Year |
Citation |
Score |
2023 |
Anand GM, Megale HC, Murphy SH, Weis T, Lin Z, He Y, Wang X, Liu J, Ramanathan S. Controlling organoid symmetry breaking uncovers an excitable system underlying human axial elongation. Cell. PMID 36657443 DOI: 10.1016/j.cell.2022.12.043 |
0.752 |
|
2021 |
Valcourt JR, Huang RE, Kundu S, Venkatasubramanian D, Kingston RE, Ramanathan S. Modulating mesendoderm competence during human germ layer differentiation. Cell Reports. 37: 109990. PMID 34758327 DOI: 10.1016/j.celrep.2021.109990 |
0.736 |
|
2020 |
Melton S, Ramanathan S. Discovering a sparse set of pairwise discriminating features in high dimensional data. Bioinformatics (Oxford, England). PMID 32730566 DOI: 10.1093/Bioinformatics/Btaa690 |
0.78 |
|
2019 |
Zhang Z, Zwick S, Loew E, Grimley JS, Ramanathan S. Mouse embryo geometry drives formation of robust signaling gradients through receptor localization. Nature Communications. 10: 4516. PMID 31586065 DOI: 10.1038/S41467-019-12533-7 |
0.772 |
|
2019 |
Lee JB, Yonar A, Hallacy T, Shen CH, Milloz J, Srinivasan J, Kocabas A, Ramanathan S. A compressed sensing framework for efficient dissection of neural circuits. Nature Methods. 16: 126-133. PMID 30573831 DOI: 10.1038/S41592-018-0233-6 |
0.717 |
|
2017 |
Furchtgott LA, Melton S, Menon V, Ramanathan S. Discovering sparse transcription factor codes for cell states and state transitions during development. Elife. 6. PMID 28296636 DOI: 10.7554/Elife.20488 |
0.781 |
|
2017 |
Jang S, Choubey S, Furchtgott L, Zou LN, Doyle A, Menon V, Loew EB, Krostag AR, Martinez RA, Madisen L, Levi BP, Ramanathan S. Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states. Elife. 6. PMID 28296635 DOI: 10.7554/Elife.20487 |
0.767 |
|
2017 |
Close JL, Yao Z, Levi BP, Miller JA, Bakken TE, Menon V, Ting JT, Wall A, Krostag AR, Thomsen ER, Nelson AM, Mich JK, Hodge RD, Shehata SI, Glass IA, ... ... Ramanathan S, et al. Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. Neuron. 93: 1035-1048.e5. PMID 28279351 DOI: 10.1016/J.Neuron.2017.02.014 |
0.414 |
|
2017 |
Yao Z, Mich JK, Ku S, Menon V, Krostag AR, Martinez RA, Furchtgott L, Mulholland H, Bort S, Fuqua MA, Gregor BW, Hodge RD, Jayabalu A, May RC, Melton S, ... ... Ramanathan S, et al. A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development. Cell Stem Cell. 20: 120-134. PMID 28094016 DOI: 10.1016/J.Stem.2016.09.011 |
0.795 |
|
2016 |
Furchtgott LA, Melton S, Menon V, Ramanathan S. Author response: Discovering sparse transcription factor codes for cell states and state transitions during development Elife. DOI: 10.7554/Elife.20488.034 |
0.768 |
|
2015 |
Thomsen ER, Mich JK, Yao Z, Hodge RD, Doyle AM, Jang S, Shehata SI, Nelson AM, Shapovalova NV, Levi BP, Ramanathan S. Fixed single-cell transcriptomic characterization of human radial glial diversity. Nature Methods. PMID 26524239 DOI: 10.1038/Nmeth.3629 |
0.782 |
|
2012 |
Kocabas A, Shen CH, Guo ZV, Ramanathan S. Controlling interneuron activity in Caenorhabditis elegans to evoke chemotactic behaviour. Nature. 490: 273-7. PMID 23000898 DOI: 10.1038/Nature11431 |
0.763 |
|
2011 |
Thomson M, Liu SJ, Zou LN, Smith Z, Meissner A, Ramanathan S. Pluripotency factors in embryonic stem cells regulate differentiation into germ layers. Cell. 145: 875-89. PMID 21663792 DOI: 10.1016/J.Cell.2011.05.017 |
0.786 |
|
2011 |
McClean MN, Hersen P, Ramanathan S. Measuring in vivo signaling kinetics in a mitogen-activated kinase pathway using dynamic input stimulation. Methods in Molecular Biology (Clifton, N.J.). 734: 101-19. PMID 21468987 DOI: 10.1007/978-1-61779-086-7_6 |
0.78 |
|
2009 |
Guo ZV, Hart AC, Ramanathan S. Optical interrogation of neural circuits in Caenorhabditis elegans. Nature Methods. 6: 891-6. PMID 19898486 DOI: 10.1038/Nmeth.1397 |
0.51 |
|
2009 |
Mody A, Weiner J, Ramanathan S. Modularity of MAP kinases allows deformation of their signalling pathways. Nature Cell Biology. 11: 484-91. PMID 19295513 DOI: 10.1038/Ncb1856 |
0.762 |
|
2009 |
McClean MN, Hersen P, Ramanathan S. In vivo measurement of signaling cascade dynamics. Cell Cycle (Georgetown, Tex.). 8: 373-6. PMID 19177008 DOI: 10.4161/Cc.8.3.7450 |
0.788 |
|
2008 |
Hersen P, McClean M, Ramanathan S. [Dynamic analysis of cell signalling: the example of the Saccharomyces cerevisiae osmotic response]. MéDecine Sciences : M/S. 24: 1020-2. PMID 19116106 DOI: 10.1051/Medsci/200824121020 |
0.785 |
|
2008 |
Hersen P, McClean MN, Mahadevan L, Ramanathan S. Signal processing by the HOG MAP kinase pathway. Proceedings of the National Academy of Sciences of the United States of America. 105: 7165-70. PMID 18480263 DOI: 10.1073/Pnas.0710770105 |
0.78 |
|
2008 |
Nachman I, Ramanathan S. HIV-1 positive feedback and lytic fate. Nature Genetics. 40: 382-3. PMID 18368125 DOI: 10.1038/Ng0408-382 |
0.709 |
|
2007 |
Hallatschek O, Hersen P, Ramanathan S, Nelson DR. Genetic drift at expanding frontiers promotes gene segregation. Proceedings of the National Academy of Sciences of the United States of America. 104: 19926-30. PMID 18056799 DOI: 10.1073/Pnas.0710150104 |
0.732 |
|
2007 |
Nachman I, Regev A, Ramanathan S. Dissecting timing variability in yeast meiosis. Cell. 131: 544-56. PMID 17981121 DOI: 10.1016/J.Cell.2007.09.044 |
0.742 |
|
2007 |
Ramanathan S, Broach JR. Do cells think? Cellular and Molecular Life Sciences. 64: 1801-1804. PMID 17530173 DOI: 10.1007/S00018-007-7001-6 |
0.357 |
|
2007 |
McClean MN, Mody A, Broach JR, Ramanathan S. Cross-talk and decision making in MAP kinase pathways. Nature Genetics. 39: 409-14. PMID 17259986 DOI: 10.1038/Ng1957 |
0.778 |
|
2007 |
McClean MN, Mody A, Broach JR, Ramanathan S. Erratum: Corrigendum: Cross-talk and decision making in MAP kinase pathways Nature Genetics. 39: 567-567. DOI: 10.1038/Ng0407-567B |
0.733 |
|
2005 |
Ramanathan S, Swain PS. Tracing the sources of cellular variation. Developmental Cell. 9: 576-8. PMID 16256732 DOI: 10.1016/J.Devcel.2005.10.004 |
0.338 |
|
2005 |
Ramanathan S, Detwiler PB, Sengupta AM, Shraiman BI. G-protein-coupled enzyme cascades have intrinsic properties that improve signal localization and fidelity. Biophysical Journal. 88: 3063-71. PMID 15681646 DOI: 10.1529/Biophysj.103.039321 |
0.343 |
|
2002 |
Bouchaud E, Bouchaud JP, Fisher DS, Ramanathan S, Rice JR. Can crack front waves explain the roughness of cracks? Journal of the Mechanics and Physics of Solids. 50: 1703-1725. DOI: 10.1016/S0022-5096(01)00137-5 |
0.453 |
|
2000 |
Detwiler PB, Ramanathan S, Sengupta A, Shraiman BI. Engineering aspects of enzymatic signal transduction: photoreceptors in the retina. Biophysical Journal. 79: 2801-17. PMID 11106590 DOI: 10.1016/S0006-3495(00)76519-2 |
0.305 |
|
1998 |
Ramanathan S, Fisher DS. Onset of propagation of planar cracks in heterogeneous media Physical Review B - Condensed Matter and Materials Physics. 58: 6026-6046. DOI: 10.1103/Physrevb.58.6026 |
0.462 |
|
1997 |
Ramanathan S, Fisher DS. Dynamics and instabilities of planar tensile cracks in heterogeneous media Physical Review Letters. 79: 877-880. DOI: 10.1103/Physrevlett.79.877 |
0.449 |
|
1997 |
Ramanathan S, Ertaş D, Fisher DS. Quasistatic crack propagation in heterogeneous media Physical Review Letters. 79: 873-876. DOI: 10.1103/Physrevlett.79.873 |
0.445 |
|
1997 |
Fisher DS, Dahmen K, Ramanathan S, Ben-Zion Y. Statistics of earthquakes in simple models of heterogeneous faults Physical Review Letters. 78: 4885-4888. DOI: 10.1103/Physrevlett.78.4885 |
0.464 |
|
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