.01159-19 |
0.45 |
|
| 2018 |
Bronstein A, Gershon L, Grinberg G, Alonso-Perez E, Kupiec M. The Main Role of Srs2 in DNA Repair Depends on Its Helicase Activity, Rather than on Its Interactions with PCNA or Rad51. Mbio. 9. PMID 30018112 DOI: 10.1128/Mbio.01192-18 |
0.448 |
|
| 2018 |
Cohen A, Habib A, Laor D, Yadav S, Kupiec M, Weisman R. TOR complex 2 in fission yeast is required for chromatin-mediated gene silencing and assembly of heterochromatic domains at subtelomeres. The Journal of Biological Chemistry. PMID 29632066 DOI: 10.1074/Jbc.Ra118.002270 |
0.375 |
|
| 2018 |
Bronstein A, Bramson S, Shemesh K, Liefshitz B, Kupiec M. Tight Regulation of Srs2 Helicase Activity Is Crucial for Proper Functioning of DNA Repair Mechanisms. G3 (Bethesda, Md.). 8: 1615-1626. PMID 29531123 DOI: 10.1534/G3.118.200181 |
0.459 |
|
| 2018 |
Harari Y, Ram Y, Kupiec M. Frequent ploidy changes in growing yeast cultures. Current Genetics. 64: 1001-1004. PMID 29525927 DOI: 10.1007/S00294-018-0823-Y |
0.37 |
|
| 2018 |
Biran H, Almozlino T, Kupiec M, Sharan R. WebPropagate: A Web Server for Network Propagation. Journal of Molecular Biology. 430: 2231-2236. PMID 29524510 DOI: 10.1016/J.Jmb.2018.02.025 |
0.301 |
|
| 2018 |
Harari Y, Ram Y, Rappoport N, Hadany L, Kupiec M. Spontaneous Changes in Ploidy Are Common in Yeast. Current Biology : Cb. 28: 825-835.e4. PMID 29502947 DOI: 10.1016/J.Cub.2018.01.062 |
0.376 |
|
| 2018 |
Janke R, King GA, Kupiec M, Rine J. Pivotal roles of PCNA loading and unloading in heterochromatin function. Proceedings of the National Academy of Sciences of the United States of America. PMID 29440488 DOI: 10.1073/Pnas.1721573115 |
0.394 |
|
| 2018 |
Diament A, Feldman A, Schochet E, Kupiec M, Arava Y, Tuller T. The extent of ribosome queuing in budding yeast. Plos Computational Biology. 14: e1005951. PMID 29377894 DOI: 10.1371/Journal.Pcbi.1005951 |
0.36 |
|
| 2018 |
Simpson-Lavy K, Kupiec M. A reversible liquid drop aggregation controls glucose response in yeast. Current Genetics. 64: 785-788. PMID 29322248 DOI: 10.1007/S00294-018-0805-0 |
0.308 |
|
| 2018 |
Maicher A, Kupiec M. Rnr1's role in telomere elongation cannot be replaced by Rnr3: a role beyond dNTPs? Current Genetics. 64: 547-550. PMID 29119271 DOI: 10.1007/S00294-017-0779-3 |
0.432 |
|
| 2018 |
Galán A, García-Oliver E, Nuño-Cabanes C, Rubinstein L, Kupiec M, Rodríguez-Navarro S. The evolutionarily conserved factor Sus1/ENY2 plays a role in telomere length maintenance. Current Genetics. 64: 635-644. PMID 29116388 DOI: 10.1007/S00294-017-0778-4 |
0.433 |
|
| 2018 |
Harari Y, Kupiec M. Do long telomeres affect cellular fitness? Current Genetics. 64: 173-176. PMID 28887594 DOI: 10.1007/S00294-017-0746-Z |
0.386 |
|
| 2018 |
Harari Y, Kupiec M. Mec1 is needed for extensive telomere elongation in response to ethanol in yeast. Current Genetics. 64: 223-234. PMID 28780613 DOI: 10.1007/S00294-017-0728-1 |
0.372 |
|
| 2017 |
Simpson-Lavy K, Xu T, Johnston M, Kupiec M. The Std1 Activator of the Snf1/AMPK Kinase Controls Glucose Response in Yeast by a Regulated Protein Aggregation. Molecular Cell. 68: 1120-1133.e3. PMID 29249654 DOI: 10.1016/J.Molcel.2017.11.016 |
0.321 |
|
| 2017 |
Maicher A, Gazy I, Sharma S, Marjavaara L, Grinberg G, Shemesh K, Chabes A, Kupiec M. Rnr1, but not Rnr3, facilitates the sustained telomerase-dependent elongation of telomeres. Plos Genetics. 13: e1007082. PMID 29069086 DOI: 10.1371/Journal.Pgen.1007082 |
0.42 |
|
| 2017 |
Harari Y, Zadok-Laviel S, Kupiec M. Long Telomeres Do Not Affect Cellular Fitness in Yeast. Mbio. 8. PMID 28851852 DOI: 10.1128/Mbio.01314-17 |
0.396 |
|
| 2017 |
Lev I, Shemesh K, Volpe M, Sau S, Levinton N, Molco M, Singh S, Liefshitz B, Ben Aroya S, Kupiec M. A New Method, "Reverse Yeast Two Hybrid Array (RYTHA)," Identifies Mutants That Dissociate the Physical Interaction Between Elg1 and Slx5. Genetics. PMID 28476868 DOI: 10.1534/Genetics.117.200451 |
0.428 |
|
| 2017 |
Shemesh K, Sebesta M, Pacesa M, Sau S, Bronstein A, Parnas O, Liefshitz B, Venclovas C, Krejci L, Kupiec M. A structure-function analysis of the yeast Elg1 protein reveals the importance of PCNA unloading in genome stability maintenance. Nucleic Acids Research. 45: 3189-3203. PMID 28108661 DOI: 10.1093/Nar/Gkw1348 |
0.456 |
|
| 2017 |
Attali I, Tobelaim WS, Persaud A, Motamedchaboki K, Simpson-Lavy KJ, Mashahreh B, Levin-Kravets O, Keren-Kaplan T, Pilzer I, Kupiec M, Wiener R, Wolf DA, Rotin D, Prag G. Ubiquitylation-dependent oligomerization regulates activity of Nedd4 ligases. The Embo Journal. PMID 28069708 DOI: 10.15252/Embj.201694314 |
0.308 |
|
| 2016 |
Dieckmann AK, Babin V, Harari Y, Eils R, König R, Luke B, Kupiec M. Role of the ESCRT Complexes in Telomere Biology. Mbio. 7. PMID 27834202 DOI: 10.1128/Mbio.01793-16 |
0.454 |
|
| 2016 |
Kupiec M. Alternative clamp loaders/unloaders. Fems Yeast Research. 16. PMID 27664980 DOI: 10.1093/Femsyr/Fow084 |
0.414 |
|
| 2016 |
Silberberg Y, Kupiec M, Sharan R. Utilizing yeast chemogenomic profiles for the prediction of pharmacogenomic associations in humans. Scientific Reports. 6: 23703. PMID 27025271 DOI: 10.1038/Srep23703 |
0.301 |
|
| 2016 |
Cohen A, Kupiec M, Weisman R. TORC2-Gad8 is found in the nucleus where it interacts with the MBF transcriptional complex to regulate the response to DNA replication stress. The Journal of Biological Chemistry. PMID 26912660 DOI: 10.1074/Jbc.M115.705251 |
0.418 |
|
| 2016 |
Poos AM, Maicher A, Dieckmann AK, Oswald M, Eils R, Kupiec M, Luke B, König R. Mixed Integer Linear Programming based machine learning approach identifies regulators of telomerase in yeast. Nucleic Acids Research. 44: e93. PMID 26908654 DOI: 10.1093/Nar/Gkw111 |
0.355 |
|
| 2015 |
Atias N, Kupiec M, Sharan R. Systematic identification and correction of annotation errors in the genetic interaction map of Saccharomyces cerevisiae. Nucleic Acids Research. PMID 26602688 DOI: 10.1093/Nar/Gkv1284 |
0.388 |
|
| 2015 |
Simpson-Lavy KJ, Bronstein A, Kupiec M, Johnston M. Cross-Talk between Carbon Metabolism and the DNA Damage Response in S. cerevisiae. Cell Reports. 12: 1865-75. PMID 26344768 DOI: 10.1016/J.Celrep.2015.08.025 |
0.412 |
|
| 2015 |
Shkedy D, Singh N, Shemesh K, Amir A, Geiger T, Liefshitz B, Harari Y, Kupiec M. Regulation of Elg1 activity by phosphorylation. Cell Cycle (Georgetown, Tex.). 0. PMID 26177013 DOI: 10.1080/15384101.2015.1068475 |
0.452 |
|
| 2015 |
Laor D, Cohen A, Kupiec M, Weisman R. TORC1 Regulates Developmental Responses to Nitrogen Stress via Regulation of the GATA Transcription Factor Gaf1. Mbio. 6: e00959. PMID 26152587 DOI: 10.1128/Mbio.00959-15 |
0.322 |
|
| 2015 |
Gazy I, Liefshitz B, Parnas O, Kupiec M. Elg1, a central player in genome stability. Mutation Research. Reviews in Mutation Research. 763: 267-79. PMID 25795125 DOI: 10.1016/J.Mrrev.2014.11.007 |
0.445 |
|
| 2015 |
Uziel O, Yosef N, Sharan R, Ruppin E, Kupiec M, Kushnir M, Beery E, Cohen-Diker T, Nordenberg J, Lahav M. The effects of telomere shortening on cancer cells: a network model of proteomic and microRNA analysis. Genomics. 105: 5-16. PMID 25451739 DOI: 10.1016/J.Ygeno.2014.10.013 |
0.404 |
|
| 2014 |
Harari Y, Kupiec M. Genome-wide studies of telomere biology in budding yeast. Microbial Cell (Graz, Austria). 1: 70-80. PMID 28357225 DOI: 10.15698/Mic2014.01.132 |
0.462 |
|
| 2014 |
Kupiec M. Biology of telomeres: lessons from budding yeast. Fems Microbiology Reviews. 38: 144-71. PMID 24754043 DOI: 10.1111/1574-6976.12054 |
0.434 |
|
| 2014 |
Rubinstein L, Ungar L, Harari Y, Babin V, Ben-Aroya S, Merenyi G, Marjavaara L, Chabes A, Kupiec M. Telomere length kinetics assay (TELKA) sorts the telomere length maintenance (tlm) mutants into functional groups. Nucleic Acids Research. 42: 6314-25. PMID 24728996 DOI: 10.1093/Nar/Gku267 |
0.441 |
|
| 2014 |
Shahar OD, Kalousi A, Eini L, Fisher B, Weiss A, Darr J, Mazina O, Bramson S, Kupiec M, Eden A, Meshorer E, Mazin AV, Brino L, Goldberg M, Soutoglou E. A high-throughput chemical screen with FDA approved drugs reveals that the antihypertensive drug Spironolactone impairs cancer cell survival by inhibiting homology directed repair. Nucleic Acids Research. 42: 5689-701. PMID 24682826 DOI: 10.1093/Nar/Gku217 |
0.356 |
|
| 2014 |
Laor D, Cohen A, Pasmanik-Chor M, Oron-Karni V, Kupiec M, Weisman R. Isp7 is a novel regulator of amino acid uptake in the TOR signaling pathway. Molecular and Cellular Biology. 34: 794-806. PMID 24344203 DOI: 10.1128/Mcb.01473-13 |
0.364 |
|
| 2013 |
Gazy I, Kupiec M. Genomic instability and repair mediated by common repeated sequences. Proceedings of the National Academy of Sciences of the United States of America. 110: 19664-5. PMID 24262150 DOI: 10.1073/Pnas.1320030110 |
0.4 |
|
| 2013 |
Harari Y, Romano GH, Ungar L, Kupiec M. Nature vs nurture: interplay between the genetic control of telomere length and environmental factors. Cell Cycle (Georgetown, Tex.). 12: 3465-70. PMID 24091626 DOI: 10.4161/Cc.26625 |
0.419 |
|
| 2013 |
Romano GH, Harari Y, Yehuda T, Podhorzer A, Rubinstein L, Shamir R, Gottlieb A, Silberberg Y, Pe'er D, Ruppin E, Sharan R, Kupiec M. Environmental stresses disrupt telomere length homeostasis. Plos Genetics. 9: e1003721. PMID 24039592 DOI: 10.1371/Journal.Pgen.1003721 |
0.35 |
|
| 2013 |
Gazy I, Liefshitz B, Bronstein A, Parnas O, Atias N, Sharan R, Kupiec M. A genetic screen for high copy number suppressors of the synthetic lethality between elg1Δ and srs2Δ in yeast. G3 (Bethesda, Md.). 3: 917-26. PMID 23704284 DOI: 10.1534/G3.113.005561 |
0.481 |
|
| 2013 |
Schonbrun M, Kolesnikov M, Kupiec M, Weisman R. TORC2 is required to maintain genome stability during S phase in fission yeast. The Journal of Biological Chemistry. 288: 19649-60. PMID 23703609 DOI: 10.1074/Jbc.M113.464974 |
0.457 |
|
| 2013 |
Agmon N, Liefshitz B, Zimmer C, Fabre E, Kupiec M. Effect of nuclear architecture on the efficiency of double-strand break repair. Nature Cell Biology. 15: 694-9. PMID 23644470 DOI: 10.1038/Ncb2745 |
0.435 |
|
| 2013 |
Singh S, Shemesh K, Liefshitz B, Kupiec M. Genetic and physical interactions between the yeast ELG1 gene and orthologs of the Fanconi anemia pathway. Cell Cycle (Georgetown, Tex.). 12: 1625-36. PMID 23624835 DOI: 10.4161/Cc.24756 |
0.425 |
|
| 2012 |
Yona AH, Manor YS, Herbst RH, Romano GH, Mitchell A, Kupiec M, Pilpel Y, Dahan O. Chromosomal duplication is a transient evolutionary solution to stress. Proceedings of the National Academy of Sciences of the United States of America. 109: 21010-5. PMID 23197825 DOI: 10.1073/Pnas.1211150109 |
0.336 |
|
| 2012 |
Mazón G, Lam AF, Ho CK, Kupiec M, Symington LS. The Rad1-Rad10 nuclease promotes chromosome translocations between dispersed repeats. Nature Structural & Molecular Biology. 19: 964-71. PMID 22885325 DOI: 10.1038/Nsmb.2359 |
0.432 |
|
| 2012 |
Gazy I, Kupiec M. The importance of being modified: PCNA modification and DNA damage response. Cell Cycle (Georgetown, Tex.). 11: 2620-3. PMID 22732495 DOI: 10.4161/Cc.20626 |
0.412 |
|
| 2012 |
Kupiec M, Weisman R. TOR links starvation responses to telomere length maintenance. Cell Cycle (Georgetown, Tex.). 11: 2268-71. PMID 22617386 DOI: 10.4161/Cc.20401 |
0.387 |
|
| 2012 |
Dominissini D, Moshitch-Moshkovitz S, Schwartz S, Salmon-Divon M, Ungar L, Osenberg S, Cesarkas K, Jacob-Hirsch J, Amariglio N, Kupiec M, Sorek R, Rechavi G. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature. 485: 201-6. PMID 22575960 DOI: 10.1038/Nature11112 |
0.326 |
|
| 2012 |
Ben-Shitrit T, Yosef N, Shemesh K, Sharan R, Ruppin E, Kupiec M. Systematic identification of gene annotation errors in the widely used yeast mutation collections. Nature Methods. 9: 373-8. PMID 22306811 DOI: 10.1038/Nmeth.1890 |
0.362 |
|
| 2011 |
Harari Y, Rubinstein L, Kupiec M. An anti-checkpoint activity for rif1. Plos Genetics. 7: e1002421. PMID 22194704 DOI: 10.1371/Journal.Pgen.1002421 |
0.478 |
|
| 2011 |
Ungar L, Harari Y, Toren A, Kupiec M. Tor complex 1 controls telomere length by affecting the level of Ku. Current Biology : Cb. 21: 2115-20. PMID 22169538 DOI: 10.1016/J.Cub.2011.11.024 |
0.44 |
|
| 2011 |
Tuller T, Veksler-Lublinsky I, Gazit N, Kupiec M, Ruppin E, Ziv-Ukelson M. Composite effects of gene determinants on the translation speed and density of ribosomes. Genome Biology. 12: R110. PMID 22050731 DOI: 10.1186/Gb-2011-12-11-R110 |
0.345 |
|
| 2011 |
Reuveni S, Meilijson I, Kupiec M, Ruppin E, Tuller T. Genome-scale analysis of translation elongation with a ribosome flow model. Plos Computational Biology. 7: e1002127. PMID 21909250 DOI: 10.1371/Journal.Pcbi.1002127 |
0.347 |
|
| 2011 |
Parnas O, Amishay R, Liefshitz B, Zipin-Roitman A, Kupiec M. Elg1, the major subunit of an alternative RFC complex, interacts with SUMO-processing proteins. Cell Cycle (Georgetown, Tex.). 10: 2894-903. PMID 21869594 DOI: 10.4161/Cc.10.17.16778 |
0.423 |
|
| 2011 |
Liefshitz B, Kupiec M. Roles of RSC, Rad59, and cohesin in double-strand break repair. Molecular and Cellular Biology. 31: 3921-3. PMID 21844225 DOI: 10.1128/Mcb.05974-11 |
0.363 |
|
| 2011 |
Agmon N, Yovel M, Harari Y, Liefshitz B, Kupiec M. The role of Holliday junction resolvases in the repair of spontaneous and induced DNA damage. Nucleic Acids Research. 39: 7009-19. PMID 21609961 DOI: 10.1093/Nar/Gkr277 |
0.464 |
|
| 2011 |
Zhang X, Kupiec M, Gophna U, Tuller T. Analysis of coevolving gene families using mutually exclusive orthologous modules. Genome Biology and Evolution. 3: 413-23. PMID 21498882 DOI: 10.1093/Gbe/Evr030 |
0.363 |
|
| 2011 |
Tuller T, Girshovich Y, Sella Y, Kreimer A, Freilich S, Kupiec M, Gophna U, Ruppin E. Association between translation efficiency and horizontal gene transfer within microbial communities. Nucleic Acids Research. 39: 4743-55. PMID 21343180 DOI: 10.1093/Nar/Gkr054 |
0.366 |
|
| 2011 |
Barzel A, Naor A, Privman E, Kupiec M, Gophna U. Homing endonucleases residing within inteins: evolutionary puzzles awaiting genetic solutions. Biochemical Society Transactions. 39: 169-73. PMID 21265767 DOI: 10.1042/Bst0390169 |
0.324 |
|
| 2010 |
Tuller T, Birin H, Kupiec M, Ruppin E. Reconstructing ancestral genomic sequences by co-evolution: formal definitions, computational issues, and biological examples. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 1327-44. PMID 20874411 DOI: 10.1089/Cmb.2010.0112 |
0.306 |
|
| 2010 |
Parnas O, Zipin-Roitman A, Pfander B, Liefshitz B, Mazor Y, Ben-Aroya S, Jentsch S, Kupiec M. Elg1, an alternative subunit of the RFC clamp loader, preferentially interacts with SUMOylated PCNA. The Embo Journal. 29: 2611-22. PMID 20571511 DOI: 10.1038/Emboj.2010.128 |
0.427 |
|
| 2010 |
Ben-Aroya S, Agmon N, Yuen K, Kwok T, McManus K, Kupiec M, Hieter P. Proteasome nuclear activity affects chromosome stability by controlling the turnover of Mms22, a protein important for DNA repair. Plos Genetics. 6: e1000852. PMID 20174551 DOI: 10.1371/Journal.Pgen.1000852 |
0.484 |
|
| 2010 |
Romano GH, Gurvich Y, Lavi O, Ulitsky I, Shamir R, Kupiec M. Different sets of QTLs influence fitness variation in yeast. Molecular Systems Biology. 6: 346. PMID 20160707 DOI: 10.1038/Msb.2010.1 |
0.366 |
|
| 2010 |
Tuller T, Waldman YY, Kupiec M, Ruppin E. Translation efficiency is determined by both codon bias and folding energy. Proceedings of the National Academy of Sciences of the United States of America. 107: 3645-50. PMID 20133581 DOI: 10.1073/Pnas.0909910107 |
0.329 |
|
| 2010 |
Tuller T, Felder Y, Kupiec M. Discovering local patterns of co-evolution: computational aspects and biological examples. Bmc Bioinformatics. 11: 43. PMID 20096103 DOI: 10.1186/1471-2105-11-43 |
0.33 |
|
| 2010 |
Gat-Viks I, Meller R, Kupiec M, Shamir R. Understanding gene sequence variation in the context of transcription regulation in yeast. Plos Genetics. 6: e1000800. PMID 20066030 DOI: 10.1371/Journal.Pgen.1000800 |
0.43 |
|
| 2009 |
Tuller T, Ruppin E, Kupiec M. Properties of untranslated regions of the S. cerevisiae genome. Bmc Genomics. 10: 391. PMID 19698117 DOI: 10.1186/1471-2164-10-391 |
0.423 |
|
| 2009 |
Agmon N, Pur S, Liefshitz B, Kupiec M. Analysis of repair mechanism choice during homologous recombination. Nucleic Acids Research. 37: 5081-92. PMID 19553188 DOI: 10.1093/Nar/Gkp495 |
0.46 |
|
| 2009 |
Schonbrun M, Laor D, López-Maury L, Bähler J, Kupiec M, Weisman R. TOR complex 2 controls gene silencing, telomere length maintenance, and survival under DNA-damaging conditions. Molecular and Cellular Biology. 29: 4584-94. PMID 19546237 DOI: 10.1128/Mcb.01879-08 |
0.478 |
|
| 2009 |
Mazor Y, Kupiec M. Developmentally regulated MAPK pathways modulate heterochromatin in Saccharomyces cerevisiae. Nucleic Acids Research. 37: 4839-49. PMID 19520767 DOI: 10.1093/Nar/Gkp512 |
0.382 |
|
| 2009 |
Yosef N, Kupiec M, Ruppin E, Sharan R. A complex-centric view of protein network evolution. Nucleic Acids Research. 37: e88. PMID 19465379 DOI: 10.1093/Nar/Gkp414 |
0.339 |
|
| 2009 |
Parnas O, Zipin-Roitman A, Mazor Y, Liefshitz B, Ben-Aroya S, Kupiec M. The ELG1 clamp loader plays a role in sister chromatid cohesion. Plos One. 4: e5497. PMID 19430531 DOI: 10.1371/Journal.Pone.0005497 |
0.462 |
|
| 2009 |
Tuller T, Kupiec M, Ruppin E. Co-evolutionary networks of genes and cellular processes across fungal species. Genome Biology. 10: R48. PMID 19416514 DOI: 10.1186/Gb-2009-10-5-R48 |
0.388 |
|
| 2009 |
Ungar L, Yosef N, Sela Y, Sharan R, Ruppin E, Kupiec M. A genome-wide screen for essential yeast genes that affect telomere length maintenance. Nucleic Acids Research. 37: 3840-9. PMID 19386622 DOI: 10.1093/Nar/Gkp259 |
0.492 |
|
| 2009 |
Yosef N, Ungar L, Zalckvar E, Kimchi A, Kupiec M, Ruppin E, Sharan R. Toward accurate reconstruction of functional protein networks. Molecular Systems Biology. 5: 248. PMID 19293828 DOI: 10.1038/Msb.2009.3 |
0.425 |
|
| 2009 |
Fridman V, Gerson-Gurwitz A, Movshovich N, Kupiec M, Gheber L. Midzone organization restricts interpolar microtubule plus-end dynamics during spindle elongation. Embo Reports. 10: 387-93. PMID 19270715 DOI: 10.1038/Embor.2009.7 |
0.312 |
|
| 2009 |
Tuller T, Rubinstein U, Bar D, Gurevitch M, Ruppin E, Kupiec M. Higher-order genomic organization of cellular functions in yeast. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 303-16. PMID 19193148 DOI: 10.1089/Cmb.2008.15Tt |
0.382 |
|
| 2008 |
Ulitsky I, Shlomi T, Kupiec M, Shamir R. From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions. Molecular Systems Biology. 4: 209. PMID 18628749 DOI: 10.1038/Msb.2008.42 |
0.323 |
|
| 2008 |
Barhoom S, Kupiec M, Zhao X, Xu JR, Sharon A. Functional characterization of CgCTR2, a putative vacuole copper transporter that is involved in germination and pathogenicity in Colletotrichum gloeosporioides. Eukaryotic Cell. 7: 1098-108. PMID 18456860 DOI: 10.1128/Ec.00109-07 |
0.329 |
|
| 2008 |
Shachar R, Ungar L, Kupiec M, Ruppin E, Sharan R. A systems-level approach to mapping the telomere length maintenance gene circuitry. Molecular Systems Biology. 4: 172. PMID 18319724 DOI: 10.1038/Msb.2008.13 |
0.45 |
|
| 2008 |
Barzel A, Kupiec M. Finding a match: how do homologous sequences get together for recombination? Nature Reviews. Genetics. 9: 27-37. PMID 18040271 DOI: 10.1038/Nrg2224 |
0.312 |
|
| 2007 |
Tuller T, Kupiec M, Ruppin E. Determinants of protein abundance and translation efficiency in S. cerevisiae. Plos Computational Biology. 3: e248. PMID 18159940 DOI: 10.1371/Journal.Pcbi.0030248 |
0.333 |
|
| 2007 |
Haviv-Chesner A, Kobayashi Y, Gabriel A, Kupiec M. Capture of linear fragments at a double-strand break in yeast. Nucleic Acids Research. 35: 5192-202. PMID 17670800 DOI: 10.1093/Nar/Gkm521 |
0.434 |
|
| 2007 |
Kupiec M, Sharan R, Ruppin E. Genetic interactions in yeast: is robustness going bust? Molecular Systems Biology. 3: 97. PMID 17389877 DOI: 10.1038/Msb4100146 |
0.358 |
|
| 2007 |
Steinfeld I, Shamir R, Kupiec M. A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription. Nature Genetics. 39: 303-9. PMID 17325681 DOI: 10.1038/Ng1965 |
0.359 |
|
| 2007 |
Weisman R, Roitburg I, Schonbrun M, Harari R, Kupiec M. Opposite effects of tor1 and tor2 on nitrogen starvation responses in fission yeast. Genetics. 175: 1153-62. PMID 17179073 DOI: 10.1534/Genetics.106.064170 |
0.416 |
|
| 2007 |
Kaplan Y, Kupiec M. A role for the yeast cell cycle/splicing factor Cdc40 in the G1/S transition. Current Genetics. 51: 123-40. PMID 17171376 DOI: 10.1007/S00294-006-0113-Y |
0.375 |
|
| 2006 |
Deutscher D, Meilijson I, Kupiec M, Ruppin E. Multiple knockout analysis of genetic robustness in the yeast metabolic network. Nature Genetics. 38: 993-8. PMID 16941010 DOI: 10.1038/Ng1856 |
0.382 |
|
| 2005 |
Tanay A, Steinfeld I, Kupiec M, Shamir R. Integrative analysis of genome-wide experiments in the context of a large high-throughput data compendium. Molecular Systems Biology. 1: 2005.0002. PMID 16729037 DOI: 10.1038/Msb4100005 |
0.314 |
|
| 2005 |
Kaufman A, Keinan A, Meilijson I, Kupiec M, Ruppin E. Quantitative analysis of genetic and neuronal multi-perturbation experiments. Plos Computational Biology. 1: e64. PMID 16322764 DOI: 10.1371/Journal.Pcbi.0010064 |
0.302 |
|
| 2005 |
Havilio M, Levanon EY, Lerman G, Kupiec M, Eisenberg E. Evidence for abundant transcription of non-coding regions in the Saccharomyces cerevisiae genome. Bmc Genomics. 6: 93. PMID 15960846 DOI: 10.1186/1471-2164-6-93 |
0.359 |
|
| 2005 |
Aroya SB, Kupiec M. The Elg1 replication factor C-like complex: a novel guardian of genome stability. Dna Repair. 4: 409-17. PMID 15725622 DOI: 10.1016/J.Dnarep.2004.08.003 |
0.439 |
|
| 2005 |
Aylon Y, Kupiec M. Cell cycle-dependent regulation of double-strand break repair: a role for the CDK. Cell Cycle (Georgetown, Tex.). 4: 259-61. PMID 15655342 DOI: 10.4161/Cc.4.2.1429 |
0.439 |
|
| 2005 |
Rog O, Smolikov S, Krauskopf A, Kupiec M. The yeast VPS genes affect telomere length regulation. Current Genetics. 47: 18-28. PMID 15551135 DOI: 10.1007/S00294-004-0548-Y |
0.465 |
|
| 2005 |
Weisman R, Roitburg I, Nahari T, Kupiec M. Regulation of leucine uptake by tor1+ in Schizosaccharomyces pombe is sensitive to rapamycin. Genetics. 169: 539-50. PMID 15466417 DOI: 10.1534/Genetics.104.034983 |
0.383 |
|
| 2004 |
Aylon Y, Liefshitz B, Kupiec M. The CDK regulates repair of double-strand breaks by homologous recombination during the cell cycle. The Embo Journal. 23: 4868-75. PMID 15549137 DOI: 10.1038/Sj.Emboj.7600469 |
0.43 |
|
| 2004 |
Aylon Y, Kupiec M. DSB repair: the yeast paradigm. Dna Repair. 3: 797-815. PMID 15279765 DOI: 10.1016/J.Dnarep.2004.04.013 |
0.461 |
|
| 2004 |
Ben-Aroya S, Mieczkowski PA, Petes TD, Kupiec M. The compact chromatin structure of a Ty repeated sequence suppresses recombination hotspot activity in Saccharomyces cerevisiae. Molecular Cell. 15: 221-31. PMID 15260973 DOI: 10.1016/J.Molcel.2004.06.002 |
0.377 |
|
| 2004 |
Askree SH, Yehuda T, Smolikov S, Gurevich R, Hawk J, Coker C, Krauskopf A, Kupiec M, McEachern MJ. A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proceedings of the National Academy of Sciences of the United States of America. 101: 8658-63. PMID 15161972 DOI: 10.1073/Pnas.0401263101 |
0.471 |
|
| 2004 |
Dahan O, Kupiec M. The Saccharomyces cerevisiae gene CDC40/PRP17 controls cell cycle progression through splicing of the ANC1 gene. Nucleic Acids Research. 32: 2529-40. PMID 15133121 DOI: 10.1093/Nar/Gkh574 |
0.404 |
|
| 2004 |
Gray M, Kupiec M, Honigberg SM. Site-specific genomic (SSG) and random domain-localized (RDL) mutagenesis in yeast. Bmc Biotechnology. 4: 7. PMID 15090068 DOI: 10.1186/1472-6750-4-7 |
0.341 |
|
| 2004 |
Aylon Y, Kupiec M. New insights into the mechanism of homologous recombination in yeast. Mutation Research. 566: 231-48. PMID 15082239 DOI: 10.1016/J.Mrrev.2003.10.001 |
0.484 |
|
| 2004 |
Tanay A, Sharan R, Kupiec M, Shamir R. Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proceedings of the National Academy of Sciences of the United States of America. 101: 2981-6. PMID 14973197 DOI: 10.1073/Pnas.0308661100 |
0.356 |
|
| 2003 |
Aylon Y, Kupiec M. The checkpoint protein Rad24 of Saccharomyces cerevisiae is involved in processing double-strand break ends and in recombination partner choice. Molecular and Cellular Biology. 23: 6585-96. PMID 12944484 DOI: 10.1128/Mcb.23.18.6585-6596.2003 |
0.445 |
|
| 2003 |
Ben-Aroya S, Koren A, Liefshitz B, Steinlauf R, Kupiec M. ELG1, a yeast gene required for genome stability, forms a complex related to replication factor C. Proceedings of the National Academy of Sciences of the United States of America. 100: 9906-11. PMID 12909721 DOI: 10.1073/Pnas.1633757100 |
0.462 |
|
| 2003 |
Koren A, Ben-Aroya S, Steinlauf R, Kupiec M. Pitfalls of the synthetic lethality screen in Saccharomyces cerevisiae: an improved design. Current Genetics. 43: 62-9. PMID 12684846 DOI: 10.1007/S00294-003-0373-8 |
0.37 |
|
| 2003 |
Aylon Y, Liefshitz B, Bitan-Banin G, Kupiec M. Molecular dissection of mitotic recombination in the yeast Saccharomyces cerevisiae. Molecular and Cellular Biology. 23: 1403-17. PMID 12556499 DOI: 10.1128/Mcb.23.4.1403-1417.2003 |
0.448 |
|
| 2002 |
Koren A, Ben-Aroya S, Kupiec M. Control of meiotic recombination initiation: a role for the environment? Current Genetics. 42: 129-39. PMID 12491006 DOI: 10.1007/S00294-002-0340-9 |
0.42 |
|
| 2002 |
Dahan O, Kupiec M. Mutations in genes of Saccharomyces cerevisiae encoding pre-mRNA splicing factors cause cell cycle arrest through activation of the spindle checkpoint. Nucleic Acids Research. 30: 4361-70. PMID 12384582 DOI: 10.1093/Nar/Gkf563 |
0.443 |
|
| 2001 |
Friedl AA, Liefshitz B, Steinlauf R, Kupiec M. Deletion of the SRS2 gene suppresses elevated recombination and DNA damage sensitivity in rad5 and rad18 mutants of Saccharomyces cerevisiae. Mutation Research. 486: 137-46. PMID 11425518 DOI: 10.1016/S0921-8777(01)00086-6 |
0.449 |
|
| 2000 |
Russell CS, Ben-Yehuda S, Dix I, Kupiec M, Beggs JD. Functional analyses of interacting factors involved in both pre-mRNA splicing and cell cycle progression in Saccharomyces cerevisiae. Rna (New York, N.Y.). 6: 1565-72. PMID 11105756 DOI: 10.1017/S1355838200000984 |
0.359 |
|
| 2000 |
Inbar O, Kupiec M. Recombination between divergent sequences leads to cell death in a mismatch-repair-independent manner. Current Genetics. 38: 23-32. PMID 10953878 DOI: 10.1007/S002940000124 |
0.466 |
|
| 2000 |
Inbar O, Liefshitz B, Bitan G, Kupiec M. The relationship between homology length and crossing over during the repair of a broken chromosome. The Journal of Biological Chemistry. 275: 30833-8. PMID 10924495 DOI: 10.1074/Jbc.C000133200 |
0.444 |
|
| 2000 |
Kupiec M. Damage-induced recombination in the yeast Saccharomyces cerevisiae. Mutation Research. 451: 91-105. PMID 10915867 DOI: 10.1016/S0027-5107(00)00042-7 |
0.463 |
|
| 1999 |
Jablonovich Z, Liefshitz B, Steinlauf R, Kupiec M. Characterization of the role played by the RAD59 gene of Saccharomyces cerevisiae in ectopic recombination Current Genetics. 36: 13-20. PMID 10447590 DOI: 10.1007/S002940050467 |
0.469 |
|
| 1999 |
Inbar O, Kupiec M. Homology Search and Choice of Homologous Partner during Mitotic Recombination Molecular and Cellular Biology. 19: 4134-4142. PMID 10330153 DOI: 10.1128/Mcb.19.6.4134 |
0.471 |
|
| 1999 |
Dix I, Russell C, Yehuda SB, Kupiec M, Beggs JD. The identification and characterization of a novel splicing protein, Isy1p, of Saccharomyces cerevisiae. Rna (New York, N.Y.). 5: 360-8. PMID 10094305 DOI: 10.1017/S1355838299981396 |
0.357 |
|
| 1998 |
Boger-Nadjar E, Vaisman N, Ben-Yehuda S, Kassir Y, Kupiec M. Efficient initiation of S-phase in yeast requires Cdc40p, a protein involved in pre-mRNA splicing. Molecular & General Genetics : Mgg. 260: 232-41. PMID 9862477 DOI: 10.1007/S004380050891 |
0.414 |
|
| 1998 |
Ben Yehuda S, Dix I, Russell CS, Levy S, Beggs JD, Kupiec M. Identification and functional analysis of hPRP17, the human homologue of the PRP17/CDC40 yeast gene involved in splicing and cell cycle control. Rna (New York, N.Y.). 4: 1304-12. PMID 9769104 DOI: 10.1017/S1355838298980712 |
0.437 |
|
| 1998 |
Liefshitz B, Steinlauf R, Friedl A, Eckardt-Schupp F, Kupiec M. Genetic interactions between mutants of the `error-prone' repair group of Saccharomyces cerevisiae and their effect on recombination and mutagenesis Mutation Research-Dna Repair. 407: 135-145. PMID 9637242 DOI: 10.1016/S0921-8777(97)00070-0 |
0.455 |
|
| 1997 |
Nevo-Caspi Y, Kupiec M. cDNA-mediated Ty recombination can take place in the absence of plus-strand cDNA synthesis, but not in the absence of the integrase protein Current Genetics. 32: 32-40. PMID 9309168 DOI: 10.1007/S002940050245 |
0.415 |
|
| 1997 |
Kupiec M, Steinlauf R. Damage-induced ectopic recombination in the yeast Saccharomyces cerevisiae Mutation Research-Dna Repair. 384: 33-44. PMID 9201271 DOI: 10.1016/S0921-8777(97)00012-8 |
0.45 |
|
| 1995 |
Vaisman N, Tsouladze A, Robzyk K, Ben-Yehuda S, Kupiec M, Kassir Y. The role of Saccharomyces cerevisiae Cdc40p in DNA replication and mitotic spindle formation and/or maintenance. Molecular & General Genetics : Mgg. 247: 123-36. PMID 7753021 DOI: 10.1007/Bf00705642 |
0.42 |
|
| 1994 |
Nevo-Caspi Y, Kupiec M. Transcriptional induction of Ty recombination in yeast Proceedings of the National Academy of Sciences of the United States of America. 91: 12711-12715. PMID 7809107 DOI: 10.1073/Pnas.91.26.12711 |
0.406 |
|
| 1993 |
Roitgrund C, Steinlauf R, Kupiec M. Donation: a new, facile method of gene replacement in yeast. Molecular Genetics and Genomics. 237: 306-310. PMID 8455564 DOI: 10.1007/Bf00282812 |
0.392 |
|
| 1993 |
Roitgrund C, Steinlauf R, Kupiec M. Donation of information to the unbroken chromosome in double-strand break repair. Current Genetics. 23: 414-422. PMID 8319297 DOI: 10.1007/Bf00312628 |
0.427 |
|
| 1992 |
Melamed C, Kupiec M. Effect of donor copy number on the rate of gene conversion in the yeast Saccharomyces cerevisiae. Molecular Genetics and Genomics. 235: 97-103. PMID 1435735 DOI: 10.1007/Bf00286186 |
0.4 |
|
| 1992 |
Melamed C, Nevo Y, Kupiec M. Involvement of cDNA in homologous recombination between Ty elements in Saccharomyces cerevisiae. Molecular and Cellular Biology. 12: 1613-1620. PMID 1372387 DOI: 10.1128/Mcb.12.4.1613 |
0.396 |
|
| 1992 |
Parket A, Kupiec M. Ectopic recombination between Ty elements in Saccharomyces cerevisiae is not induced by DNA damage. Molecular and Cellular Biology. 12: 4441-4448. PMID 1328855 DOI: 10.1128/Mcb.12.10.4441 |
0.367 |
|
| 1989 |
Petes TD, Detloff P, Jinks-Robertson S, Judd SR, Kupiec M, Nag D, Stapleton A, Symington LS, Vincent A, White M. Recombination in yeast and the recombinant DNA technology. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 31: 536-40. PMID 2698829 DOI: 10.1139/G89-102 |
0.438 |
|
| 1988 |
Kupiec M, Petes TD. Meiotic recombination between repeated transposable elements in Saccharomyces cerevisiae Molecular and Cellular Biology. 8: 2942-2954. PMID 2841590 DOI: 10.1128/Mcb.8.7.2942 |
0.357 |
|
| 1986 |
Kupiec M, Simchen G. Regulation of the RAD6 gene of Saccharomyces cerevisiae in the mitotic cell cycle and in meiosis. Molecular Genetics and Genomics. 203: 538-543. PMID 3528754 DOI: 10.1007/Bf00422083 |
0.348 |
|
| 1986 |
Kupiec M, Simchen G. DNA-repair characterization of cdc40-1, a cell-cycle mutant of Saccharomyces cerevisiae. Mutation Research. 162: 33-40. PMID 3523226 DOI: 10.1016/0027-5107(86)90068-0 |
0.378 |
|
| 1986 |
Kupiec M. The RAD50 gene of Saccharomyces cerevisiae is not essential for vegetative growth Current Genetics. 10: 487-489. PMID 3327607 DOI: 10.1007/Bf00419878 |
0.397 |
|
| 1985 |
Kassir Y, Kupiec M, Shalom A, Simchen G. Cloning and mapping of CDC40 , a Saccharomyces cerevisiae gene with a role in DNA repair Current Genetics. 9: 253-257. PMID 3916722 DOI: 10.1007/Bf00419952 |
0.439 |
|
| 1985 |
Kupiec M, Simchen G. Arrest of the mitotic cell cycle and of meiosis in Saccharomyces cerevisiae by MMS Molecular Genetics and Genomics. 201: 558-564. DOI: 10.1007/Bf00331356 |
0.317 |
|
| 1984 |
Kupiec M, Simchen G. Cloning and integrative deletion of the RAD6 gene of Saccharomyces cerevisiae. Current Genetics. 8: 559-566. PMID 24177994 DOI: 10.1007/Bf00395700 |
0.436 |
|
| 1984 |
Kupiec M, Simchen G. Cloning and mapping of the RAD50 gene of Saccharomyces cerevisiae Molecular Genetics and Genomics. 193: 525-531. PMID 6323924 DOI: 10.1007/Bf00382094 |
0.401 |
|
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