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Zhe Jim Zhang, Ph.D. - Publications

Affiliations: 
2008- Biomedical and Health Informatics Children’s Hospital of Philadelphia / University of Pennsylvania, Philadelphia, PA, United States 
Area:
Bioinformatics, Computational Biology
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Qian GF, Yuan LS, Chen M, Ye D, Chen GP, Zhang Z, Li CJ, Vijayan V, Xiao Y. PPWD1 is associated with the occurrence of postmenopausal osteoporosis as determined by weighted gene co‑expression network analysis. Molecular Medicine Reports. PMID 31432133 DOI: 10.3892/Mmr.2019.10570  0.301
2019 Xie HM, Taylor DM, Zhang Z, McDonald-McGinn DM, Zackai EH, Stambolian D, Hakonarson H, Morrow BE, Emanuel BS, Goldmuntz E. Copy number variations in individuals with conotruncal heart defects reveal some shared developmental pathways irrespective of 22q11.2 deletion status. Birth Defects Research. PMID 31222980 DOI: 10.1002/Bdr2.1534  0.508
2019 Goel N, Hopkins C, Ruggieri M, Zhang Z, Taylor DM, Allison KC. 0036 The Impact of Nighttime Eating: A Randomized Controlled Trial of Daytime vs. Delayed Eating on Weight and Metabolism in Adults of Normal Weight Sleep. 42. DOI: 10.1093/Sleep/Zsz067.035  0.48
2018 Zhang Z, Shi L, Song L, Maurer K, Petri MA, Sullivan KE. Overall Downregulation of mRNAs and Enrichment of H3K4me3 Change Near Genome-Wide Association Study Signals in Systemic Lupus Erythematosus: Cell-Specific Effects. Frontiers in Immunology. 9: 497. PMID 29593737 DOI: 10.3389/Fimmu.2018.00497  0.339
2018 Mills JA, Herrera PS, Kaur M, Leo L, McEldrew D, Tintos-Hernandez JA, Rajagopalan R, Gagne A, Zhang Z, Ortiz-Gonzalez XR, Krantz ID. NIPBL+/- haploinsufficiency reveals a constellation of transcriptome disruptions in the pluripotent and cardiac states. Scientific Reports. 8: 1056. PMID 29348408 DOI: 10.1038/S41598-018-19173-9  0.307
2016 Kaur M, Mehta D, Noon SE, Deardorff MA, Zhang Z, Krantz ID. NIPBL expression levels in CdLS probands as a predictor of mutation type and phenotypic severity. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics. PMID 27125329 DOI: 10.1002/Ajmg.C.31495  0.304
2016 Zhang Z, Shi L, Dawany N, Kelsen J, Petri MA, Sullivan KE. H3K4 tri-methylation breadth at transcription start sites impacts the transcriptome of systemic lupus erythematosus. Clinical Epigenetics. 8: 14. PMID 26839600 DOI: 10.1186/S13148-016-0179-4  0.315
2015 Leung YT, Shi L, Maurer K, Song L, Zhang Z, Petri M, Sullivan KE. Interferon regulatory factor 1 and histone H4 acetylation in systemic lupus erythematosus. Epigenetics : Official Journal of the Dna Methylation Society. 10: 191-9. PMID 25611806 DOI: 10.1080/15592294.2015.1009764  0.303
2015 Zhang Z, Shi L, Song L, Ephrem E, Petri M, Sullivan KE. Interferon regulatory factor 1 marks activated genes and can induce target gene expression in systemic lupus erythematosus. Arthritis & Rheumatology (Hoboken, N.J.). 67: 785-96. PMID 25418955 DOI: 10.1002/Art.38964  0.318
2014 Kaur M, Izumi K, Wilkens AB, Chatfield KC, Spinner NB, Conlin LK, Zhang Z, Krantz ID. Genome-wide expression analysis in fibroblast cell lines from probands with Pallister Killian syndrome. Plos One. 9: e108853. PMID 25329894 DOI: 10.1371/Journal.Pone.0108853  0.31
2013 Zhang Z, Tsukikawa M, Peng M, Polyak E, Nakamaru-Ogiso E, Ostrovsky J, McCormack S, Place E, Clarke C, Reiner G, McCormick E, Rappaport E, Haas R, Baur JA, Falk MJ. Primary respiratory chain disease causes tissue-specific dysregulation of the global transcriptome and nutrient-sensing signaling network. Plos One. 8: e69282. PMID 23894440 DOI: 10.1371/Journal.Pone.0069282  0.313
2010 Sullivan KE, Zhang Z, Maurer K, Perin JC, Song L. Cytokine-induced monocyte characteristics in SLE Journal of Biomedicine and Biotechnology. 2010. PMID 20625490 DOI: 10.1155/2010/507475  0.315
2010 Balamuth NJ, Wood A, Wang Q, Jagannathan J, Mayes P, Zhang Z, Chen Z, Rappaport E, Courtright J, Pawel B, Weber B, Wooster R, Sekyere EO, Marshall GM, Maris JM. Serial transcriptome analysis and cross-species integration identifies centromere-associated protein E as a novel neuroblastoma target. Cancer Research. 70: 2749-58. PMID 20233875 DOI: 10.1158/0008-5472.Can-09-3844  0.303
2010 Gregory GD, Miccio A, Bersenev A, Wang Y, Hong W, Zhang Z, Poncz M, Tong W, Blobel GA. FOG1 requires NuRD to promote hematopoiesis and maintain lineage fidelity within the megakaryocytic-erythroid compartment. Blood. 115: 2156-66. PMID 20065294 DOI: 10.1182/Blood-2009-10-251280  0.327
2009 Liu J, Zhang Z, Bando M, Itoh T, Deardorff MA, Clark D, Kaur M, Tandy S, Kondoh T, Rappaport E, Spinner NB, Vega H, Jackson LG, Shirahige K, Krantz ID. Transcriptional dysregulation in NIPBL and cohesin mutant human cells. Plos Biology. 7: e1000119. PMID 19468298 DOI: 10.1371/Journal.Pbio.1000119  0.334
2007 Zhang Z, Reenstra W, Weiner DJ, Louboutin JP, Wilson JM. The p38 mitogen-activated protein kinase signaling pathway is coupled to Toll-like receptor 5 to mediate gene regulation in response to Pseudomonas aeruginosa infection in human airway epithelial cells. Infection and Immunity. 75: 5985-92. PMID 17908812 DOI: 10.1128/Iai.00678-07  0.302
2003 Wang X, Zhang Z, Louboutin JP, Moser C, Weiner DJ, Wilson JM. Airway epithelia regulate expression of human beta-defensin 2 through Toll-like receptor 2. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 17: 1727-9. PMID 12958190 DOI: 10.1096/Fj.02-0616Fje  0.303
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