Bert Ely - Publications

Affiliations: 
Biological Sciences University of South Carolina, Columbia, SC 
Area:
Bioinformatics Biology, Genetics, Evolution and Development Biology

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ely B, Liese J, Corley S, Nguyen D, Wilson K, Berrios L. Novel Caulobacter bacteriophages illustrate the diversity of the podovirus genus Rauchvirus. Archives of Virology. PMID 32870405 DOI: 10.1007/S00705-020-04791-4  0.341
2020 Wilson K, Zhu F, Zheng R, Chen S, Ely B. Identification of proteins associated with two diverse Caulobacter phicbkvirus particles. Archives of Virology. PMID 32588241 DOI: 10.1007/S00705-020-04707-2  0.393
2020 Ely B. Recombination and gene loss occur simultaneously during bacterial horizontal gene transfer. Plos One. 15: e0227987. PMID 31990919 DOI: 10.1371/Journal.Pone.0227987  0.419
2019 Berrios L, Ely B. The Isolation and Characterization of Kronos, a Novel Caulobacter Rhizosphere Phage that is Similar to Lambdoid Phages. Current Microbiology. PMID 30810780 DOI: 10.1007/S00284-019-01656-1  0.366
2019 Wilson K, Ely B. Analyses of four new Caulobacter Phicbkviruses indicate independent lineages. The Journal of General Virology. PMID 30657445 DOI: 10.1099/Jgv.0.001218  0.399
2019 Leclerc GM, Han K, Leclerc GJ, Ely B. Characterization of a Highly Repetitive Sequence Conserved Among the North American Morone Species. Marine Biotechnology (New York, N.Y.). 1: 122-130. PMID 10373620 DOI: 10.1007/Pl00011759  0.328
2018 Ely B, Wilson K, Ross K, Ingram D, Lewter T, Herring J, Duncan D, Aikins A, Scott D. Genome Comparisons of Wild Isolates of Caulobacter crescentus Reveal Rates of Inversion and Horizontal Gene Transfer. Current Microbiology. PMID 30483871 DOI: 10.1007/S00284-018-1606-X  0.371
2018 Berrios L, Ely B. Achieving Accurate Sequence and Annotation Data for Caulobacter vibrioides CB13. Current Microbiology. PMID 30259084 DOI: 10.1007/S00284-018-1572-3  0.396
2018 Nguyen D, Ely B. A Genome Comparison of T7-like Podoviruses That Infect Caulobacter crescentus. Current Microbiology. PMID 29423729 DOI: 10.1007/S00284-018-1445-9  0.398
2017 Ash KT, Drake KM, Gibbs WS, Ely B. Genomic Diversity of Type B3 Bacteriophages of Caulobacter crescentus. Current Microbiology. PMID 28393265 DOI: 10.1007/S00284-017-1248-4  0.375
2016 Scott D, Ely B. Conservation of the Essential Genome Among Caulobacter and Brevundimonas Species. Current Microbiology. PMID 26750121 DOI: 10.1007/S00284-015-0964-X  0.38
2015 Callahan CT, Wilson KM, Ely B. Characterization of the Proteins Associated with Caulobacter crescentus Bacteriophage CbK Particles. Current Microbiology. PMID 26459165 DOI: 10.1007/S00284-015-0922-7  0.661
2015 Ely B, Gibbs W, Diez S, Ash K. The Caulobacter crescentus transducing phage Cr30 is a unique member of the T4-like family of myophages. Current Microbiology. 70: 854-8. PMID 25773204 DOI: 10.1007/S00284-015-0799-5  0.328
2015 Patel S, Fletcher B, Scott DC, Ely B. Genome sequence and phenotypic characterization of Caulobacter segnis. Current Microbiology. 70: 355-63. PMID 25398322 DOI: 10.1007/S00284-014-0726-1  0.364
2015 Scott D, Ely B. Comparison of genome sequencing technology and assembly methods for the analysis of a GC-rich bacterial genome. Current Microbiology. 70: 338-44. PMID 25377284 DOI: 10.1007/S00284-014-0721-6  0.347
2014 Ash K, Brown T, Watford T, Scott LE, Stephens C, Ely B. A comparison of the Caulobacter NA1000 and K31 genomes reveals extensive genome rearrangements and differences in metabolic potential. Open Biology. 4. PMID 25274120 DOI: 10.1098/Rsob.140128  0.365
2014 Ely B, Scott LE. Correction of the Caulobacter crescentus NA1000 genome annotation. Plos One. 9: e91668. PMID 24621776 DOI: 10.1371/Journal.Pone.0091668  0.373
2012 Friedman R, Ely B. Codon usage methods for horizontal gene transfer detection generate an abundance of false positive and false negative results. Current Microbiology. 65: 639-42. PMID 23010940 DOI: 10.1007/S00284-012-0205-5  0.354
2011 Lightfield J, Fram NR, Ely B. Across bacterial phyla, distantly-related genomes with similar genomic GC content have similar patterns of amino acid usage. Plos One. 6: e17677. PMID 21423704 DOI: 10.1371/Journal.Pone.0017677  0.352
2010 Liu JX, Ely B. Evolution of an MHC class Ia gene fragment in four North American Morone species Journal of Fish Biology. 76: 1984-1994. PMID 20557651 DOI: 10.1111/J.1095-8649.2010.02588.X  0.357
2010 Purucker M, Bryan R, Amemiya K, Ely B, Shapiro L. Isolation of a Caulobacter gene cluster specifying flagellum production by using nonmotile Tn5 insertion mutants. Proceedings of the National Academy of Sciences of the United States of America. 79: 6797-801. PMID 16593248 DOI: 10.1073/Pnas.79.22.6797  0.384
2009 Liu JX, Ely B. Complex evolution of a highly conserved microsatellite locus in several fish species Journal of Fish Biology. 75: 442-447. PMID 20738549 DOI: 10.1111/J.1095-8649.2009.02340.X  0.325
2006 Ely B, Wilson JL, Jackson F, Jackson BA. African-American mitochondrial DNAs often match mtDNAs found in multiple African ethnic groups. Bmc Biology. 4: 34. PMID 17038170 DOI: 10.1186/1741-7007-4-34  0.331
2005 Alvarado Bremer JR, Viñas J, Mejuto J, Ely B, Pla C. Comparative phylogeography of Atlantic bluefin tuna and swordfish: the combined effects of vicariance, secondary contact, introgression, and population expansion on the regional phylogenies of two highly migratory pelagic fishes. Molecular Phylogenetics and Evolution. 36: 169-87. PMID 15904864 DOI: 10.1016/J.Ympev.2004.12.011  0.376
2005 Jackson BA, Wilson JL, Kirbah S, Sidney SS, Rosenberger J, Bassie L, Alie JA, McLean DC, Garvey WT, Ely B. Mitochondrial DNA genetic diversity among four ethnic groups in Sierra Leone. American Journal of Physical Anthropology. 128: 156-63. PMID 15761855 DOI: 10.1002/Ajpa.20040  0.344
2005 Ely B, Viñas J, Alvarado Bremer JR, Black D, Lucas L, Covello K, Labrie AV, Thelen E. Consequences of the historical demography on the global population structure of two highly migratory cosmopolitan marine fishes: the yellowfin tuna (Thunnus albacares) and the skipjack tuna (Katsuwonus pelamis). Bmc Evolutionary Biology. 5: 19. PMID 15725349 DOI: 10.1186/1471-2148-5-19  0.304
2005 Alvarado Bremer JR, Mejuto J, Gómez-Márquez J, Boán F, Carpintero P, Rodríguez JM, Viñas J, Greig TW, Ely B. Hierarchical analyses of genetic variation of samples from breeding and feeding grounds confirm the genetic partitioning of northwest Atlantic and South Atlantic populations of swordfish (Xiphias gladius L.) Journal of Experimental Marine Biology and Ecology. 327: 167-182. DOI: 10.1016/J.Jembe.2005.06.022  0.718
2004 Bulak JS, Thomason CS, Han K, Ely B. Genetic variation and management of striped bass populations in the coastal rivers of South Carolina North American Journal of Fisheries Management. 24: 1322-1329. DOI: 10.1577/M03-039.1  0.312
2002 Han K, Ely B. Use of AFLP analyses to assess genetic variation in Morone and Thunnus species. Marine Biotechnology (New York, N.Y.). 4: 141-5. PMID 14961273 DOI: 10.1007/S10126-001-0080-8  0.307
2002 Ely B, Stoner DS, Bremer AJ, Dean JM, Addis P, Cau A, Thelen EJ, Jones WJ, Black DE, Smith L, Scott K, Naseri I, Quattro JM. Analyses of nuclear ldhA gene and mtDNA control region sequences of Atlantic northern bluefin tuna populations. Marine Biotechnology (New York, N.Y.). 4: 583-8. PMID 14961233 DOI: 10.1007/S10126-002-0040-Y  0.406
2001 Han K, Woodin SA, Lincoln DE, Fielman KT, Ely B. Amphitrite ornata, a marine worm, contains two dehaloperoxidase genes. Marine Biotechnology (New York, N.Y.). 3: 287-92. PMID 14961367 DOI: 10.1007/S10126-001-0003-8  0.401
2001 Nierman WC, Feldblyum TV, Laub MT, Paulsen IT, Nelson KE, Eisen JA, Heidelberg JF, Alley MR, Ohta N, Maddock JR, Potocka I, Nelson WC, Newton A, Stephens C, Phadke ND, ... Ely B, et al. Complete genome sequence of Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America. 98: 4136-41. PMID 11259647 DOI: 10.1073/Pnas.061029298  0.404
2000 Han K, Li L, Leclerc GM, Hays AM, Ely B. Isolation and Characterization of Microsatellite Loci for Striped Bass (Morone saxatilis). Marine Biotechnology (New York, N.Y.). 2: 405-408. PMID 11246406 DOI: 10.1007/S101260000014  0.347
2000 Ely B, Ely TW, Crymes J, Minnich SA. A family of six flagellin genes contributes to the Caulobacter crescentus flagellar filament Journal of Bacteriology. 182: 5001-5004. PMID 10940048 DOI: 10.1128/Jb.182.17.5001-5004.2000  0.345
2000 Diaz M, Wethey D, Bulak J, Ely B. Effect of harvest and effective population size on genetic diversity in a striped bass population Transactions of the American Fisheries Society. 129: 1367-1372. DOI: 10.1577/1548-8659(2000)129<1367:Eohaep>2.0.Co;2  0.323
1999 Mangan EK, Malakooti J, Caballero A, Anderson P, Ely B, Gober JW. FlbT couples flagellum assembly to gene expression in Caulobacter crescentus. Journal of Bacteriology. 181: 6160-70. PMID 10498731 DOI: 10.1128/Jb.181.19.6160-6170.1999  0.33
1999 Crymes WB, Zhang D, Ely B. Regulation of podJ expression during the Caulobacter crescentus cell cycle Journal of Bacteriology. 181: 3967-3973. PMID 10383964 DOI: 10.1128/Jb.181.13.3967-3973.1999  0.305
1998 Leclerc G, Wang SP, Ely B. A new class of Caulobacter crescentus flagellar genes Journal of Bacteriology. 180: 5010-5019. PMID 9748431 DOI: 10.1128/Jb.180.19.5010-5019.1998  0.351
1998 Alvarado Bremer JR, Zhang L, Bulak JS, Ely B. A polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay for the discrimination of mitochondrial DNA from the Florida and northern subspecies of largemouth bass Transactions of the American Fisheries Society. 127: 507-511. DOI: 10.1577/1548-8659(1998)127<0507:Apcrnr>2.0.Co;2  0.312
1998 Alvarado Bremer JR, Stequert B, Robertson NW, Ely B. Genetic evidence for inter-oceanic subdivision of bigeye tuna (Thunnus obesus) populations Marine Biology. 132: 547-557. DOI: 10.1007/S002270050420  0.42
1997 Mullin DA, Zies DL, Mullin AH, Caballera N, Ely B. Genetic organization and transposition properties of IS511. Molecular & General Genetics : Mgg. 254: 456-63. PMID 9180700 DOI: 10.1007/S004380050439  0.382
1997 Alvarado Bremer JR, Naseri I, Ely B. Othodox and unorthodox phylogenetic relationships among tunas revealed by the nucleotide sequence analysis of the mitochondrial DNA control region Journal of Fish Biology. 50: 540-554. DOI: 10.1111/J.1095-8649.1997.Tb01948.X  0.37
1996 Leclerc GM, Ely B, Xu XL, Harrell RM. Gynogen production in hybrid striped bass Journal of the World Aquaculture Society. 27: 119-125. DOI: 10.1111/J.1749-7345.1996.Tb00602.X  0.389
1996 Bremer JRA, Mejuto J, Greig TW, Ely B. Global population structure of the swordfish (Xiphias gladius L.) as revealed by analysis of the mitochondrial DNA control region Journal of Experimental Marine Biology and Ecology. 197: 295-310. DOI: 10.1016/0022-0981(95)00164-6  0.723
1995 Shui Ping Wang, Pil Jung Kang, Yung Ping Chen, Ely B. Synthesis of the Caulobacter ferredoxin protein, FdxA, is cell cycle controlled Journal of Bacteriology. 177: 2901-2907. PMID 7751303 DOI: 10.1128/Jb.177.10.2901-2907.1995  0.376
1995 Malakooti J, Ely B. Principal sigma subunit of the Caulobacter crescentus RNA polymerase Journal of Bacteriology. 177: 6854-6860. PMID 7592478 DOI: 10.1128/Jb.177.23.6854-6860.1995  0.349
1995 Malakooti J, Shui Ping Wang, Ely B. A consensus promoter sequence for Caulobacter crescentus genes involved in biosynthetic and housekeeping functions Journal of Bacteriology. 177: 4372-4376. PMID 7543475 DOI: 10.1128/Jb.177.15.4372-4376.1995  0.405
1995 Woods LC, Ely B, Leclerc G, Harrell RM. Evidence for genetic purity of captive and domestic striped bass broodstocks Aquaculture. 137: 41-44. DOI: 10.1016/0044-8486(95)01097-1  0.326
1994 Yun C, Ely B, Smit J. Identification of genes affecting production of the adhesive holdfast of a marine caulobacter Journal of Bacteriology. 176: 796-803. PMID 8300533 DOI: 10.1128/Jb.176.3.796-803.1994  0.377
1994 Malakooti J, Ely B, Matsumura P. Molecular characterization, nucleotide sequence, and expression of the fliO, fliP, fliQ, and fliR genes of Escherichia coli. Journal of Bacteriology. 176: 189-97. PMID 8282695 DOI: 10.1128/Jb.176.1.189-197.1994  0.43
1994 Tarleton JC, Malakooti J, Ely B. Regulation of Caulobacter crescentus ilvBN gene expression Journal of Bacteriology. 176: 3765-3774. PMID 8206855 DOI: 10.1128/Jb.176.12.3765-3774.1994  0.373
1994 Malakooti J, Ely B. Identification and characterization of the ilvR gene encoding a LysR-type regulator of Caulobacter crescentus Journal of Bacteriology. 176: 1275-1281. PMID 8113165 DOI: 10.1128/Jb.176.5.1275-1281.1994  0.419
1993 Wang SP, Sharma PL, Schoenlein PV, Ely B. A histidine protein kinase is involved in polar organelle development in Caulobacter crescentus Proceedings of the National Academy of Sciences of the United States of America. 90: 630-634. PMID 8421698 DOI: 10.1073/Pnas.90.2.630  0.375
1992 Khambaty FM, Ely B. Molecular genetics of the flgI region and its role in flagellum biosynthesis in Caulobacter crescentus Journal of Bacteriology. 174: 4101-4109. PMID 1597425 DOI: 10.1128/Jb.174.12.4101-4109.1992  0.387
1992 Schoenlein PV, Lui J, Gallman L, Ely B. The Caulobacter crescentus flaFG region regulates synthesis and assembly of flagellin proteins encoded by two genetically unlinked gene clusters Journal of Bacteriology. 174: 6046-6053. PMID 1400155 DOI: 10.1128/Jb.174.19.6046-6053.1992  0.389
1991 Tarleton JC, Ely B. Isolation and characterization of ilvA, ilvBN, and ilvD mutants of Caulobacter crescentus Journal of Bacteriology. 173: 1259-1267. PMID 1991719 DOI: 10.1128/Jb.173.3.1259-1267.1991  0.39
1991 Ely B. [17] Genetics of Caulobacter crescentus Methods in Enzymology. 204: 372-384. PMID 1658564 DOI: 10.1016/0076-6879(91)04019-K  0.304
1990 Steinman HM, Ely B. Copper-zinc superoxide dismutase of Caulobacter crescentus: Cloning, sequencing, and mapping of the gene and periplasmic location of the enzyme Journal of Bacteriology. 172: 2901-2910. PMID 2345128 DOI: 10.1128/Jb.172.6.2901-2910.1990  0.344
1990 Driks A, Schoenlein PV, DeRosier DJ, Shapiro L, Ely B. A Caulobacter gene involved in polar morphogenesis. Journal of Bacteriology. 172: 2113-23. PMID 2318810 DOI: 10.1128/Jb.172.4.2113-2123.1990  0.301
1990 Ely B, Ely TW, Gerardot CJ, Dingwall A. Circularity of the Caulobacter crescentus chromosome determined by pulsed-field gel electrophoresis Journal of Bacteriology. 172: 1262-1266. PMID 2155197 DOI: 10.1128/Jb.172.3.1262-1266.1990  0.37
1990 Ohta N, Mullin DA, Tarleton J, Ely B, Newton A. Identification, distribution, and sequence analysis of new insertion elements in Caulobacter crescentus Journal of Bacteriology. 172: 236-242. PMID 2152901 DOI: 10.1128/Jb.172.1.236-242.1990  0.39
1990 Schoenlein PV, Gallman LS, Winkler ME, Ely B. Nucleotide sequence of the Caulobacter crescents flaF and flbt genes and analysis of codon usage in organisms with G+C-rich genomes Gene. 93: 17-25. PMID 1699845 DOI: 10.1016/0378-1119(90)90130-J  0.413
1990 Dingwall A, Shapiro L, Ely B. Analysis of bacterial genome organization and replication using pulsed-field gel electrophoresis Methods. 1: 160-168. DOI: 10.1016/S1046-2023(05)80131-8  0.363
1989 Schoenlein PV, Gallman LS, Ely B. Organization of the flaFG gene cluster and identification of two additional genes involved in flagellum biogenesis in Caulobacter crescentus Journal of Bacteriology. 171: 1544-1553. PMID 2921244 DOI: 10.1128/Jb.171.3.1544-1553.1989  0.383
1989 Schoenlein PV, Ely B. Characterization of strains containing mutations in the contiguous flaF, flbT, or flbA-flaG transcription unit and identification of a novel Fla phenotype in Caulobacter crescentus Journal of Bacteriology. 171: 1554-1561. PMID 2646286 DOI: 10.1128/Jb.171.3.1554-1561.1989  0.328
1988 Schoenlein PV, Gallman LM, Ely B. Use of transmissible plasmids as cloning vectors in Caulobacter crescentus Gene. 70: 321-329. PMID 3215520 DOI: 10.1016/0378-1119(88)90204-1  0.376
1988 Ely B, Gerardot CJ. Use of pulsed-field-gradient gel electrophoresis to construct a physical map of the Caulobacter crescentus genome Gene. 68: 323-333. PMID 2851498 DOI: 10.1016/0378-1119(88)90035-2  0.346
1987 Bryan R, Champer R, Gomes S, Ely B, Shapiro L. Separation of temporal control and trans-acting modulation of flagellin and chemotaxis genes in Caulobacter Mgg Molecular &Amp; General Genetics. 206: 300-306. PMID 3473275 DOI: 10.1007/Bf00333588  0.344
1984 Ohta N, Swanson E, Ely B, Newton A. Physical mapping and complementation analysis of transposon Tn5 mutations in Caulobacter crescentus: Organization of transcriptional units in the hook gene cluster Journal of Bacteriology. 158: 897-904. PMID 6327646 DOI: 10.1128/Jb.158.3.897-904.1984  0.379
1984 Winkler ME, Schoenlein PV, Ross CM, Barrett JT, Ely B. Genetic and physical analyses of Caulobacter rescentus trp genes Journal of Bacteriology. 160: 279-287. PMID 6090420 DOI: 10.1128/Jb.160.1.279-287.1984  0.362
1983 Johnson RC, Ferber DM, Ely B. Synthesis and assembly of flagellar components by Caulobacter crescentus motility mutants. Journal of Bacteriology. 154: 1137-1144. DOI: 10.1128/Jb.154.3.1137-1144.1983  0.354
1982 Barrett JT, Croft RH, Ferber DM, Gerardot CJ, Schoenlein PV, Ely B. Genetic mapping with Tn5-derived auxotrophs of Caulobacter crescentus. Journal of Bacteriology. 151: 888-98. PMID 6284715 DOI: 10.1128/Jb.151.2.888-898.1982  0.348
1982 Ely B, Croft RH. Transposon mutagenesis in Caulobacter crescentus. Journal of Bacteriology. 149: 620-5. PMID 6276364 DOI: 10.1128/Jb.149.2.620-625.1982  0.332
1977 Johnson RC, Wood NB, Ely B. Isolation and Characterization of Bacteriophages for Caulobacter crescentus Journal of General Virology. 37: 323-335. DOI: 10.1099/0022-1317-37-2-323  0.321
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