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Joshua C. Black, Ph.D. - Publications

Affiliations: 
2013 Chemistry and Biochemistry University of Denver, Denver, CO, United States 
Area:
General Chemistry, General Biophysics, Biochemistry
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Black JC, Kutateladze TG. Atypical histone targets of PHD fingers. The Journal of Biological Chemistry. 104601. PMID 36907441 DOI: 10.1016/j.jbc.2023.104601  0.301
2021 Van Rechem C, Ji F, Chakraborty D, Black JC, Sadreyev RI, Whetstine JR. Collective regulation of chromatin modifications predicts replication timing during cell cycle. Cell Reports. 37: 109799. PMID 34610305 DOI: 10.1016/j.celrep.2021.109799  0.651
2020 Sobral LM, Hicks HM, Parrish JK, McCann TS, Hsieh J, Goodspeed A, Costello JC, Black JC, Jedlicka P. KDM3A/Ets1 epigenetic axis contributes to PAX3/FOXO1-driven and independent disease-promoting gene expression in fusion-positive Rhabdomyosarcoma. Molecular Oncology. PMID 32697014 DOI: 10.1002/1878-0261.12769  0.373
2020 Sobral LM, Sechler M, Parrish JK, McCann TS, Jones KL, Black JC, Jedlicka P. KDM3A/Ets1/MCAM axis promotes growth and metastatic properties in Rhabdomyosarcoma. Genes & Cancer. 11: 53-65. PMID 32577157 DOI: 10.18632/Genesandcancer.200  0.393
2019 Zhang Y, Bertulat B, Tencer AH, Ren X, Wright GM, Black J, Cardoso MC, Kutateladze TG. MORC3 Forms Nuclear Condensates through Phase Separation. Iscience. 17: 182-189. PMID 31284181 DOI: 10.1016/J.Isci.2019.06.030  0.335
2019 Zhang Y, Ahn J, Green KJ, Vann KR, Black J, Brooke CB, Kutateladze TG. MORC3 Is a Target of the Influenza A Viral Protein NS1. Structure (London, England : 1993). PMID 31006586 DOI: 10.1016/J.Str.2019.03.015  0.304
2019 Zhang Y, Klein BJ, Cox KL, Bertulat B, Tencer AH, Holden MR, Wright GM, Black J, Cardoso MC, Poirier MG, Kutateladze TG. Mechanism for autoinhibition and activation of the MORC3 ATPase. Proceedings of the National Academy of Sciences of the United States of America. PMID 30850548 DOI: 10.1073/Pnas.1819524116  0.304
2018 Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Murphy SE, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. 175: 1716. PMID 30500540 DOI: 10.1016/j.cell.2018.11.018  0.601
2018 Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. PMID 30057114 DOI: 10.1016/J.Cell.2018.06.018  0.683
2017 Rechem CV, Black JC, Greninger P, Zhao Y, Boukhali M, Donado C, Aryee MJ, Burrowes Pd, Ladd B, Gräslund S, Haas W, Christiani DC, Benes CH, Whetstine JR. Abstract NTOC-110: UNEXPECTED ROLES FOR KDM4A: PROTEIN SYNTHESIS AND MTOR INHIBITOR SENSITIVITY Clinical Cancer Research. 23. DOI: 10.1158/1557-3265.Ovcasymp16-Ntoc-110  0.656
2016 Black JC, Zhang H, Kim J, Getz G, Whetstine JR. Regulation of Transient Site-specific Copy Gain by microRNA. The Journal of Biological Chemistry. PMID 26755726 DOI: 10.1074/Jbc.M115.711648  0.663
2015 Black JC, Whetstine JR. RNF2 E3 or Not to E3: Dual Roles of RNF2 Overexpression in Melanoma. Cancer Discovery. 5: 1241-3. PMID 26637658 DOI: 10.1158/2159-8290.Cd-15-1285  0.616
2015 Wagschal A, Najafi-Shoushtari SH, Wang L, Goedeke L, Sinha S, deLemos AS, Black JC, Ramírez CM, Li Y, Tewhey R, Hatoum I, Shah N, Lu Y, Kristo F, Psychogios N, et al. Genome-wide identification of microRNAs regulating cholesterol and triglyceride homeostasis. Nature Medicine. PMID 26501192 DOI: 10.1038/Nm.3980  0.6
2015 Tajima K, Yae T, Javaid S, Tam O, Comaills V, Morris R, Wittner BS, Liu M, Engstrom A, Takahashi F, Black JC, Ramaswamy S, Shioda T, Hammell M, Haber DA, et al. SETD1A modulates cell cycle progression through a miRNA network that regulates p53 target genes. Nature Communications. 6: 8257. PMID 26394836 DOI: 10.1038/Ncomms9257  0.67
2015 Black JC, Whetstine JR. Too little O2 Too much gain. Cell Cycle (Georgetown, Tex.). 14: 2869-70. PMID 26221746 DOI: 10.1080/15384101.2015.1076659  0.684
2015 Black JC, Atabakhsh E, Kim J, Biette KM, Van Rechem C, Ladd B, Burrowes PD, Donado C, Mattoo H, Kleinstiver BP, Song B, Andriani G, Joung JK, Iliopoulos O, Montagna C, et al. Hypoxia drives transient site-specific copy gain and drug-resistant gene expression. Genes & Development. 29: 1018-31. PMID 25995187 DOI: 10.1101/Gad.259796.115  0.666
2015 Van Rechem C, Black JC, Greninger P, Zhao Y, Donado C, Burrowes PD, Ladd B, Christiani DC, Benes CH, Whetstine JR. A coding single-nucleotide polymorphism in lysine demethylase KDM4A associates with increased sensitivity to mTOR inhibitors. Cancer Discovery. 5: 245-54. PMID 25564517 DOI: 10.1158/2159-8290.Cd-14-1159  0.645
2015 Van Rechem C, Black JC, Boukhali M, Aryee MJ, Gräslund S, Haas W, Benes CH, Whetstine JR. Lysine demethylase KDM4A associates with translation machinery and regulates protein synthesis. Cancer Discovery. 5: 255-63. PMID 25564516 DOI: 10.1158/2159-8290.Cd-14-1326  0.669
2015 Black JC, Atabakhsh E, Kim J, Biette KM, Van Rechem C, Ladd B, Burrowes PD, Donado C, Mattoo H, Kleinstiver BP, Song B, Andriani G, Keith Joung J, Iliopoulos O, Montagna C, et al. Hypoxia drives transient site-specific copy gain and drug-resistant gene expression Genes and Development. 29: 1018-1031. DOI: 10.1101/gad.259796.115  0.596
2014 Black JC, Cheney PP, Campbell T, Knowles MK. Membrane curvature based lipid sorting using a nanoparticle patterned substrate. Soft Matter. 10: 2016-23. PMID 24652483 DOI: 10.1039/C3Sm52522H  0.622
2013 Javaid S, Zhang J, Anderssen E, Black JC, Wittner BS, Tajima K, Ting DT, Smolen GA, Zubrowski M, Desai R, Maheswaran S, Ramaswamy S, Whetstine JR, Haber DA. Dynamic chromatin modification sustains epithelial-mesenchymal transition following inducible expression of Snail-1. Cell Reports. 5: 1679-89. PMID 24360956 DOI: 10.1016/J.Celrep.2013.11.034  0.651
2013 Rottiers V, Obad S, Petri A, McGarrah R, Lindholm MW, Black JC, Sinha S, Goody RJ, Lawrence MS, deLemos AS, Hansen HF, Whittaker S, Henry S, Brookes R, Najafi-Shoushtari SH, et al. Pharmacological inhibition of a microRNA family in nonhuman primates by a seed-targeting 8-mer antimiR. Science Translational Medicine. 5: 212ra162. PMID 24259050 DOI: 10.1126/Scitranslmed.3006840  0.616
2013 Black JC, Manning AL, Van Rechem C, Kim J, Ladd B, Cho J, Pineda CM, Murphy N, Daniels DL, Montagna C, Lewis PW, Glass K, Allis CD, Dyson NJ, Getz G, et al. KDM4A lysine demethylase induces site-specific copy gain and rereplication of regions amplified in tumors. Cell. 154: 541-55. PMID 23871696 DOI: 10.1016/J.Cell.2013.06.051  0.667
2013 Black JC, Whetstine JR. Tipping the lysine methylation balance in disease. Biopolymers. 99: 127-35. PMID 23175387 DOI: 10.1002/Bip.22136  0.664
2012 Black JC, Van Rechem C, Whetstine JR. Histone lysine methylation dynamics: establishment, regulation, and biological impact. Molecular Cell. 48: 491-507. PMID 23200123 DOI: 10.1016/J.Molcel.2012.11.006  0.669
2012 Black JC, Whetstine JR. LOX out, histones: a new enzyme is nipping at your tails. Molecular Cell. 46: 243-4. PMID 22578539 DOI: 10.1016/J.Molcel.2012.04.023  0.651
2011 Van Rechem C, Black JC, Abbas T, Allen A, Rinehart CA, Yuan GC, Dutta A, Whetstine JR. The SKP1-Cul1-F-box and leucine-rich repeat protein 4 (SCF-FbxL4) ubiquitin ligase regulates lysine demethylase 4A (KDM4A)/Jumonji domain-containing 2A (JMJD2A) protein. The Journal of Biological Chemistry. 286: 30462-70. PMID 21757720 DOI: 10.1074/Jbc.M111.273508  0.668
2011 Wang MS, Black JC, Knowles MK, Reed SM. C-reactive protein (CRP) aptamer binds to monomeric but not pentameric form of CRP. Analytical and Bioanalytical Chemistry. 401: 1309-18. PMID 21725632 DOI: 10.1007/S00216-011-5174-1  0.644
2011 Black JC, Whetstine JR. Chromatin landscape: methylation beyond transcription. Epigenetics. 6: 9-15. PMID 20855937 DOI: 10.4161/Epi.6.1.13331  0.689
2010 Black JC, Allen A, Van Rechem C, Forbes E, Longworth M, Tschöp K, Rinehart C, Quiton J, Walsh R, Smallwood A, Dyson NJ, Whetstine JR. Conserved antagonism between JMJD2A/KDM4A and HP1γ during cell cycle progression. Molecular Cell. 40: 736-48. PMID 21145482 DOI: 10.1016/J.Molcel.2010.11.008  0.68
2010 Walker AK, Yang F, Jiang K, Ji JY, Watts JL, Purushotham A, Boss O, Hirsch ML, Ribich S, Smith JJ, Israelian K, Westphal CH, Rodgers JT, Shioda T, Elson SL, ... ... Black JC, et al. Conserved role of SIRT1 orthologs in fasting-dependent inhibition of the lipid/cholesterol regulator SREBP. Genes & Development. 24: 1403-17. PMID 20595232 DOI: 10.1101/Gad.1901210  0.617
2009 Ramirez-Carrozzi VR, Braas D, Bhatt DM, Cheng CS, Hong C, Doty KR, Black JC, Hoffmann A, Carey M, Smale ST. A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling. Cell. 138: 114-28. PMID 19596239 DOI: 10.1016/J.Cell.2009.04.020  0.375
2008 Black JC, Mosley A, Kitada T, Washburn M, Carey M. The SIRT2 deacetylase regulates autoacetylation of p300. Molecular Cell. 32: 449-55. PMID 18995842 DOI: 10.1016/J.Molcel.2008.09.018  0.316
2008 Smallwood A, Black JC, Tanese N, Pradhan S, Carey M. HP1-mediated silencing targets Pol II coactivator complexes. Nature Structural & Molecular Biology. 15: 318-20. PMID 18264112 DOI: 10.1038/Nsmb.1385  0.36
2006 Black JC, Choi JE, Lombardo SR, Carey M. A mechanism for coordinating chromatin modification and preinitiation complex assembly. Molecular Cell. 23: 809-18. PMID 16973433 DOI: 10.1016/J.Molcel.2006.07.018  0.383
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