Markus Friedrich, Ph.D. - Publications

Affiliations: 
Biological Science Wayne State University, Detroit, MI, United States 

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Chen Q, Sasikala-Appukuttan AK, Husain Z, Shrivastava A, Spain M, Sendler ED, Daines B, Fischer S, Chen R, Cook TA, Friedrich M. Global gene expression analysis reveals complex cuticle organization of the Tribolium compound eye. Genome Biology and Evolution. PMID 36575057 DOI: 10.1093/gbe/evac181  0.414
2022 Friedrich M. Coming into clear sight at last: Ancestral and derived events during chelicerate visual system development. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 44: e2200163. PMID 36317531 DOI: 10.1002/bies.202200163  0.36
2021 Friedrich M. Deep Conservation of -Like RHG Gene Family Homologs in Winged Insects Revealed by "Taxon Hopping" BLAST. Insects. 12. PMID 34821758 DOI: 10.3390/insects12110957  0.307
2020 Bao R, Friedrich M. Genomic signatures of globally enhanced gene duplicate accumulation in the megadiverse higher Diptera fueling intralocus sexual conflict resolution. Peerj. 8: e10012. PMID 33083121 DOI: 10.7717/peerj.10012  0.597
2020 Wu M, Bao R, Friedrich M. Evolutionary conservation of opsin gene expression patterns in the compound eyes of darkling beetles. Development Genes and Evolution. PMID 33006642 DOI: 10.1007/s00427-020-00669-2  0.624
2020 Jasti N, Sebagh D, Riaz M, Wang X, Koripella B, Palanisamy V, Mohammad N, Chen Q, Friedrich M. Towards reconstructing the dipteran demise of an ancient essential gene: E3 ubiquitin ligase Murinedouble minute. Development Genes and Evolution. PMID 32623522 DOI: 10.1007/S00427-020-00663-8  0.47
2020 Zelhof AC, Mahato S, Liang X, Rylee J, Bergh E, Feder LE, Larsen ME, Britt SG, Friedrich M. The brachyceran de novo gene PIP82, a phosphorylation target of aPKC, is essential for proper formation and maintenance of the rhabdomeric photoreceptor apical domain in Drosophila. Plos Genetics. 16: e1008890. PMID 32579558 DOI: 10.1371/Journal.Pgen.1008890  0.334
2020 Oeyen JP, Baa-Puyoulet P, Benoit JB, Beukeboom LW, Bornberg-Bauer E, Buttstedt A, Calevro F, Cash EI, Chao H, Charles H, Chen MM, Childers C, Cridge AG, Dearden P, Dinh H, ... ... Friedrich M, et al. Sawfly genomes reveal evolutionary acquisitions that fostered the mega-radiation of parasitoid and eusocial Hymenoptera. Genome Biology and Evolution. PMID 32442304 DOI: 10.1093/Gbe/Evaa106  0.419
2020 Sparks ME, Bansal R, Benoit JB, Blackburn MB, Chao H, Chen M, Cheng S, Childers C, Dinh H, Doddapaneni HV, Dugan S, Elpidina EN, Farrow DW, Friedrich M, Gibbs RA, et al. Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. Bmc Genomics. 21: 227. PMID 32171258 DOI: 10.1186/S12864-020-6510-7  0.354
2020 Thomas GWC, Dohmen E, Hughes DST, Murali SC, Poelchau M, Glastad K, Anstead CA, Ayoub NA, Batterham P, Bellair M, Binford GJ, Chao H, Chen YH, Childers C, Dinh H, ... ... Friedrich M, et al. Gene content evolution in the arthropods. Genome Biology. 21: 15. PMID 31969194 DOI: 10.1186/S13059-019-1925-7  0.4
2020 Herndon N, Shelton J, Gerischer L, Ioannidis P, Ninova M, Dönitz J, Waterhouse RM, Liang C, Damm C, Siemanowski J, Kitzmann P, Ulrich J, Dippel S, Oberhofer G, Hu Y, ... ... Friedrich M, et al. Enhanced genome assembly and a new official gene set for Tribolium castaneum. Bmc Genomics. 21: 47. PMID 31937263 DOI: 10.1186/S12864-019-6394-6  0.394
2019 Panfilio KA, Vargas Jentzsch IM, Benoit JB, Erezyilmaz D, Suzuki Y, Colella S, Robertson HM, Poelchau MF, Waterhouse RM, Ioannidis P, Weirauch MT, Hughes DST, Murali SC, Werren JH, Jacobs CGC, ... ... Friedrich M, et al. Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. Genome Biology. 20: 64. PMID 30935422 DOI: 10.1186/S13059-019-1660-0  0.369
2019 Leray VL, Caravas J, Friedrich M, Zigler KS. Mitochondrial sequence data indicate “Vicariance by Erosion” as a mechanism of species diversification in North American Ptomaphagus (Coleoptera, Leiodidae, Cholevinae) cave beetles Subterranean Biology. 29: 35-57. DOI: 10.3897/Subtbiol.29.31377  0.74
2018 Armisén D, Rajakumar R, Friedrich M, Benoit JB, Robertson HM, Panfilio KA, Ahn SJ, Poelchau MF, Chao H, Dinh H, Doddapaneni HV, Dugan S, Gibbs RA, Hughes DST, Han Y, et al. The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. Bmc Genomics. 19: 832. PMID 30463532 DOI: 10.1186/S12864-018-5163-2  0.332
2018 Friedrich M, Chahine H, Al-Jageta C, Badreddine H. Massive parallel expansions of Methuselah/Methuselah-like receptors in schizophoran Diptera. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 30058118 DOI: 10.1002/Jez.B.22813  0.402
2018 Poynton HC, Hasenbein S, Benoit JB, Sepulveda MS, Poelchau MF, Hughes DST, Murali SC, Chen S, Glastad KM, Goodisman MAD, Werren JH, Vineis JH, Bowen JL, Friedrich M, Jones J, et al. The Toxicogenome of Hyalella azteca: a model for sediment ecotoxicology and evolutionary toxicology. Environmental Science & Technology. PMID 29634279 DOI: 10.1021/Acs.Est.8B00837  0.47
2018 Schoville SD, Chen YH, Andersson MN, Benoit JB, Bhandari A, Bowsher JH, Brevik K, Cappelle K, Chen MM, Childers AK, Childers C, Christiaens O, Clements J, Didion EM, Elpidina EN, ... ... Friedrich M, et al. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Scientific Reports. 8: 1931. PMID 29386578 DOI: 10.1038/S41598-018-20154-1  0.303
2018 Bao R, Dia SE, Issa HA, Alhusein D, Friedrich M. Comparative Evidence of an Exceptional Impact of Gene Duplication on the Developmental Evolution of Drosophila and the Higher Diptera Frontiers in Ecology and Evolution. 6. DOI: 10.3389/Fevo.2018.00063  0.664
2017 Friedrich M. Ancient genetic redundancy of eyeless and twin of eyeless in the arthropod ocular segment. Developmental Biology. PMID 28993201 DOI: 10.1016/J.Ydbio.2017.10.001  0.502
2017 Papanicolaou A, Schetelig MF, Arensburger P, Atkinson PW, Benoit JB, Bourtzis K, Castañera P, Cavanaugh JP, Chao H, Childers C, Curril I, Dinh H, Doddapaneni H, Dolan A, Dugan S, ... Friedrich M, et al. Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species. Genome Biology. 18: 11. PMID 28100280 DOI: 10.1186/S13059-017-1155-9  0.397
2017 Friedrich M, Jones JW. Gene Ages, Nomenclatures, and Functional Diversification of the Methuselah/Methuselah-Like GPCR Family in Drosophila and Tribolium. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 28074535 DOI: 10.1002/Jez.B.22721  0.442
2017 Tierney SM, Friedrich M, Humphreys WF, Jones TM, Warrant EJ, Wcislo WT. Consequences of evolutionary transitions in changing photic environments Austral Entomology. 56: 23-46. DOI: 10.1111/Aen.12264  0.317
2016 McKenna DD, Scully ED, Pauchet Y, Hoover K, Kirsch R, Geib SM, Mitchell RF, Waterhouse RM, Ahn SJ, Arsala D, Benoit JB, Blackmon H, Bledsoe T, Bowsher JH, Busch A, ... ... Friedrich M, et al. Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations at the beetle-plant interface. Genome Biology. 17: 227. PMID 27832824 DOI: 10.1186/S13059-016-1088-8  0.405
2016 Zhou Q, Yu L, Friedrich M, Pignoni F. Distinct regulation of atonal in a visual organ of Drosophila: organ-specific enhancer and lack of autoregulation in the larval eye. Developmental Biology. PMID 27693434 DOI: 10.1016/J.Ydbio.2016.09.023  0.412
2016 Zhou Q, DeSantis DF, Friedrich M, Pignoni F. Shared and distinct mechanisms of atonal regulation in Drosophila ocelli and compound eyes. Developmental Biology. PMID 27565023 DOI: 10.1016/J.Ydbio.2016.08.025  0.387
2016 Friedrich M, Cook T, Zelhof AC. Ancient default activators of terminal photoreceptor differentiation in the pancrustacean compound eye: the homeodomain transcription factors Otd and Pph13. Current Opinion in Insect Science. 13: 33-42. PMID 27436551 DOI: 10.1016/J.Cois.2015.10.006  0.423
2016 de Mendoza A, Jones JW, Friedrich M. Methuselah/Methuselah-like G protein-coupled receptors constitute an ancient metazoan gene family. Scientific Reports. 6: 21801. PMID 26915348 DOI: 10.1038/Srep21801  0.437
2015 Friedrich M. Evo-Devo gene toolkit update: at least seven Pax transcription factor subfamilies in the last common ancestor of bilaterian animals. Evolution & Development. 17: 255-7. PMID 26372059 DOI: 10.1111/Ede.12137  0.388
2015 Zhao C, Escalante LN, Chen H, Benatti TR, Qu J, Chellapilla S, Waterhouse RM, Wheeler D, Andersson MN, Bao R, Batterton M, Behura SK, Blankenburg KP, Caragea D, Carolan JC, ... ... Friedrich M, et al. A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor. Current Biology : Cb. 25: 613-20. PMID 25660540 DOI: 10.1016/J.Cub.2014.12.057  0.553
2014 Luan Q, Chen Q, Friedrich M. The Pax6 genes eyeless and twin of eyeless are required for global patterning of the ocular segment in the Tribolium embryo. Developmental Biology. 394: 367-81. PMID 25149513 DOI: 10.1016/J.Ydbio.2014.08.005  0.446
2014 Mahato S, Morita S, Tucker AE, Liang X, Jackowska M, Friedrich M, Shiga Y, Zelhof AC. Common transcriptional mechanisms for visual photoreceptor cell differentiation among Pancrustaceans. Plos Genetics. 10: e1004484. PMID 24991928 DOI: 10.1371/Journal.Pgen.1004484  0.433
2013 Friedrich M. Biological clocks and visual systems in cave-adapted animals at the dawn of speleogenomics. Integrative and Comparative Biology. 53: 50-67. PMID 23720528 DOI: 10.1093/Icb/Ict058  0.403
2013 Caravas J, Friedrich M. Shaking the Diptera tree of life: Performance analysis of nuclear and mitochondrial sequence data partitions Systematic Entomology. 38: 93-103. DOI: 10.1111/J.1365-3113.2012.00657.X  0.743
2013 Friedrich M, Dong Y, Liu Z, Yang I. Genetic regulation of early eye development in non-dipteran insects Molecular Genetics of Axial Patterning, Growth and Disease in the Drosophila Eye. 295-328. DOI: 10.1007/978-1-4614-8232-1_11  0.412
2012 Patel MV, Hallal DA, Jones JW, Bronner DN, Zein R, Caravas J, Husain Z, Friedrich M, Vanberkum MF. Dramatic expansion and developmental expression diversification of the methuselah gene family during recent Drosophila evolution. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 318: 368-87. PMID 22711569 DOI: 10.1002/Jez.B.22453  0.767
2012 Bao R, Fischer T, Bolognesi R, Brown SJ, Friedrich M. Parallel duplication and partial subfunctionalization of β-catenin/armadillo during insect evolution. Molecular Biology and Evolution. 29: 647-62. PMID 21890476 DOI: 10.1093/Molbev/Msr219  0.563
2011 Friedrich M, Chen R, Daines B, Bao R, Caravas J, Rai PK, Zagmajster M, Peck SB. Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave. The Journal of Experimental Biology. 214: 3532-41. PMID 21993781 DOI: 10.1242/Jeb.060368  0.788
2011 Friedrich M. Drosophila as a developmental paradigm of regressive brain evolution: proof of principle in the visual system. Brain, Behavior and Evolution. 78: 199-215. PMID 21893944 DOI: 10.1159/000329850  0.345
2011 Friedrich M, Wood EJ, Wu M. Developmental evolution of the insect retina: insights from standardized numbering of homologous photoreceptors. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 316: 484-99. PMID 21796775 DOI: 10.1002/Jez.B.21424  0.406
2011 Friedrich M, Caravas J. New insights from hemichordate genomes: prebilaterian origin and parallel modifications in the paired domain of the Pax gene eyegone. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 316: 387-92. PMID 21506261 DOI: 10.1002/Jez.B.21412  0.745
2011 Zarinkamar N, Yang X, Bao R, Friedrich F, Beutel R, Friedrich M. The Pax gene eyegone facilitates repression of eye development in Tribolium. Evodevo. 2: 8. PMID 21463500 DOI: 10.1186/2041-9139-2-8  0.705
2011 Wiegmann BM, Trautwein MD, Winkler IS, Barr NB, Kim JW, Lambkin C, Bertone MA, Cassel BK, Bayless KM, Heimberg AM, Wheeler BM, Peterson KJ, Pape T, Sinclair BJ, Skevington JH, ... ... Friedrich M, et al. Episodic radiations in the fly tree of life. Proceedings of the National Academy of Sciences of the United States of America. 108: 5690-5. PMID 21402926 DOI: 10.1073/Pnas.1012675108  0.735
2010 Caravas J, Friedrich M. Of mites and millipedes: recent progress in resolving the base of the arthropod tree. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 32: 488-95. PMID 20486135 DOI: 10.1002/Bies.201000005  0.721
2010 Dong Y, Friedrich M. Enforcing biphasic eye development in a directly developing insect by transient knockdown of single eye selector genes. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 314: 104-14. PMID 19637278 DOI: 10.1002/Jez.B.21313  0.538
2009 Yang X, Weber M, Zarinkamar N, Posnien N, Friedrich F, Wigand B, Beutel R, Damen WG, Bucher G, Klingler M, Friedrich M. Probing the Drosophila retinal determination gene network in Tribolium (II): The Pax6 genes eyeless and twin of eyeless. Developmental Biology. 333: 215-27. PMID 19527703 DOI: 10.1016/J.Ydbio.2009.06.013  0.607
2009 Yang X, Zarinkamar N, Bao R, Friedrich M. Probing the Drosophila retinal determination gene network in Tribolium (I): The early retinal genes dachshund, eyes absent and sine oculis. Developmental Biology. 333: 202-14. PMID 19324029 DOI: 10.1016/J.Ydbio.2009.02.040  0.705
2009 Bao R, Friedrich M. Molecular evolution of the Drosophila retinome: exceptional gene gain in the higher Diptera. Molecular Biology and Evolution. 26: 1273-87. PMID 19252076 DOI: 10.1093/Molbev/Msp039  0.679
2008 Friedrich M. Opsins and cell fate in the Drosophila Bolwig organ: tricky lessons in homology inference. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 30: 980-93. PMID 18800378 DOI: 10.1002/Bies.20803  0.485
2008 Bao R, Friedrich M. Conserved cluster organization of insect Runx genes. Development Genes and Evolution. 218: 567-74. PMID 18758811 DOI: 10.1007/S00427-008-0244-X  0.646
2008 Bao R, Friedrich M. Fast co-evolution of sevenless and bride of sevenless in endopterygote insects. Development Genes and Evolution. 218: 215-20. PMID 18392882 DOI: 10.1007/S00427-007-0201-0  0.589
2008 Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, ... ... Friedrich M, ... ... Friedrich M, et al. The genome of the model beetle and pest Tribolium castaneum. Nature. 452: 949-55. PMID 18362917 DOI: 10.1038/Nature06784  0.761
2008 Buschbeck EK, Friedrich M. Evolution of Insect Eyes: Tales of Ancient Heritage, Deconstruction, Reconstruction, Remodeling, and Recycling Evolution: Education and Outreach. 1: 448-462. DOI: 10.1007/S12052-008-0086-Z  0.418
2007 Jackowska M, Bao R, Liu Z, McDonald EC, Cook TA, Friedrich M. Genomic and gene regulatory signatures of cryptozoic adaptation: Loss of blue sensitive photoreceptors through expansion of long wavelength-opsin expression in the red flour beetle Tribolium castaneum. Frontiers in Zoology. 4: 24. PMID 18154648 DOI: 10.1186/1742-9994-4-24  0.643
2006 Friedrich M. Ancient mechanisms of visual sense organ development based on comparison of the gene networks controlling larval eye, ocellus, and compound eye specification in Drosophila. Arthropod Structure & Development. 35: 357-78. PMID 18089081 DOI: 10.1016/j.asd.2006.08.010  0.356
2006 Liu Z, Yang X, Dong Y, Friedrich M. Tracking down the "head blob": comparative analysis of wingless expression in the developing insect procephalon reveals progressive reduction of embryonic visual system patterning in higher insects. Arthropod Structure & Development. 35: 341-56. PMID 18089080 DOI: 10.1016/J.Asd.2006.07.003  0.645
2006 Friedrich M, Dong Y. Developmental evolution of insect metamorphosis: Transient silencing of eye selector genes in grasshopper nymphs mimics temporal dynamics of visual system development in higher insects Developmental Biology. 295: 417-418. DOI: 10.1016/J.Ydbio.2006.04.283  0.55
2006 Yang X, Friedrich M. Analysis of eye selector gene function in the visual system of the red flour beetle Tribolium castaneum Developmental Biology. 295: 417. DOI: 10.1016/J.Ydbio.2006.04.282  0.604
2005 Dong Y, Friedrich M. Nymphal RNAi: systemic RNAi mediated gene knockdown in juvenile grasshopper. Bmc Biotechnology. 5: 25. PMID 16202143 DOI: 10.1186/1472-6750-5-25  0.515
2005 Dong Y, Friedrich M. Comparative analysis of Wingless patterning in the embryonic grasshopper eye. Development Genes and Evolution. 215: 177-97. PMID 15747130 DOI: 10.1007/S00427-004-0465-6  0.561
2004 Liu Z, Friedrich M. The Tribolium homologue of glass and the evolution of insect larval eyes. Developmental Biology. 269: 36-54. PMID 15081356 DOI: 10.1016/J.Ydbio.2004.01.012  0.469
2003 Friedrich M. Evolution of insect eye development: first insights from fruit fly, grasshopper and flour beetle. Integrative and Comparative Biology. 43: 508-21. PMID 21680459 DOI: 10.1093/icb/43.4.508  0.376
2003 Dong Y, Dinan L, Friedrich M. The effect of manipulating ecdysteroid signaling on embryonic eye development in the locust Schistocerca americana. Development Genes and Evolution. 213: 587-600. PMID 14618403 DOI: 10.1007/S00427-003-0367-Z  0.504
2000 Friedrich M, Benzer S. Divergent decapentaplegic expression patterns in compound eye development and the evolution of insect metamorphosis. The Journal of Experimental Zoology. 288: 39-55. PMID 10750052 DOI: 10.1002/(SICI)1097-010X(20000415)288:1<39::AID-JEZ5>3.0.CO;2-T  0.655
1995 Friedrich M, Tautz D. Ribosomal DNA phylogeny of the major extant arthropod classes and the evolution of myriapods Nature. 376: 165-167. PMID 7603566 DOI: 10.1038/376165A0  0.304
1994 Kühnlein RP, Frommer G, Friedrich M, Gonzalez-Gaitan M, Weber A, Wagner-Bernholz JF, Gehring WJ, Jäckle H, Schuh R. spalt encodes an evolutionarily conserved zinc finger protein of novel structure which provides homeotic gene function in the head and tail region of the Drosophila embryo. The Embo Journal. 13: 168-79. PMID 7905822 DOI: 10.1002/J.1460-2075.1994.Tb06246.X  0.349
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