Jianming Yu, Ph.D. - Publications

2003 University of Minnesota, Twin Cities, Minneapolis, MN 
Agronomy Agriculture, Genetics, Plant Culture Agriculture

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lin M, Zhang D, Liu S, Zhang G, Yu J, Fritz AK, Bai G. Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat. Bmc Genomics. 17: 794. PMID 27729004 DOI: 10.1186/S12864-016-3148-6  1
2016 Yu X, Li X, Guo T, Zhu C, Wu Y, Mitchell SE, Roozeboom KL, Wang D, Wang ML, Pederson GA, Tesso TT, Schnable PS, Bernardo R, Yu J. Genomic prediction contributing to a promising global strategy to turbocharge gene banks. Nature Plants. 2: 16150. PMID 27694945 DOI: 10.1038/Nplants.2016.150  1
2015 Leiboff S, Li X, Hu HC, Todt N, Yang J, Li X, Yu X, Muehlbauer GJ, Timmermans MC, Yu J, Schnable PS, Scanlon MJ. Genetic control of morphometric diversity in the maize shoot apical meristem. Nature Communications. 6: 8974. PMID 26584889 DOI: 10.1038/Ncomms9974  1
2015 Li X, Li X, Fridman E, Tesso TT, Yu J. Dissecting repulsion linkage in the dwarfing gene Dw3 region for sorghum plant height provides insights into heterosis. Proceedings of the National Academy of Sciences of the United States of America. PMID 26351684 DOI: 10.1073/Pnas.1509229112  1
2015 Adeyanju A, Little C, Yu J, Tesso T. Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum. G3 (Bethesda, Md.). 5: 1165-75. PMID 25882062 DOI: 10.1534/G3.114.016394  1
2015 Lipka AE, Kandianis CB, Hudson ME, Yu J, Drnevich J, Bradbury PJ, Gore MA. From association to prediction: statistical methods for the dissection and selection of complex traits in plants. Current Opinion in Plant Biology. 24: 110-8. PMID 25795170 DOI: 10.1016/J.Pbi.2015.02.010  1
2015 Li X, Scanlon MJ, Yu J. Evolutionary patterns of DNA base composition and correlation to polymorphisms in DNA repair systems. Nucleic Acids Research. 43: 3614-25. PMID 25765652 DOI: 10.1093/Nar/Gkv197  1
2015 Thompson AM, Yu J, Timmermans MC, Schnable P, Crants JC, Scanlon MJ, Muehlbauer GJ. Diversity of maize shoot apical meristem architecture and its relationship to plant morphology. G3 (Bethesda, Md.). 5: 819-27. PMID 25748433 DOI: 10.1534/G3.115.017541  1
2014 Zhang D, Bowden RL, Yu J, Carver BF, Bai G. Association analysis of stem rust resistance in U.S. winter wheat. Plos One. 9: e103747. PMID 25072699 DOI: 10.1371/Journal.Pone.0103747  1
2014 Li L, Eichten SR, Shimizu R, Petsch K, Yeh CT, Wu W, Chettoor AM, Givan SA, Cole RA, Fowler JE, Evans MM, Scanlon MJ, Yu J, Schnable PS, Timmermans MC, et al. Genome-wide discovery and characterization of maize long non-coding RNAs. Genome Biology. 15: R40. PMID 24576388 DOI: 10.1186/Gb-2014-15-2-R40  1
2014 Narayanan S, Aiken RM, Vara Prasad PV, Xin Z, Paul G, Yu J. A simple quantitative model to predict leaf area index in sorghum Agronomy Journal. 106: 219-226. DOI: 10.2134/Agronj2013.0311  1
2014 Tabanao DA, Pocsedio AE, Yabes JC, Niño MC, Millas RA, Sevilla NRL, Yulong X, Yu J. Genetic diversity and population structure in a rice drought stress panel Plant Genetic Resources: Characterisation and Utilisation. 13. DOI: 10.1017/S1479262114000884  1
2013 Morris GP, Rhodes DH, Brenton Z, Ramu P, Thayil VM, Deshpande S, Hash CT, Acharya C, Mitchell SE, Buckler ES, Yu J, Kresovich S. Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits. G3 (Bethesda, Md.). 3: 2085-94. PMID 24048646 DOI: 10.1534/G3.113.008417  1
2013 Liu S, Sehgal SK, Li J, Lin M, Trick HN, Yu J, Gill BS, Bai G. Cloning and characterization of a critical regulator for preharvest sprouting in wheat. Genetics. 195: 263-73. PMID 23821595 DOI: 10.1534/Genetics.113.152330  1
2013 Li L, Petsch K, Shimizu R, Liu S, Xu WW, Ying K, Yu J, Scanlon MJ, Schnable PS, Timmermans MC, Springer NM, Muehlbauer GJ. Mendelian and non-Mendelian regulation of gene expression in maize. Plos Genetics. 9: e1003202. PMID 23341782 DOI: 10.1371/Journal.Pgen.1003202  1
2013 Narayanan S, Aiken RM, Vara Prasad PV, Xin Z, Yu J. Water and radiation use efficiencies in sorghum Agronomy Journal. 105: 649-656. DOI: 10.2134/Agronj2012.0377  1
2012 Takacs EM, Li J, Du C, Ponnala L, Janick-Buckner D, Yu J, Muehlbauer GJ, Schnable PS, Timmermans MC, Sun Q, Nettleton D, Scanlon MJ. Ontogeny of the maize shoot apical meristem. The Plant Cell. 24: 3219-34. PMID 22911570 DOI: 10.1105/Tpc.112.099614  1
2012 Li X, Zhu C, Yeh CT, Wu W, Takacs EM, Petsch KA, Tian F, Bai G, Buckler ES, Muehlbauer GJ, Timmermans MC, Scanlon MJ, Schnable PS, Yu J. Genic and nongenic contributions to natural variation of quantitative traits in maize. Genome Research. 22: 2436-44. PMID 22701078 DOI: 10.1101/Gr.140277.112  1
2012 Lin Z, Li X, Shannon LM, Yeh CT, Wang ML, Bai G, Peng Z, Li J, Trick HN, Clemente TE, Doebley J, Schnable PS, Tuinstra MR, Tesso TT, White F, ... Yu J, et al. Parallel domestication of the Shattering1 genes in cereals. Nature Genetics. 44: 720-4. PMID 22581231 DOI: 10.1038/Ng.2281  1
2012 Sukumaran S, Xiang W, Bean SR, Pedersen JF, Kresovich S, Tuinstra MR, Tesso TT, Hamblin MT, Yu J. Association mapping for grain quality in a diverse sorghum collection Plant Genome. 5: 126-135. DOI: 10.3835/Plantgenome2012.07.0016  1
2011 Wang ML, Sukumaran S, Barkley NA, Chen Z, Chen CY, Guo B, Pittman RN, Stalker HT, Holbrook CC, Pederson GA, Yu J. Population structure and marker-trait association analysis of the US peanut (Arachis hypogaea L.) mini-core collection. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 123: 1307-17. PMID 21822942 DOI: 10.1007/S00122-011-1668-7  1
2011 Nelson JC, Wang S, Wu Y, Li X, Antony G, White FF, Yu J. Single-nucleotide polymorphism discovery by high-throughput sequencing in sorghum. Bmc Genomics. 12: 352. PMID 21736744 DOI: 10.1186/1471-2164-12-352  1
2011 Wisser RJ, Kolkman JM, Patzoldt ME, Holland JB, Yu J, Krakowsky M, Nelson RJ, Balint-Kurti PJ. Multivariate analysis of maize disease resistances suggests a pleiotropic genetic basis and implicates a GST gene. Proceedings of the National Academy of Sciences of the United States of America. 108: 7339-44. PMID 21490302 DOI: 10.1073/Pnas.1011739108  1
2011 Li X, Zhu C, Lin Z, Wu Y, Zhang D, Bai G, Song W, Ma J, Muehlbauer GJ, Scanlon MJ, Zhang M, Yu J. Chromosome size in diploid eukaryotic species centers on the average length with a conserved boundary. Molecular Biology and Evolution. 28: 1901-11. PMID 21239390 DOI: 10.1093/Molbev/Msr011  1
2010 Wu X, Staggenborg S, Propheter JL, Rooney WL, Yu J, Wang D. Features of sweet sorghum juice and their performance in ethanol fermentation Industrial Crops and Products. 31: 164-170. DOI: 10.1016/J.Indcrop.2009.10.006  1
2009 Wang ML, Zhu C, Barkley NA, Chen Z, Erpelding JE, Murray SC, Tuinstra MR, Tesso T, Pederson GA, Yu J. Genetic diversity and population structure analysis of accessions in the US historic sweet sorghum collection. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 13-23. PMID 19760215 DOI: 10.1007/S00122-009-1155-6  1
2009 Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, ... ... Yu J, et al. The genetic architecture of maize flowering time. Science (New York, N.Y.). 325: 714-8. PMID 19661422 DOI: 10.1126/Science.1174276  1
2007 Weber A, Clark RM, Vaughn L, Sánchez-Gonzalez Jde J, Yu J, Yandell BS, Bradbury P, Doebley J. Major regulatory genes in maize contribute to standing variation in teosinte (Zea mays ssp. parviglumis). Genetics. 177: 2349-59. PMID 17947410 DOI: 10.1534/Genetics.107.080424  1
2007 Tabanao DA, Yu J, Bernardo R. Multilocus epistasis, linkage, and genetic variance in breeding populations with few parents. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 115: 335-42. PMID 17563867 DOI: 10.1007/S00122-007-0565-6  1
2007 Stich B, Yu J, Melchinger AE, Piepho HP, Utz HF, Maurer HP, Buckler ES. Power to detect higher-order epistatic interactions in a metabolic pathway using a new mapping strategy. Genetics. 176: 563-70. PMID 17194777 DOI: 10.1534/Genetics.106.067033  1
2007 Bernardo R, Yu J. Prospects for genomewide selection for quantitative traits in maize Crop Science. 47: 1082-1090. DOI: 10.2135/Cropsci2006.11.0690  1
2007 Ersoz ES, Yu J, Buckler ES. Applications of linkage disequilibrium and association mapping in crop plants Genomics-Assisted Crop Improvement. 1: 97-119. DOI: 10.1007/978-1-4020-6295-7_5  1
2006 Arbelbide M, Yu J, Bernardo R. Power of mixed-model QTL mapping from phenotypic, pedigree and marker data in self-pollinated crops. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 112: 876-84. PMID 16402189 DOI: 10.1007/S00122-005-0189-7  1
2006 Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S, Buckler ES. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics. 38: 203-8. PMID 16380716 DOI: 10.1038/Ng1702  1
2005 Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES. Maize association population: a high-resolution platform for quantitative trait locus dissection. The Plant Journal : For Cell and Molecular Biology. 44: 1054-64. PMID 16359397 DOI: 10.1111/J.1365-313X.2005.02591.X  1
2005 Yu J, Arbelbide M, Bernardo R. Power of in silico QTL mapping from phenotypic, pedigree, and marker data in a hybrid breeding program. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 110: 1061-7. PMID 15754207 DOI: 10.1007/S00122-005-1926-7  1
2004 Yu J, Bernardo R. Metabolic control analysis as a mechanism that conserves genetic variance during advanced cycle breeding. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 108: 1614-9. PMID 14963653 DOI: 10.1007/S00122-004-1589-9  1
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