Feng Yue - Publications

Affiliations: 
2008 University of South Carolina, Columbia, SC 

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Li S, Zhang H, Wang A, Liu Y, Liu H, Yue F, Abulaiti X, Zhang C, Li L. Differentiation of adult human retinal pigment epithelial cells into dopaminergic-like cells in vitro and in the recipient monkey brain. Molecular Medicine (Cambridge, Mass.). 25: 9. PMID 30922214 DOI: 10.1186/s10020-019-0076-3  0.48
2019 Tian H, Li Y, Kang P, Wang Z, Yue F, Jiao P, Yang N, Qin S, Yao S. Endoplasmic reticulum stress-dependent autophagy inhibits glycated high-density lipoprotein-induced macrophage apoptosis by inhibiting CHOP pathway. Journal of Cellular and Molecular Medicine. PMID 30746902 DOI: 10.1111/jcmm.14203  0.44
2018 Wang M, Song Y, Zhang S, Xu S, Xiao G, Li Z, Gao F, Zhang Y, Yue F, Chan P, Cai X. Abnormal Spontaneous Neuronal Discharge and Local Field Potential both in Cortex and Striatum of a Non- human Primate of Parkinson's Disease using Implantable Microelectrode Arrays. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 1-4. PMID 30440282 DOI: 10.1109/EMBC.2018.8512999  0.56
2018 Hu X, Xu H, Shang Y, Guo L, Song L, Zhang H, Yue F, Jiang H, Zheng B. First genome sequence of a bla-carrying Citrobacter koseri isolate collected from a patient with diarrhea. Journal of Global Antimicrobial Resistance. PMID 30291901 DOI: 10.1016/j.jgar.2018.09.016  0.48
2018 Wang Y, Song F, Zhang B, Zhang L, Xu J, Kuang D, Li D, Choudhary MNK, Li Y, Hu M, Hardison R, Wang T, Yue F. The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions. Genome Biology. 19: 151. PMID 30286773 DOI: 10.1186/s13059-018-1519-9  0.56
2018 Dixon JR, Xu J, Dileep V, Zhan Y, Song F, Le VT, Yardımcı GG, Chakraborty A, Bann DV, Wang Y, Clark R, Zhang L, Yang H, Liu T, Iyyanki S, ... ... Yue F, et al. Integrative detection and analysis of structural variation in cancer genomes. Nature Genetics. PMID 30202056 DOI: 10.1038/s41588-018-0195-8  0.56
2018 Hu X, Shang Y, Guo J, Zhang H, Liang Y, Sun J, Yue F. Draft Genome Sequence of Staphylococcus microti DSM 22147, Isolated from the Common Vole. Genome Announcements. 6. PMID 29773631 DOI: 10.1128/genomeA.00420-18  0.48
2018 Xu S, Zhang Y, Zhang S, Xiao G, Wang M, Song Y, Gao F, Li Z, Zhuang P, Chan P, Tao G, Yue F, Cai X. An integrated system for synchronous detection of neuron spikes and dopamine activities in the striatum of Parkinson monkey brain. Journal of Neuroscience Methods. PMID 29698630 DOI: 10.1016/j.jneumeth.2018.04.015  0.56
2018 Zhang Y, An L, Xu J, Zhang B, Zheng WJ, Hu M, Tang J, Yue F. Enhancing Hi-C data resolution with deep convolutional neural network HiCPlus. Nature Communications. 9: 750. PMID 29467363 DOI: 10.1038/s41467-018-03113-2  1
2018 Xiong Y, Yue F, Jia Z, Gao Y, Jin W, Hu K, Zhang Y, Zhu D, Yang G, Kuang S. A novel brown adipocyte-enriched long non-coding RNA that is required for brown adipocyte differentiation and sufficient to drive thermogenic gene program in white adipocytes. Biochimica Et Biophysica Acta. PMID 29341928 DOI: 10.1016/j.bbalip.2018.01.008  0.56
2018 Sun R, Qiu L, Yi Q, Wang M, Yue F, Wang L, Song L. CgNrdp1, a conserved negative regulating factor of MyD88-dependent Toll like receptor signaling in oyster Crassostrea gigas. Fish & Shellfish Immunology. PMID 29305334 DOI: 10.1016/j.fsi.2017.12.057  0.32
2017 Zhai L, Xie J, Lin Y, Cheng K, Wang L, Yue F, Guo J, Liu J, Yao S. Genome sequencing and heterologous expression of antiporters reveal alkaline response mechanisms of Halomonas alkalicola. Extremophiles : Life Under Extreme Conditions. PMID 29270851 DOI: 10.1007/s00792-017-0991-6  0.32
2017 Liu L, Li L, Ma X, Yue F, Wang Y, Wang L, Jin P, Zhang X. Altered Circular RNA Expression in Patients with Repeated Implantation Failure. Cellular Physiology and Biochemistry : International Journal of Experimental Cellular Physiology, Biochemistry, and Pharmacology. 44: 303-313. PMID 29132137 DOI: 10.1159/000484887  0.48
2017 Xiong Y, Page JC, Narayanan N, Wang C, Jia Z, Yue F, Shi X, Jin W, Hu K, Deng M, Shi R, Shan T, Yang G, Kuang S. Peripheral Neuropathy and Hindlimb Paralysis in a Mouse Model of Adipocyte-Specific Knockout of Lkb1. Ebiomedicine. PMID 29032027 DOI: 10.1016/j.ebiom.2017.09.017  0.44
2017 Yang T, Zhang F, Yardimci GG, Song F, Hardison RC, Noble WS, Yue F, Li Q. HiCRep: assessing the reproducibility of Hi-C data using a stratum- adjusted correlation coefficient. Genome Research. PMID 28855260 DOI: 10.1101/gr.220640.117  0.4
2017 Zhu YP, Yue F, He Y, Li P, Yang Y, Han YT, Zhang YF, Sun GP, Guo DG, Yin M, Wang XN. Prokaryotic expression of the extracellular domain of porcine programmed death 1 (PD-1) and its ligand PD-L1 and identification of the binding with peripheral blood mononuclear cells in vitro. Canadian Journal of Veterinary Research = Revue Canadienne De Recherche Veterinaire. 81: 147-154. PMID 28408783  0.32
2017 Schwartz JA, Clayton KL, Mujib S, Zhang H, Rahman AK, Liu J, Yue FY, Benko E, Kovacs C, Ostrowski MA. Tim-3 is a Marker of Plasmacytoid Dendritic Cell Dysfunction during HIV Infection and Is Associated with the Recruitment of IRF7 and p85 into Lysosomes and with the Submembrane Displacement of TLR9. Journal of Immunology (Baltimore, Md. : 1950). PMID 28264968 DOI: 10.4049/jimmunol.1601298  0.48
2017 Yue F, Bi P, Wang C, Shan T, Nie Y, Ratliff TL, Gavin TP, Kuang S. Pten is necessary for the quiescence and maintenance of adult muscle stem cells. Nature Communications. 8: 14328. PMID 28094257 DOI: 10.1038/ncomms14328  0.44
2016 Wang C, Wang M, Arrington J, Shan T, Yue F, Nie Y, Tao WA, Kuang S. Ascl2 inhibits myogenesis by antagonizing the transcriptional activity of myogenic regulatory factors. Development (Cambridge, England). PMID 27993983 DOI: 10.1242/dev.138099  0.44
2016 Yao S, Tian H, Zhao L, Li J, Yang L, Yue F, Li Y, Jiao P, Yang N, Wang Y, Zhang X, Qin S. Oxidized high-density lipoprotein induces macrophage apoptosis via toll-like receptor 4-dependent CHOP pathway. Journal of Lipid Research. PMID 27895089 DOI: 10.1194/jlr.M071142  0.44
2016 Yue F, Bi P, Wang C, Li J, Liu X, Kuang S. Conditional Loss of Pten in Myogenic Progenitors Leads to Postnatal Skeletal Muscle Hypertrophy but Age-Dependent Exhaustion of Satellite Cells. Cell Reports. 17: 2340-2353. PMID 27880908 DOI: 10.1016/j.celrep.2016.11.002  0.44
2016 Jia Z, Wang M, Yue F, Wang X, Wang L, Song L. The immunomodulation of a maternal translationally controlled tumor protein (TCTP) in Zhikong scallop Chlamys farreri. Fish & Shellfish Immunology. PMID 27871901 DOI: 10.1016/j.fsi.2016.11.043  0.32
2016 Bi P, Yue F, Sato Y, Wirbisky S, Liu W, Shan T, Wen Y, Zhou D, Freeman J, Kuang S. Stage-specific effects of Notch activation during skeletal myogenesis. Elife. 5. PMID 27644105 DOI: 10.7554/eLife.17355  0.44
2016 Bi P, Yue F, Karki A, Castro B, Wirbisky SE, Wang C, Durkes A, Elzey BD, Andrisani OM, Bidwell CA, Freeman JL, Konieczny SF, Kuang S. Notch activation drives adipocyte dedifferentiation and tumorigenic transformation in mice. The Journal of Experimental Medicine. PMID 27573812 DOI: 10.1084/jem.20160157  0.44
2016 Shan T, Xiong Y, Zhang P, Li Z, Jiang Q, Bi P, Yue F, Yang G, Wang Y, Liu X, Kuang S. Lkb1 controls brown adipose tissue growth and thermogenesis by regulating the intracellular localization of CRTC3. Nature Communications. 7: 12205. PMID 27461402 DOI: 10.1038/ncomms12205  0.44
2016 Jiang Q, Liu Z, Zhou Z, Wang L, Wang L, Yue F, Wang J, Wang H, Song L. Transcriptional activation and translocation of ancient NOS during immune response. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 27402673 DOI: 10.1096/fj.201500193RR  0.32
2016 Zhang S, Song Y, Wang M, Zhang Z, Fan X, Song X, Zhuang P, Yue F, Chan P, Cai X. A silicon based implantable microelectrode array for electrophysiological and dopamine recording from cortex to striatum in the non-human primate brain. Biosensors & Bioelectronics. 85: 53-61. PMID 27155116 DOI: 10.1016/j.bios.2016.04.087  0.32
2016 Zhang Y, An L, Yue F, Hardison RC. Jointly characterizing epigenetic dynamics across multiple human cell types. Nucleic Acids Research. PMID 27095202 DOI: 10.1093/nar/gkw278  0.4
2016 Yue F, Wang L, Wang H, Song L. Expression of hematopoietic transcription factors Runt, CBFβ and GATA during ontogenesis of scallop Chlamys farreri. Developmental and Comparative Immunology. PMID 27012994 DOI: 10.1016/j.dci.2016.03.021  0.32
2016 Xu Z, Zhang G, Duan Q, Chai S, Zhang B, Wu C, Jin F, Yue F, Li Y, Hu M. HiView: an integrative genome browser to leverage Hi-C results for the interpretation of GWAS variants. Bmc Research Notes. 9: 159. PMID 26969411 DOI: 10.1186/s13104-016-1947-0  0.56
2016 Wang M, Wang L, Xin L, Wang X, Wang L, Xu J, Jia Z, Yue F, Wang H, Song L. Two novel LRR-only proteins in Chlamys farreri: similar in structure, yet different in expression profile and pattern recognition. Developmental and Comparative Immunology. PMID 26826425 DOI: 10.1016/j.dci.2016.01.013  0.56
2015 Chen M, Yang W, Li X, Li X, Wang P, Yue F, Yang H, Chan P, Yu S. Age- and brain region-dependent α-synuclein oligomerization is attributed to alterations in intrinsic enzymes regulating α-synuclein phosphorylation in aging monkey brains. Oncotarget. 8466-8480. PMID 27032368 DOI: 10.18632/oncotarget.6445  0.32
2015 Yang L, Lv X, Wei D, Yue F, Guo J, Zhang T. Metabolic syndrome and the risk of bone fractures: A Meta-analysis of prospective cohort studies. Bone. PMID 26708924 DOI: 10.1016/j.bone.2015.12.008  0.32
2015 Jiang C, Kuang L, Merkel MP, Yue F, Cano-Vega MA, Narayanan N, Kuang S, Deng M. Biodegradable Polymeric Microsphere-Based Drug Delivery for Inductive Browning of Fat. Frontiers in Endocrinology. 6: 169. PMID 26617571 DOI: 10.3389/fendo.2015.00169  0.44
2015 Jiang C, Wang JH, Yue F, Kuang S. The brain expressed x-linked gene 1 (Bex1) regulates myoblast fusion. Developmental Biology. PMID 26586200 DOI: 10.1016/j.ydbio.2015.11.007  0.44
2015 Ren B, Yue F. Transcriptional Enhancers: Bridging the Genome and Phenome. Cold Spring Harbor Symposia On Quantitative Biology. PMID 26582789 DOI: 10.1101/sqb.2015.80.027219  1
2015 Liu G, Chen M, Mi N, Yang W, Li X, Wang P, Yin N, Li Y, Yue F, Chan P, Yu S. Increased oligomerization and phosphorylation of α-synuclein are associated with decreased activity of glucocerebrosidase and protein phosphatase 2A in aging monkey brains. Neurobiology of Aging. PMID 26149921 DOI: 10.1016/j.neurobiolaging.2015.06.004  0.44
2015 Wang A, Yue F, Li Y, Xie R, Harper T, Patel NA, Muth K, Palmer J, Qiu Y, Wang J, Lam DK, Raum JC, Stoffers DA, Ren B, Sander M. Epigenetic priming of enhancers predicts developmental competence of hESC-derived endodermal lineage intermediates. Cell Stem Cell. 16: 386-99. PMID 25842977 DOI: 10.1016/j.stem.2015.02.013  1
2015 Leung D, Jung I, Rajagopal N, Schmitt A, Selvaraj S, Lee AY, Yen CA, Lin S, Lin Y, Qiu Y, Xie W, Yue F, Hariharan M, Ray P, Kuan S, et al. Integrative analysis of haplotype-resolved epigenomes across human tissues. Nature. 518: 350-4. PMID 25693566 DOI: 10.1038/nature14217  1
2014 Pope BD, Ryba T, Dileep V, Yue F, Wu W, Denas O, Vera DL, Wang Y, Hansen RS, Canfield TK, Thurman RE, Cheng Y, Gülsoy G, Dennis JH, Snyder MP, et al. Topologically associating domains are stable units of replication-timing regulation. Nature. 515: 402-5. PMID 25409831 DOI: 10.1038/nature13986  1
2014 Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature. 515: 355-64. PMID 25409824 DOI: 10.1038/nature13992  1
2013 Hon GC, Rajagopal N, Shen Y, McCleary DF, Yue F, Dang MD, Ren B. Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues. Nature Genetics. 45: 1198-206. PMID 23995138 DOI: 10.1038/ng.2746  1
2012 Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... ... Yue F, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/gb-2012-13-8-418  1
2012 Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, Kuan S, Wagner U, Dixon J, Lee L, Lobanenkov VV, Ren B. A map of the cis-regulatory sequences in the mouse genome. Nature. 488: 116-20. PMID 22763441 DOI: 10.1038/nature11243  1
2012 Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature. 485: 376-80. PMID 22495300 DOI: 10.1038/nature11082  1
2012 Xie W, Barr CL, Kim A, Yue F, Lee AY, Eubanks J, Dempster EL, Ren B. Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome. Cell. 148: 816-31. PMID 22341451 DOI: 10.1016/j.cell.2011.12.035  1
2009 Yue F, Tang J. A space-efficient algorithm for three sequence alignment and ancestor inference. International Journal of Data Mining and Bioinformatics. 3: 192-204. PMID 19517989 DOI: 10.1504/IJDMB.2009.024851  1
2009 Yue F, Shi J, Tang J. Simultaneous phylogeny reconstruction and multiple sequence alignment. Bmc Bioinformatics. 10: S11. PMID 19208110 DOI: 10.1186/1471-2105-10-S1-S11  1
2008 Yue F, Zhang M, Tang J. Phylogenetic reconstruction from transpositions. Bmc Genomics. 9: S15. PMID 18831780 DOI: 10.1186/1471-2164-9-S2-S15  1
2008 Yue F, Cui L, dePamphilis CW, Moret BM, Tang J. Gene rearrangement analysis and ancestral order inference from chloroplast genomes with inverted repeat. Bmc Genomics. 9: S25. PMID 18366615 DOI: 10.1186/1471-2164-9-S1-S25  1
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