| Year |
Citation |
Score |
| 2016 |
Talukder N, Zaki MJ. A distributed approach for graph mining in massive networks Data Mining and Knowledge Discovery. 1-29. DOI: 10.1007/S10618-016-0466-X |
0.385 |
|
| 2016 |
Li G, Zaki MJ. Sampling frequent and minimal boolean patterns: theory and application in classification Data Mining and Knowledge Discovery. 30: 181-225. DOI: 10.1007/S10618-015-0409-Y |
0.386 |
|
| 2015 |
Janga SC, Zhu D, Chen JY, Zaki MJ. Knowledge Discovery Using Big Data in Biomedical Systems. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 726-8. PMID 26605379 DOI: 10.1109/Tcbb.2015.2454551 |
0.318 |
|
| 2014 |
Pupacdi B, Javed A, Zaki MJ, Ruchirawat M. NSIT: novel sequence identification tool. Plos One. 9: e108011. PMID 25264906 DOI: 10.1371/Journal.Pone.0108011 |
0.307 |
|
| 2014 |
Dafé G, Veloso A, Zaki M, Meira W. Learning sequential classifiers from long and noisy discrete-event sequences efficiently Data Mining and Knowledge Discovery. 29: 1685-1708. DOI: 10.1007/S10618-014-0391-9 |
0.405 |
|
| 2012 |
Ramakrishnan V, Srinivasan SP, Salem SM, Matthews SJ, Colón W, Zaki M, Bystroff C. Geofold: topology-based protein unfolding pathways capture the effects of engineered disulfides on kinetic stability. Proteins. 80: 920-34. PMID 22189917 DOI: 10.1002/Prot.23249 |
0.564 |
|
| 2012 |
Anchuri P, Zaki MJ, Barkol O, Bergman R, Felder Y, Golan S, Sityon A. Graph mining for discovering infrastructure patterns in configuration management databases Knowledge and Information Systems. 33: 491-522. DOI: 10.1007/S10115-012-0528-3 |
0.432 |
|
| 2012 |
Yildirim H, Chaoji V, Zaki MJ. GRAIL: A scalable index for reachability queries in very large graphs Vldb Journal. 21: 509-534. DOI: 10.1007/s00778-011-0256-4 |
0.755 |
|
| 2012 |
Li G, Semerci M, Yener B, Zaki MJ. Effective graph classification based on topological and label attributes Statistical Analysis and Data Mining. 5: 265-283. DOI: 10.1002/Sam.11153 |
0.397 |
|
| 2012 |
Silva A, Meira W, Zaki MJ. Mining attributestructure correlated patterns in large attributed graphs Proceedings of the Vldb Endowment. 5: 466-477. |
0.332 |
|
| 2011 |
Anchuri P, Zaki MJ, Barkol O, Bergman R, Felder Y, Golan S, Sityon A. Infrastructure pattern discovery in configuration management databases via large sparse graph mining Proceedings - Ieee International Conference On Data Mining, Icdm. 11-20. DOI: 10.1109/ICDM.2011.81 |
0.332 |
|
| 2011 |
Hasan MA, Salem S, Zaki MJ. SimClus: An effective algorithm for clustering with a lower bound on similarity Knowledge and Information Systems. 28: 665-685. DOI: 10.1007/s10115-010-0360-6 |
0.612 |
|
| 2011 |
Chaoji V, Li G, Yildirim H, Zaki MJ. ABACUS: Mining arbitrary shaped clusters from large datasets based on backbone identification Proceedings of the 11th Siam International Conference On Data Mining, Sdm 2011. 295-306. |
0.767 |
|
| 2010 |
Salem S, Zaki MJ, Bystroff C. FlexSnap: flexible non-sequential protein structure alignment. Algorithms For Molecular Biology : Amb. 5: 12. PMID 20047669 DOI: 10.1186/1748-7188-5-12 |
0.628 |
|
| 2010 |
Zaki MJ, Ramakrishnan N, Zhao L. Mining Frequent Boolean Expressions International Journal of Knowledge Discovery in Bioinformatics. 1: 68-96. DOI: 10.4018/Jkdb.2010070105 |
0.508 |
|
| 2010 |
Silva A, Meira W, Zaki MJ. Structural Correlation Pattern mining for large graphs Proceedings of the 8th Workshop On Mining and Learning With Graphs, Mlg'10. 119-126. DOI: 10.1145/1830252.1830268 |
0.301 |
|
| 2010 |
Atre M, Chaoji V, Zaki MJ, Hendler JA. Matrix "bit" loaded: A scalable lightweight join query processor for RDF data Proceedings of the 19th International Conference On World Wide Web, Www '10. 41-50. DOI: 10.1145/1772690.1772696 |
0.766 |
|
| 2010 |
Zaki MJ, Carothers CD, Szymanski BK. VOGUE: A variable order hidden Markov model with duration based on frequent sequence mining Acm Transactions On Knowledge Discovery From Data. 4. DOI: 10.1145/1644873.1644878 |
0.385 |
|
| 2010 |
Yildirim H, Zaki MJ. Graph indexing for reachability queries Proceedings - International Conference On Data Engineering. 321-324. DOI: 10.1109/ICDEW.2010.5452724 |
0.569 |
|
| 2010 |
Gouda K, Hassaan M, Zaki MJ. Prism: An effective approach for frequent sequence mining via prime-block encoding Journal of Computer and System Sciences. 76: 88-102. DOI: 10.1016/J.Jcss.2009.05.008 |
0.425 |
|
| 2010 |
Yildirim H, Chaoji V, Zaki MJ. GRAIL: Scalable reachability index for large graphs Proceedings of the Vldb Endowment. 3: 276-284. |
0.751 |
|
| 2009 |
Lund AW, Bilgin CC, Hasan MA, McKeen LM, Stegemann JP, Yener B, Zaki MJ, Plopper GE. Quantification of spatial parameters in 3D cellular constructs using graph theory. Journal of Biomedicine & Biotechnology. 2009: 928286. PMID 19920859 DOI: 10.1155/2009/928286 |
0.331 |
|
| 2009 |
Qureshi AH, Chaoji V, Maiguel D, Faridi MH, Barth CJ, Salem SM, Singhal M, Stoub D, Krastins B, Ogihara M, Zaki MJ, Gupta V. Proteomic and phospho-proteomic profile of human platelets in basal, resting state: insights into integrin signaling. Plos One. 4: e7627. PMID 19859549 DOI: 10.1371/Journal.Pone.0007627 |
0.744 |
|
| 2009 |
Salem S, Zaki MJ, Bystroff C. Iterative non-sequential protein structural alignment. Journal of Bioinformatics and Computational Biology. 7: 571-96. PMID 19507290 DOI: 10.1142/S0219720009004205 |
0.644 |
|
| 2009 |
Hasan MA, Chaoji V, Salem S, Zaki MJ. Robust partitional clustering by outlier and density insensitive seeding Pattern Recognition Letters. 30: 994-1002. DOI: 10.1016/J.Patrec.2009.04.013 |
0.778 |
|
| 2009 |
Chaoji V, Al Hasan M, Salem S, Zaki MJ. SPARCL: An effective and efficient algorithm for mining arbitrary shape-based clusters Knowledge and Information Systems. 21: 201-229. DOI: 10.1007/S10115-009-0216-0 |
0.801 |
|
| 2009 |
Hasan MA, Salem S, Pupacdi B, Zaki MJ. Clustering with lower bound on similarity Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5476: 122-133. DOI: 10.1007/978-3-642-01307-2_14 |
0.608 |
|
| 2009 |
Veloso A, Zaki M, Meira W, Gonçalves M. Competence-conscious associative classification Statistical Analysis and Data Mining. 2: 361-377. DOI: 10.1002/Sam.V2:5/6 |
0.347 |
|
| 2009 |
Al Hasan M, Zaki MJ. Output space sampling for graph patterns Proceedings of the Vldb Endowment. 2: 730-741. |
0.318 |
|
| 2008 |
Salem S, Zaki MJ. Iterative non-sequential protein structural alignment. Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 7: 183-94. PMID 19642279 |
0.609 |
|
| 2008 |
Phoophakdee B, Zaki MJ. TRELLIS+: an effective approach for indexing genome-scale sequences using suffix trees. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 90-101. PMID 18229678 |
0.764 |
|
| 2008 |
Gao F, Zaki MJ. Indexing protein structures using suffix trees. Methods in Molecular Biology (Clifton, N.J.). 413: 147-69. PMID 18075165 DOI: 10.1007/978-1-59745-574-9_6 |
0.371 |
|
| 2008 |
Shentu Z, Al Hasan M, Bystroff C, Zaki MJ. Context shapes: Efficient complementary shape matching for protein-protein docking. Proteins. 70: 1056-73. PMID 17847098 DOI: 10.1002/Prot.21600 |
0.743 |
|
| 2008 |
Zaki MJ, Ramakrishnan N, Parthasarathy S. Biological data mining Scientific Programming. 16: 3. DOI: 10.1155/2008/897294 |
0.363 |
|
| 2008 |
Chen JY, Zaki M, Lonardi S. BIOKDD 2008 Acm Sigkdd Explorations Newsletter. 10: 51-53. DOI: 10.1145/1540276.1540292 |
0.352 |
|
| 2008 |
Chaoji V, Al Hasan M, Salem S, Zaki MJ. SPARCL: Efficient and effective shape-based clustering Proceedings - Ieee International Conference On Data Mining, Icdm. 93-102. DOI: 10.1109/ICDM.2008.73 |
0.798 |
|
| 2008 |
Gao F, Zaki MJ. PSIST: A scalable approach to indexing protein structures using suffix trees Journal of Parallel and Distributed Computing. 68: 54-63. DOI: 10.1016/J.Jpdc.2007.07.008 |
0.39 |
|
| 2008 |
Araújo RB, Ferreira GHT, Orair GH, Meira W, Ferreira RAC, Neto DOG, Zaki MJ. The ParTriCluster algorithm for gene expression analysis International Journal of Parallel Programming. 36: 226-249. DOI: 10.1007/S10766-007-0067-9 |
0.417 |
|
| 2008 |
Chaoji V, Al Hasan M, Salem S, Zaki MJ. An integrated, generic approach to pattern mining: Data mining template library Data Mining and Knowledge Discovery. 17: 457-495. DOI: 10.1007/S10618-008-0098-X |
0.798 |
|
| 2008 |
Chaoji V, Hasan MA, Salem S, Besson J, Zaki MJ. ORIGAMI: A novel and effective approach for mining representative orthogonal graph patterns Statistical Analysis and Data Mining. 1: 67-84. DOI: 10.1002/Sam.V1:2 |
0.789 |
|
| 2007 |
Zaki MJ, Karypis G, Yang J. Data Mining in Bioinformatics (BIOKDD). Algorithms For Molecular Biology : Amb. 2: 4. PMID 17428327 DOI: 10.1186/1748-7188-2-4 |
0.48 |
|
| 2007 |
Phoophakdee B, Zaki MJ. Genome-scale disk-based suffix tree indexing Proceedings of the Acm Sigmod International Conference On Management of Data. 833-844. DOI: 10.1145/1247480.1247572 |
0.781 |
|
| 2007 |
Hasan MA, Chaoji V, Salem S, Besson J, Zaki MJ. ORIGAMI: Mining representative orthogonal graph patterns Proceedings - Ieee International Conference On Data Mining, Icdm. 153-162. DOI: 10.1109/ICDM.2007.45 |
0.795 |
|
| 2007 |
Zaki MJ, Peters M, Assent I, Seidl T. Clicks: An effective algorithm for mining subspace clusters in categorical datasets Data and Knowledge Engineering. 60: 51-70. DOI: 10.1016/j.datak.2006.01.005 |
0.361 |
|
| 2006 |
Zhang Y, Zaki MJ. SMOTIF: efficient structured pattern and profile motif search. Algorithms For Molecular Biology : Amb. 1: 22. PMID 17118189 DOI: 10.1186/1748-7188-1-22 |
0.383 |
|
| 2006 |
Zhang Y, Zaki MJ. EXMOTIF: efficient structured motif extraction. Algorithms For Molecular Biology : Amb. 1: 21. PMID 17109757 DOI: 10.1186/1748-7188-1-21 |
0.34 |
|
| 2006 |
Sequeira K, Zaki M. Exploring similarities across high-dimensional datasets Research and Trends in Data Mining Technologies and Applications. 53-84. DOI: 10.4018/978-1-59904-271-8.ch003 |
0.695 |
|
| 2006 |
Zaki MJ, Karypis G, Yang J. BIOKDD06 Acm Sigkdd Explorations Newsletter. 8: 78-78. DOI: 10.1145/1233321.1233331 |
0.385 |
|
| 2006 |
Piatetsky-Shapiro G, Djeraba C, Getoor L, Grossman R, Feldman R, Zaki M. What are the grand challenges for data mining? Acm Sigkdd Explorations Newsletter. 8: 70-77. DOI: 10.1145/1233321.1233330 |
0.362 |
|
| 2006 |
Zaki MJ, Aggarwal CC. XRules: An effective algorithm for structural classification of XML data Machine Learning. 62: 137-170. DOI: 10.1007/S10994-006-5832-2 |
0.392 |
|
| 2006 |
Zhang S, Zaki MJ. Mining multiple data sources: Local pattern analysis Data Mining and Knowledge Discovery. 12: 121-125. DOI: 10.1007/S10618-006-0041-Y |
0.401 |
|
| 2006 |
Zaki MJ, De N, Gao F, Palmerini P, Parimi N, Pathuri J, Phoophakdee B, Urban J. Generic pattern mining via data mining template library Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3848: 362-379. DOI: 10.1007/11615576_17 |
0.8 |
|
| 2005 |
Sequeira K, Zaki M. SCHISM: A new approach to interesting subspace mining International Journal of Business Intelligence and Data Mining. 1: 137-160. DOI: 10.1504/Ijbidm.2005.008360 |
0.748 |
|
| 2005 |
Goethals B, Nijssen S, Zaki MJ. Open source data mining Acm Sigkdd Explorations Newsletter. 7: 143-144. DOI: 10.1145/1117454.1117476 |
0.397 |
|
| 2005 |
Parthasarathy S, Wang W, Zaki M. BIOKDD 2005 workshop report Acm Sigkdd Explorations Newsletter. 7: 129-131. DOI: 10.1145/1117454.1117472 |
0.328 |
|
| 2005 |
Zaki MJ, Ramakrishnan N. Reasoning about sets using redescription mining Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 364-373. DOI: 10.1145/1081870.1081912 |
0.389 |
|
| 2005 |
Zaki MJ, Hsiao CJ. Efficient algorithms for mining closed itemsets and their lattice structure Ieee Transactions On Knowledge and Data Engineering. 17: 462-478. DOI: 10.1109/Tkde.2005.60 |
0.451 |
|
| 2005 |
Zaki MJ. Efficiently mining frequent trees in a forest: Algorithms and applications Ieee Transactions On Knowledge and Data Engineering. 17: 1021-1035. DOI: 10.1109/Tkde.2005.125 |
0.445 |
|
| 2005 |
Ramesh G, Zaki MJ, Maniatty WA. Distribution-based synthetic database generation techniques for itemset mining Proceedings of the International Database Engineering and Applications Symposium, Ideas. 2005: 307-316. DOI: 10.1109/IDEAS.2005.22 |
0.366 |
|
| 2005 |
Zaki MJ, Peters M. CLICKS: Mining subspace clusters in categorical data via K-partite maximal cliques Proceedings - International Conference On Data Engineering. 355-356. DOI: 10.1109/ICDE.2005.33 |
0.352 |
|
| 2005 |
Gouda K, Zaki MJ. GenMax: An efficient algorithm for mining maximal frequent itemsets Data Mining and Knowledge Discovery. 11: 223-242. DOI: 10.1007/S10618-005-0002-X |
0.445 |
|
| 2005 |
Zaki MJ, Parimi N, De N, Gao F, Phoophakdee B, Urban J, Chaoji V, Al Hasan M, Salem S. Towards generic pattern mining Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science). 3403: 1-20. DOI: 10.1007/11590316_12 |
0.79 |
|
| 2005 |
Zhao L, Zaki MJ. TRICLUSTER: An effective algorithm for mining coherent clusters in 3D microarray data Proceedings of the Acm Sigmod International Conference On Management of Data. 694-705. |
0.348 |
|
| 2005 |
Zaki MJ. Efficiently mining frequent embedded unordered trees Fundamenta Informaticae. 66: 33-52. |
0.357 |
|
| 2004 |
Zaki MJ, Morishita S, Rigoutsos I. Report on BIOKDD04 Acm Sigkdd Explorations Newsletter. 6: 153-154. DOI: 10.1145/1046456.1046486 |
0.351 |
|
| 2004 |
Goethals B, Zaki MJ. Advances in frequent itemset mining implementations Acm Sigkdd Explorations Newsletter. 6: 109-117. DOI: 10.1145/1007730.1007744 |
0.424 |
|
| 2004 |
Sequeira K, Zaki M. SCHISM: A new approach for interesting subspace mining Proceedings - Fourth Ieee International Conference On Data Mining, Icdm 2004. 186-193. DOI: 10.1109/ICDM.2004.10099 |
0.731 |
|
| 2004 |
Zaki MJ. Mining non-redundant association rules Data Mining and Knowledge Discovery. 9: 223-248. DOI: 10.1023/B:Dami.0000040429.96086.C7 |
0.363 |
|
| 2003 |
Zaki MJ, Wang JTL, Toivonen HTT. Data mining in bioinformatics Acm Sigkdd Explorations Newsletter. 5: 198-199. DOI: 10.1145/980972.981006 |
0.342 |
|
| 2003 |
Sequeira K, Zaki M, Szymanski B, Carothers C. Improving spatial locality of programs via data mining Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 649-654. DOI: 10.1145/956750.956834 |
0.675 |
|
| 2003 |
Pan F, Cong G, Tung AKH, Yang J, Zaki MJ. Carpenter: Finding closed patterns in long biological datasets Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 637-642. DOI: 10.1145/956750.956832 |
0.356 |
|
| 2003 |
Zaki MJ, Gouda K. Fast vertical mining using diffsets Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 326-335. DOI: 10.1145/956750.956788 |
0.377 |
|
| 2002 |
Zaki MJ, Wang JTL, Toivonen HTT. BIOKDD 2002 Acm Sigkdd Explorations Newsletter. 4: 112-114. DOI: 10.1145/772862.772884 |
0.364 |
|
| 2002 |
Zaki MJ, Wang JTL, Toivonen HTT. BIOKDD01 Acm Sigkdd Explorations Newsletter. 3: 71. DOI: 10.1145/507515.507527 |
0.332 |
|
| 2002 |
Zaki MJ, Pan Y. Introduction: Recent developments in parallel and distributed data mining Distributed and Parallel Databases. 11: 123-127. DOI: 10.1023/A:1013918601668 |
0.311 |
|
| 2002 |
Zaki MJ. Efficiently mining frequent trees in a forest Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 71-80. |
0.339 |
|
| 2001 |
Zaki MJ. SPADE: An efficient algorithm for mining frequent sequences Machine Learning. 42: 31-60. DOI: 10.1023/A:1007652502315 |
0.46 |
|
| 2001 |
Parthasarathy S, Zaki MJ, Ogihara M, Li W. Parallel Data Mining for Association Rules on Shared-Memory Systems Knowledge and Information Systems. 3: 1-29. DOI: 10.1007/Pl00011656 |
0.394 |
|
| 2001 |
Zaki MJ. Parallel Sequence Mining on Shared-Memory Machines Journal of Parallel and Distributed Computing. 61: 401-426. DOI: 10.1006/Jpdc.2000.1695 |
0.378 |
|
| 2001 |
Gouda K, Zaki MJ. Efficiently mining maximal frequent itemsets Proceedings - Ieee International Conference On Data Mining, Icdm. 163-170. |
0.327 |
|
| 2000 |
Maniatty WA, Zaki MJ. Systems support for scalable data mining Acm Sigkdd Explorations Newsletter. 2: 56-65. DOI: 10.1145/380995.381015 |
0.376 |
|
| 2000 |
Zaki MJ. Scalable algorithms for association mining Ieee Transactions On Knowledge and Data Engineering. 12: 372-390. DOI: 10.1109/69.846291 |
0.449 |
|
| 2000 |
Lesh N, Zaki MJ, Ogihara M. Scalable feature mining for sequential data Ieee Intelligent Systems and Their Applications. 15: 48-56. DOI: 10.1109/5254.850827 |
0.418 |
|
| 2000 |
Zaki MJ, Lesh N, Ogihara M. PLANMINE: Predicting plan failures using sequence mining Artificial Intelligence Review. 14: 421-446. DOI: 10.1023/A:1006612804250 |
0.396 |
|
| 1999 |
Zaki M. Parallel and distributed association mining: a survey Ieee Concurrency. 7: 14-25. DOI: 10.1109/4434.806975 |
0.315 |
|
| 1999 |
Parthasarathy S, Zaki MJ, Ogihara M, Dwarkadas S. Incremental and interactive sequence mining International Conference On Information and Knowledge Management, Proceedings. 251-258. |
0.334 |
|
| 1997 |
Zaki MJ, Parthasarathy S, Ogihara M, Li W. Parallel Algorithms for Discovery of Association Rules Data Mining and Knowledge Discovery. 1: 343-373. DOI: 10.1023/A:1009773317876 |
0.477 |
|
| 1997 |
Zaki MJ, Parthasarathy S, Ogihara M, Li W. Parallel algorithms for discovery of association rules Data Mining and Knowledge Discovery. 1: 343-373. |
0.377 |
|
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