Wing-Hung Wong - Publications

University of Wisconsin, Madison, Madison, WI 

23/216 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Xin J, Zhang H, He Y, Duren Z, Bai C, Chen L, Luo X, Yan DS, Zhang C, Zhu X, Yuan Q, Feng Z, Cui C, Qi X, Ouzhuluobu, ... Wong WH, et al. Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation. Nature Communications. 11: 4928. PMID 33004791 DOI: 10.1038/s41467-020-18638-8  0.6
2020 Li W, Duren Z, Jiang R, Wong WH. A method for scoring the cell type-specific impacts of noncoding variants in personal genomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32817564 DOI: 10.1073/pnas.1922703117  0.6
2020 Duren Z, Chen X, Xin J, Wang Y, Wong W. Time course regulatory analysis based on paired expression and chromatin accessibility data. Genome Research. PMID 32188700 DOI: 10.1101/gr.257063.119  0.6
2020 Zhang X, Hong D, Ma S, Ward T, Ho M, Pattni R, Duren Z, Stankov A, Bade Shrestha S, Hallmayer J, Wong WH, Reiss AL, Urban AE. Integrated functional genomic analyses of Klinefelter and Turner syndromes reveal global network effects of altered X chromosome dosage. Proceedings of the National Academy of Sciences of the United States of America. PMID 32071206 DOI: 10.1073/pnas.1910003117  0.6
2019 Guan L, Chen X, Wong WH. Detecting strong signals in gene perturbation experiments: An adaptive approach with power guarantee and FDR control. Journal of the American Statistical Association. 2019. PMID 33311819 DOI: 10.1080/01621459.2019.1635484  0.6
2019 Zeng W, Chen X, Duren Z, Wang Y, Jiang R, Wong WH. DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data. Nature Communications. 10: 4613. PMID 31601804 DOI: 10.1038/s41467-019-12547-1  0.6
2019 Li W, Wong WH, Jiang R. DeepTACT: predicting 3D chromatin contacts via bootstrapping deep learning. Nucleic Acids Research. PMID 30869141 DOI: 10.1093/nar/gkz167  0.6
2019 Li L, Wang Y, Torkelson JL, Shankar G, Pattison JM, Zhen HH, Fang F, Duren Z, Xin J, Gaddam S, Melo SP, Piekos SN, Li J, Liaw EJ, Chen L, ... ... Wong WH, et al. TFAP2C- and p63-Dependent Networks Sequentially Rearrange Chromatin Landscapes to Drive Human Epidermal Lineage Commitment. Cell Stem Cell. PMID 30686763 DOI: 10.1016/j.stem.2018.12.012  0.6
2019 Li Q, Zhao K, Bustamante CD, Ma X, Wong WH. Xrare: a machine learning method jointly modeling phenotypes and genetic evidence for rare disease diagnosis. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 30675030 DOI: 10.1038/s41436-019-0439-8  0.64
2018 Liu Y, Yu C, Daley TP, Wang F, Cao WS, Bhate S, Lin X, Still C, Liu H, Zhao D, Wang H, Xie XS, Ding S, Wong WH, Wernig M, et al. CRISPR Activation Screens Systematically Identify Factors that Drive Neuronal Fate and Reprogramming. Cell Stem Cell. PMID 30318302 DOI: 10.1016/j.stem.2018.09.003  0.4
2018 Daley TP, Lin Z, Lin X, Liu Y, Wong WH, Qi LS. CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens. Genome Biology. 19: 159. PMID 30296940 DOI: 10.1186/s13059-018-1538-6  0.4
2018 Duren Z, Chen X, Zamanighomi M, Zeng W, Satpathy AT, Chang HY, Wang Y, Wong WH. Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations. Proceedings of the National Academy of Sciences of the United States of America. PMID 29987051 DOI: 10.1073/pnas.1805681115  0.6
2018 Zamanighomi M, Lin Z, Daley T, Chen X, Duren Z, Schep A, Greenleaf WJ, Wong WH. Unsupervised clustering and epigenetic classification of single cells. Nature Communications. 9: 2410. PMID 29925875 DOI: 10.1038/s41467-018-04629-3  0.6
2018 Li W, Li Q, Kang S, Same M, Zhou Y, Sun C, Liu CC, Matsuoka L, Sher L, Wong WH, Alber F, Zhou XJ. CancerDetector: ultrasensitive and non-invasive cancer detection at the resolution of individual reads using cell-free DNA methylation sequencing data. Nucleic Acids Research. PMID 29897492 DOI: 10.1093/nar/gky423  0.4
2017 Wu M, Lin Z, Ma S, Chen T, Jiang R, Wong WH. Simultaneous inference of phenotype-associated genes and relevant tissues from GWAS data via Bayesian integration of multiple tissue-specific gene networks. Journal of Molecular Cell Biology. PMID 29300920 DOI: 10.1093/jmcb/mjx059  0.6
2017 Duren Z, Chen X, Jiang R, Wang Y, Wong WH. Modeling gene regulation from paired expression and chromatin accessibility data. Proceedings of the National Academy of Sciences of the United States of America. PMID 28576882 DOI: 10.1073/pnas.1704553114  0.6
2017 Zamanighomi M, Lin Z, Wang Y, Jiang R, Wong WH. Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data. Nucleic Acids Research. PMID 28472398 DOI: 10.1093/nar/gkx358  0.6
2017 Chen X, Yang H, Wong WH. Phased Genome Sequencing Through Chromosome Sorting. Methods in Molecular Biology (Clifton, N.J.). 1551: 171-188. PMID 28138847 DOI: 10.1007/978-1-4939-6750-6_10  0.6
2016 Wang Y, Jiang R, Wong WH. Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data. National Science Review. 3: 240-251. PMID 28690910 DOI: 10.1093/nsr/nww025  0.6
2016 Lin Z, Yang C, Zhu Y, Duchi J, Fu Y, Wang Y, Jiang B, Zamanighomi M, Xu X, Li M, Sestan N, Zhao H, Wong WH. Simultaneous dimension reduction and adjustment for confounding variation. Proceedings of the National Academy of Sciences of the United States of America. PMID 27930330 DOI: 10.1073/pnas.1617317113  0.6
2015 Mu JC, Tootoonchi Afshar P, Mohiyuddin M, Chen X, Li J, Bani Asadi N, Gerstein MB, Wong WH, Lam HY. Leveraging long read sequencing from a single individual to provide a comprehensive resource for benchmarking variant calling methods. Scientific Reports. 5: 14493. PMID 26412485 DOI: 10.1038/srep14493  0.6
2014 Ma X, Xiao L, Wong WH. Learning regulatory programs by threshold SVD regression. Proceedings of the National Academy of Sciences of the United States of America. 111: 15675-80. PMID 25331876 DOI: 10.1073/pnas.1417808111  0.64
2011 Yang H, Chen X, Wong WH. Completely phased genome sequencing through chromosome sorting. Proceedings of the National Academy of Sciences of the United States of America. 108: 12-7. PMID 21169219 DOI: 10.1073/pnas.1016725108  0.6
Low-probability matches
2017 Carter AC, Chang HY, Church G, Dombkowski A, Ecker JR, Gil E, Giresi PG, Greely H, Greenleaf WJ, Hacohen N, He C, Hill D, Ko J, Kohane I, Kundaje A, ... ... Wong W, et al. Challenges and recommendations for epigenomics in precision health. Nature Biotechnology. 35: 1128-1132. PMID 29220033 DOI: 10.1038/nbt.4030  0.2
2015 Weirather JL, Afshar PT, Clark TA, Tseng E, Powers LS, Underwood JG, Zabner J, Korlach J, Wong WH, Au KF. Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing. Nucleic Acids Research. PMID 26040699 DOI: 10.1093/nar/gkv562  0.2
2015 Tsai CH, Chih YT, Wong WH, Lee CY. A Hardware-Efficient Sigmoid Function with Adjustable Precision for a Neural Network System Ieee Transactions On Circuits and Systems Ii: Express Briefs. 62: 1073-1077. DOI: 10.1109/TCSII.2015.2456531  0.2
2014 Lo WS, Gardiner E, Xu Z, Lau CF, Wang F, Zhou JJ, Mendlein JD, Nangle LA, Chiang KP, Yang XL, Au KF, Wong WH, Guo M, Zhang M, Schimmel P. Human tRNA synthetase catalytic nulls with diverse functions. Science (New York, N.Y.). 345: 328-32. PMID 25035493 DOI: 10.1126/science.1252943  0.2
2014 Seok J, Tian L, Wong WH. Density estimation on multivariate censored data with optional Pólya tree Biostatistics. 15: 182-195. PMID 23902636 DOI: 10.1093/biostatistics/kxt025  0.2
2013 Au KF, Sebastiano V, Afshar PT, Durruthy JD, Lee L, Williams BA, van Bakel H, Schadt EE, Reijo-Pera RA, Underwood JG, Wong WH. Characterization of the human ESC transcriptome by hybrid sequencing. Proceedings of the National Academy of Sciences of the United States of America. 110: E4821-30. PMID 24282307 DOI: 10.1073/pnas.1320101110  0.2
2013 Schadt EE, Banerjee O, Fang G, Feng Z, Wong WH, Zhang X, Kislyuk A, Clark TA, Luong K, Keren-Paz A, Chess A, Kumar V, Chen-Plotkin A, Sondheimer N, Korlach J, et al. Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases. Genome Research. 23: 129-41. PMID 23093720 DOI: 10.1101/gr.136739.111  0.2
2013 Tan MH, Au KF, Yablonovitch AL, Wills AE, Chuang J, Baker JC, Wong WH, Li JB. RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development. Genome Research. 23: 201-16. PMID 22960373 DOI: 10.1101/gr.141424.112  0.2
2013 Johnson NA, London SJ, Romieu I, Wong WH, Tang H. Accurate construction of long range haplotype in unrelated individuals Statistica Sinica. 23: 1441-1461. DOI: 10.5705/ss.2012.141s  0.2
2013 Meister A, Li YH, Choi B, Wong WH. Learning a nonlinear dynamical system model of gene regulation: A perturbed steady-state approach Annals of Applied Statistics. 7: 1311-1333. DOI: 10.1214/13-AOAS645  0.2
2013 Hiller D, Wong WH. Simultaneous Isoform Discovery and Quantification from RNA-Seq Statistics in Biosciences. 5: 100-118. DOI: 10.1007/s12561-012-9069-2  0.2
2012 Au KF, Underwood JG, Lee L, Wong WH. Improving PacBio long read accuracy by short read alignment. Plos One. 7: e46679. PMID 23056399 DOI: 10.1371/journal.pone.0046679  0.2
2012 Park JS, Ma W, O'Brien LL, Chung E, Guo JJ, Cheng JG, Valerius MT, McMahon JA, Wong WH, McMahon AP. Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks. Developmental Cell. 23: 637-51. PMID 22902740 DOI: 10.1016/j.devcel.2012.07.008  0.2
2012 Ma L, Wong WH, Owen AB. A sparse transmission disequilibrium test for haplotypes based on Bradley-Terry graphs. Human Heredity. 73: 52-61. PMID 22398955 DOI: 10.1159/000335937  0.2
2011 Ma W, Wong WH. The analysis of ChIP-seq data Methods in Enzymology. 497: 51-73. PMID 21601082 DOI: 10.1016/B978-0-12-385075-100003-2  0.2
2011 Pan Y, Ouyang Z, Wong WH, Baker JC. A new FACS approach isolates hESC derived endoderm using transcription factors. Plos One. 6: e17536. PMID 21408072 DOI: 10.1371/journal.pone.0017536  0.2
2011 Xu W, Seok J, Mindrinos MN, Schweitzer AC, Jiang H, Wilhelmy J, Clark TA, Kapur K, Xing Y, Faham M, Storey JD, Moldawer LL, Maier RV, Tompkins RG, Wong WH, et al. Human transcriptome array for high-throughput clinical studies. Proceedings of the National Academy of Sciences of the United States of America. 108: 3707-12. PMID 21317363 DOI: 10.1073/pnas.1019753108  0.2
2011 Ma L, Wong WH. Coupling optional pólya trees and the two sample problem Journal of the American Statistical Association. 106: 1553-1565. DOI: 10.1198/jasa.2011.tm10003  0.2
2011 Ji H, Jiang H, Ma W, Wong WH. Using CisGenome to analyze ChIP-chip and ChIP-seq data Current Protocols in Bioinformatics. 1-45. DOI: 10.1002/0471250953.bi0213s33  0.2
2010 Banerjee P, Choi B, Shahine LK, Jun SH, O'Leary K, Lathi RB, Westphal LM, Wong WH, Yao MW. Deep phenotyping to predict live birth outcomes in in vitro fertilization. Proceedings of the National Academy of Sciences of the United States of America. 107: 13570-5. PMID 20643955 DOI: 10.1073/pnas.1002296107  0.2
2010 Zhou B, Xu W, Herndon D, Tompkins R, Davis R, Xiao W, Wong WH, Toner M, Warren HS, Schoenfeld DA, Rahme L, McDonald-Smith GP, Hayden D, Mason P, et al. Analysis of factorial time-course microarrays with application to a clinical study of burn injury. Proceedings of the National Academy of Sciences of the United States of America. 107: 9923-8. PMID 20479259 DOI: 10.1073/pnas.1002757107  0.2
2010 Tanner MA, Wong WH. From EM to data augmentation: The emergence of MCMC Bayesian computation in the 1980s Statistical Science. 25: 506-516. DOI: 10.1214/10-STS341  0.2
2010 Wong WH, Ma L. Optional Pólya tree and Bayesian inference Annals of Statistics. 38: 1433-1459. DOI: 10.1214/09-AOS755  0.2
2009 Ouyang Z, Zhou Q, Wong WH. ChIP-Seq of transcription factors predicts absolute and differential gene expression in embryonic stem cells Proceedings of the National Academy of Sciences of the United States of America. 106: 21521-21526. PMID 19995984 DOI: 10.1073/pnas.0904863106  0.2
2009 Mok SC, Bonome T, Vathipadiekal V, Bell A, Johnson ME, Wong KK, Park DC, Hao K, Yip DK, Donninger H, Ozbun L, Samimi G, Brady J, Randonovich M, Pise-Masison CA, ... ... Wong WH, et al. A gene signature predictive for outcome in advanced ovarian cancer identifies a survival factor: microfibril-associated glycoprotein 2. Cancer Cell. 16: 521-32. PMID 19962670 DOI: 10.1016/j.ccr.2009.10.018  0.2
2009 Jiang H, Wong WH. Statistical inferences for isoform expression in RNA-Seq Bioinformatics. 25: 1026-1032. PMID 19244387 DOI: 10.1093/bioinformatics/btp113  0.2
2009 Zhou Q, Wong WH. Energy landscape of a spin-glass model: Exploration and characterization Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 79. DOI: 10.1103/PhysRevE.79.051117  0.2
2008 Jiang H, Wong WH. SeqMap: Mapping massive amount of oligonucleotides to the genome Bioinformatics. 24: 2395-2396. PMID 18697769 DOI: 10.1093/bioinformatics/btn429  0.2
2008 Jun SH, Choi B, Shahine L, Westphal LM, Behr B, Reijo Pera RA, Wong WH, Yao MWM. Defining human embryo phenotypes by cohort-specific prognostic factors Plos One. 3. PMID 18596962 DOI: 10.1371/journal.pone.0002562  0.2
2008 Zhou Q, Wong WH. Reconstructing the energy landscape of a distribution from Monte Carlo samples Annals of Applied Statistics. 2: 1307-1331. DOI: 10.1214/08-AOAS196  0.2
2008 Ellis B, Wong WH. Learning causal Bayesian network structures from experimental data Journal of the American Statistical Association. 103: 778-789. DOI: 10.1198/016214508000000193  0.2
2007 Xing Y, Ouyang Z, Kapur K, Scott MP, Wong WH. Assessing the conservation of mammalian gene expression using high-density exon arrays. Molecular Biology and Evolution. 24: 1283-5. PMID 17387099 DOI: 10.1093/molbev/msm061  0.2
2006 Xing Y, Kapur K, Wong WH. Probe selection and expression index computation of affymetrix exon arrays Plos One. 1. PMID 17183719 DOI: 10.1371/journal.pone.0000088  0.2
2006 Lipan O, Wong WH. Is the future biology Shakespearean or Newtonian? Molecular Biosystems. 2: 411-416. PMID 17153137 DOI: 10.1039/b607243g  0.2
2006 Ji H, Vokes SA, Wong WH. A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors. Nucleic Acids Research. 34: e146. PMID 17090591 DOI: 10.1093/nar/gkl803  0.2
2006 Ji H, Wong WH. Computational biology: Toward deciphering gene regulatory information in mammalian genomes Biometrics. 62. PMID 16984301 DOI: 10.1111/j.1541-0420.2006.00625.x  0.2
2006 Zhang X, Lu X, Shi Q, Xu XQ, Leung HC, Harris LN, Iglehart JD, Miron A, Liu JS, Wong WH. Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data. Bmc Bioinformatics. 7: 197. PMID 16606446 DOI: 10.1186/1471-2105-7-197  0.2
2006 Kim RS, Ji H, Wong WH. An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse. Bmc Bioinformatics. 7: 44. PMID 16438730 DOI: 10.1186/1471-2105-7-44  0.2
2006 Wong WH. Estimation of the loss of an estimate Frontiers in Statistics: Dedicated to Peter John Bickel in Honor of His 65th Birthday. 491-506. DOI: 10.1142/9781860948886_0022  0.2
2005 Bonome T, Lee JY, Park DC, Radonovich M, Pise-Masison C, Brady J, Gardner GJ, Hao K, Wong WH, Barrett JC, Lu KH, Sood AK, Gershenson DM, Mok SC, Birrer MJ. Expression profiling of serous low malignant potential, low-grade, and high-grade tumors of the ovary. Cancer Research. 65: 10602-12. PMID 16288054 DOI: 10.1158/0008-5472.CAN-05-2240  0.2
2005 Li X, Zhong S, Wong WH. Reliable prediction of transcription factor binding sites by phylogenetic verification. Proceedings of the National Academy of Sciences of the United States of America. 102: 16945-50. PMID 16286651 DOI: 10.1073/pnas.0504201102  0.2
2005 Ji H, Wong WH. TileMap: Create chromosomal map of tiling array hybridizations Bioinformatics. 21: 3629-3636. PMID 16046496 DOI: 10.1093/bioinformatics/bti593  0.2
2005 Li X, Wong WH. Sampling motifs on phylogenetic trees. Proceedings of the National Academy of Sciences of the United States of America. 102: 9481-6. PMID 15983378 DOI: 10.1073/pnas.0501620102  0.2
2005 Dorer RK, Zhong S, Tallarico JA, Wong WH, Mitchison TJ, Murray AW. A small-molecule inhibitor of Mps1 blocks the spindle-checkpoint response to a lack of tension on mitotic chromosomes. Current Biology : Cb. 15: 1070-6. PMID 15936280 DOI: 10.1016/j.cub.2005.05.020  0.2
2005 Lipan O, Wong WH. The use of oscillatory signals in the study of genetic networks Proceedings of the National Academy of Sciences of the United States of America. 102: 7063-7068. PMID 15883385 DOI: 10.1073/pnas.0403790102  0.2
2005 Tang D, Khaleque MA, Jones EL, Theriault JR, Li C, Wong WH, Stevenson MA, Calderwood SK. Expression of heat shock proteins and heat shock protein messenger ribonucleic acid in human prostate carcinoma in vitro and in tumors in vivo. Cell Stress & Chaperones. 10: 46-58. PMID 15832947 DOI: 10.1379/CSC-44R.1  0.2
2005 Tseng GC, Wong WH. Tight clustering: A resampling-based approach for identifying stable and tight patterns in data Biometrics. 61: 10-16. PMID 15737073 DOI: 10.1111/j.0006-341X.2005.031032.x  0.2
2005 Leykin I, Hao K, Cheng J, Meyer N, Pollak MR, Smith RJ, Wong WH, Rosenow C, Li C. Comparative linkage analysis and visualization of high-density oligonucleotide SNP array data. Bmc Genetics. 6: 7. PMID 15713228 DOI: 10.1186/1471-2156-6-7  0.2
2005 Hong P, Wong WH. GeneNotes--a novel information management software for biologists. Bmc Bioinformatics. 6: 20. PMID 15686593 DOI: 10.1186/1471-2105-6-20  0.2
2004 Zhong S, Tian L, Li C, Storch KF, Wong WH. Comparative analysis of gene sets in the Gene Ontology space under the multiple hypothesis testing framework. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 425-35. PMID 16448035 DOI: 10.1109/csb.2004.1332455  0.2
2004 Zhong S, Storch KF, Lipan O, Kao MC, Weitz CJ, Wong WH. GoSurfer: a graphical interactive tool for comparative analysis of large gene sets in Gene Ontology space. Applied Bioinformatics. 3: 261-4. PMID 15702958 DOI: 10.2165/00822942-200403040-00009  0.2
2004 Zhou Q, Wong WH. CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling Proceedings of the National Academy of Sciences of the United States of America. 101: 12114-12119. PMID 15297614 DOI: 10.1073/pnas.0402858101  0.2
2004 Cai L, Huang H, Blackshaw S, Liu JS, Cepko C, Wong WH. Clustering analysis of SAGE data using a Poisson approach. Genome Biology. 5: R51. PMID 15239836 DOI: 10.1186/gb-2004-5-7-r51  0.2
2004 Lin M, Wei LJ, Sellers WR, Lieberfarb M, Wong WH, Li C. dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data. Bioinformatics (Oxford, England). 20: 1233-40. PMID 14871870 DOI: 10.1093/bioinformatics/bth069  0.2
2003 O'Hagan RC, Brennan CW, Strahs A, Zhang X, Kannan K, Donovan M, Cauwels C, Sharpless NE, Wong WH, Chin L. Array comparative genome hybridization for tumor classification and gene discovery in mouse models of malignant melanoma. Cancer Research. 63: 5352-6. PMID 14500367  0.2
2003 Tseng GC, Wong WH. A method for tight clustering: With application to microarray Proceedings of the 2003 Ieee Bioinformatics Conference, Csb 2003. 396-397. DOI: 10.1109/CSB.2003.1227343  0.2
2002 Storch KF, Lipan O, Leykin I, Viswanathan N, Davis FC, Wong WH, Weitz CJ. Extensive and divergent circadian gene expression in liver and heart. Nature. 417: 78-83. PMID 11967526 DOI: 10.1038/nature744  0.2
2002 Block-Alper L, Webster P, Zhou X, Supeková L, Wong WH, Schultz PG, Meyer DI. IN02, a positive regulator of lipid biosynthesis, is essential for the formation of inducible membranes in yeast. Molecular Biology of the Cell. 13: 40-51. PMID 11809821 DOI: 10.1091/mbc.01-07-0366  0.2
2002 Cui Y, Wong WH, Bornberg-Bauer E, Chan HS. Recombinatoric exploration of novel folded structures: a heteropolymer-based model of protein evolutionary landscapes. Proceedings of the National Academy of Sciences of the United States of America. 99: 809-14. PMID 11805332 DOI: 10.1073/pnas.022240299  0.2
2001 Bhattacharjee A, Richards WG, Staunton J, Li C, Monti S, Vasa P, Ladd C, Beheshti J, Bueno R, Gillette M, Loda M, Weber G, Mark EJ, Lander ES, Wong W, et al. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses. Proceedings of the National Academy of Sciences of the United States of America. 98: 13790-5. PMID 11707567 DOI: 10.1073/pnas.191502998  0.2
2001 Hakak Y, Walker JR, Li C, Wong WH, Davis KL, Buxbaum JD, Haroutunian V, Fienberg AA. Genome-wide expression analysis reveals dysregulation of myelination-related genes in chronic schizophrenia. Proceedings of the National Academy of Sciences of the United States of America. 98: 4746-51. PMID 11296301 DOI: 10.1073/pnas.081071198  0.2
2001 Liang F, Wong WH. Evolutionary Monte Carlo for protein folding simulations Journal of Chemical Physics. 115: 3374-3380. DOI: 10.1063/1.1387478  0.2
1999 Wu X, Wen J, Wong WH. Conditional entropy coding of VQ indexes for image compression Ieee Transactions On Image Processing. 8: 1005-1013. DOI: 10.1109/83.777082  0.2
1998 Cui Y, Chen RS, Wong WH. Molecular dynamic simulation of chaperonin-mediated protein folding. Journal of Protein Chemistry. 17: 377-80. PMID 9619590 DOI: 10.1023/A:1022511417343  0.2
1998 Cui Y, Chen RS, Wong WH. Protein folding simulation with genetic algorithm and supersecondary structure constraints. Proteins. 31: 247-57. PMID 9593196 DOI: 10.1002/(SICI)1097-0134(19980515)31:3<247::AID-PROT2>3.0.CO;2-G  0.2
1997 Wong WH, Liang F. Dynamic weighting in Monte Carlo and optimization Proceedings of the National Academy of Sciences of the United States of America. 94: 14220-14224. DOI: 10.1073/pnas.94.26.14220  0.2
1994 Ouyang X, Wong WH, Johnson VE, Hu X, Chen CT. Incorporation of Correlated Structural Images in PET Image Reconstruction Ieee Transactions On Medical Imaging. 13: 627-640. DOI: 10.1109/42.363105  0.2
1994 Liu JS, Wong WH, Kong A. Covariance structure of the Gibbs sampler with applications to the comparisons of estimators and augmentation schemes Biometrika. 81: 27-40. DOI: 10.1093/biomet/81.1.27  0.2
1992 Wong WH, Li B. Laplace expansion for posterior densities of nonlinear functions of parameters Biometrika. 79: 393-398. DOI: 10.1093/biomet/79.2.393  0.2
1991 Wong WH, Hu X, Chen CT, Johnson VE. Image Restoration Using Gibbs Priors: Boundary Modeling, Treatment of Blurring, and Selection of Hyperparameter Ieee Transactions On Pattern Analysis and Machine Intelligence. 13: 413-425. DOI: 10.1109/34.134041  0.2
1991 Chen CT, Ouyang X, Ordonez C, Metz CE, Wong WH, Hu X, Johnson VE. Sensor Fusion In Image Reconstruction Ieee Transactions On Nuclear Science. 38: 687-692. DOI: 10.1109/23.289375  0.2
1990 Chen CT, Hu X, Metz CE, Johnson VE, Wong WH. Bayesian image reconstruction in positron emission tomography Ieee Transactions On Nuclear Science. 37: 636-641. DOI: 10.1109/23.106690  0.2
1990 Leung SF, Wong WH. Nonparametric hazard estimation with time-varying discrete covariates Journal of Econometrics. 45: 309-330. DOI: 10.1016/0304-4076(90)90002-B  0.2
1987 Tanner MA, Wong WH. The calculation of posterior distributions by data augmentation Journal of the American Statistical Association. 82: 528-540. DOI: 10.1080/01621459.1987.10478458  0.2
2020 Zhang S, Zhang X, Purmann C, Ma S, Shrestha A, Davis KN, Ho M, Huang Y, Pattni R, Wong WH, Bernstein JA, Hallmayer J, Urban AE. Network Effects of the 15q13.3 Microdeletion on the Transcriptome and Epigenome in Human-Induced Neurons. Biological Psychiatry. PMID 32919612 DOI: 10.1016/j.biopsych.2020.06.021  0.16
2019 Zhou B, Ho SS, Greer SU, Spies N, Bell JM, Zhang X, Zhu X, Arthur JG, Byeon S, Pattni R, Saha I, Huang Y, Song G, Perrin D, Wong WH, et al. Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2. Nucleic Acids Research. PMID 30864654 DOI: 10.1093/nar/gkz169  0.16
2019 Zhou B, Ho SS, Greer SU, Zhu X, Bell JM, Arthur JG, Spies N, Zhang X, Byeon S, Pattni R, Ben-Efraim N, Haney MS, Haraksingh RR, Song G, Ji HP, ... ... Wong WH, et al. Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562. Genome Research. PMID 30737237 DOI: 10.1101/gr.234948.118  0.16
2016 Jiang H, Mu JC, Yang K, Du C, Lu L, Wong WH. Computational Aspects of Optional Pólya Tree. Journal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America. 25: 301-320. PMID 27217713 DOI: 10.1080/10618600.2014.1002927  0.16
2014 Meister A, Du C, Li YH, Wong WH. Modeling stochastic noise in gene regulatory systems. Quantitative Biology. 2: 1-29. PMID 25632368 DOI: 10.1007/s40484-014-0025-7  0.16
2013 Brady JJ, Li M, Suthram S, Jiang H, Wong WH, Blau HM. Early role for IL-6 signalling during generation of induced pluripotent stem cells revealed by heterokaryon RNA-Seq. Nature Cell Biology. 15: 1244-52. PMID 23995732 DOI: 10.1038/ncb2835  0.16
2012 Peterson KA, Nishi Y, Ma W, Vedenko A, Shokri L, Zhang X, McFarlane M, Baizabal JM, Junker JP, van Oudenaarden A, Mikkelsen T, Bernstein BE, Bailey TL, Bulyk ML, Wong WH, et al. Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning. Genes & Development. 26: 2802-16. PMID 23249739 DOI: 10.1101/gad.207142.112  0.16
2012 Lee J, Sayed N, Hunter A, Au KF, Wong WH, Mocarski ES, Pera RR, Yakubov E, Cooke JP. Activation of innate immunity is required for efficient nuclear reprogramming. Cell. 151: 547-58. PMID 23101625 DOI: 10.1016/j.cell.2012.09.034  0.16
2011 Ding Z, Wu CJ, Chu GC, Xiao Y, Ho D, Zhang J, Perry SR, Labrot ES, Wu X, Lis R, Hoshida Y, Hiller D, Hu B, Jiang S, Zheng H, ... ... Wong WH, et al. SMAD4-dependent barrier constrains prostate cancer growth and metastatic progression. Nature. 470: 269-73. PMID 21289624 DOI: 10.1038/nature09677  0.16
2010 Lee EY, Ji H, Ouyang Z, Zhou B, Ma W, Vokes SA, McMahon AP, Wong WH, Scott MP. Hedgehog pathway-regulated gene networks in cerebellum development and tumorigenesis. Proceedings of the National Academy of Sciences of the United States of America. 107: 9736-41. PMID 20460306 DOI: 10.1073/pnas.1004602107  0.16
2010 Li J, Jiang H, Wong WH. Modeling non-uniformity in short-read rates in RNA-Seq data. Genome Biology. 11: R50. PMID 20459815 DOI: 10.1186/gb-2010-11-5-r50  0.16
2009 Paik JH, Ding Z, Narurkar R, Ramkissoon S, Muller F, Kamoun WS, Chae SS, Zheng H, Ying H, Mahoney J, Hiller D, Jiang S, Protopopov A, Wong WH, Chin L, et al. FoxOs cooperatively regulate diverse pathways governing neural stem cell homeostasis. Cell Stem Cell. 5: 540-53. PMID 19896444 DOI: 10.1016/j.stem.2009.09.013  0.16
2009 Nishi Y, Ji H, Wong WH, McMahon AP, Vokes SA. Modeling the spatio-temporal network that drives patterning in the vertebrate central nervous system. Biochimica Et Biophysica Acta. 1789: 299-305. PMID 19445894 DOI: 10.1016/j.bbagrm.2009.01.002  0.16
2008 Zheng H, Ying H, Yan H, Kimmelman AC, Hiller DJ, Chen AJ, Perry SR, Tonon G, Chu GC, Ding Z, Stommel JM, Dunn KL, Wiedemeyer R, You MJ, Brennan C, ... ... Wong WH, et al. Pten and p53 converge on c-Myc to control differentiation, self-renewal, and transformation of normal and neoplastic stem cells in glioblastoma. Cold Spring Harbor Symposia On Quantitative Biology. 73: 427-37. PMID 19150964 DOI: 10.1101/sqb.2008.73.047  0.16
2008 Zheng H, Ying H, Yan H, Kimmelman AC, Hiller DJ, Chen AJ, Perry SR, Tonon G, Chu GC, Ding Z, Stommel JM, Dunn KL, Wiedemeyer R, You MJ, Brennan C, ... ... Wong WH, et al. p53 and Pten control neural and glioma stem/progenitor cell renewal and differentiation. Nature. 455: 1129-33. PMID 18948956 DOI: 10.1038/nature07443  0.16
2008 Vokes SA, Ji H, Wong WH, McMahon AP. A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog-mediated patterning of the mammalian limb. Genes & Development. 22: 2651-63. PMID 18832070 DOI: 10.1101/gad.1693008  0.16
2007 Paik JH, Kollipara R, Chu G, Ji H, Xiao Y, Ding Z, Miao L, Tothova Z, Horner JW, Carrasco DR, Jiang S, Gilliland DG, Chin L, Wong WH, Castrillon DH, et al. FoxOs are lineage-restricted redundant tumor suppressors and regulate endothelial cell homeostasis. Cell. 128: 309-23. PMID 17254969 DOI: 10.1016/j.cell.2006.12.029  0.16
2005 Dannenberg JH, David G, Zhong S, van der Torre J, Wong WH, Depinho RA. mSin3A corepressor regulates diverse transcriptional networks governing normal and neoplastic growth and survival. Genes & Development. 19: 1581-95. PMID 15998811 DOI: 10.1101/gad.1286905  0.16
2005 Bardeesy N, Kim M, Xu J, Kim RS, Shen Q, Bosenberg MW, Wong WH, Chin L. Role of epidermal growth factor receptor signaling in RAS-driven melanoma. Molecular and Cellular Biology. 25: 4176-88. PMID 15870287 DOI: 10.1128/MCB.25.10.4176-4188.2005  0.16
2004 Bachoo RM, Kim RS, Ligon KL, Maher EA, Brennan C, Billings N, Chan S, Li C, Rowitch DH, Wong WH, DePinho RA. Molecular diversity of astrocytes with implications for neurological disorders. Proceedings of the National Academy of Sciences of the United States of America. 101: 8384-9. PMID 15155908 DOI: 10.1073/pnas.0402140101  0.16
2015 Taylor SE, Li YH, Smeriglio P, Rath M, Wong WH, Bhutani N. Stable 5-Hydroxymethylcytosine (5hmC) Acquisition Marks Gene Activation During Chondrogenic Differentiation. Journal of Bone and Mineral Research : the Official Journal of the American Society For Bone and Mineral Research. PMID 26363184 DOI: 10.1002/jbmr.2711  0.12
2015 Taylor SE, Henry Li Y, Wong WH, Bhutani N. Genome-wide mapping of DNA hydroxymethylation in osteoarthritic chondrocytes. Arthritis & Rheumatology (Hoboken, N.J.). PMID 25940674 DOI: 10.1002/art.39179  0.12
2009 Hiller D, Jiang H, Xu W, Wong WH. Identifiability of isoform deconvolution from junction arrays and RNA-Seq. Bioinformatics (Oxford, England). 25: 3056-9. PMID 19762346 DOI: 10.1093/bioinformatics/btp544  0.12
2004 Xu XQ, Leow CK, Lu X, Zhang X, Liu JS, Wong WH, Asperger A, Deininger S, Eastwood Leung HC. Molecular classification of liver cirrhosis in a rat model by proteomics and bioinformatics. Proteomics. 4: 3235-45. PMID 15378689 DOI: 10.1002/pmic.200400839  0.12
2003 Zhong S, Li C, Wong WH. ChipInfo: Software for extracting gene annotation and gene ontology information for microarray analysis. Nucleic Acids Research. 31: 3483-6. PMID 12824349  0.12
2002 Zhou X, Kao MC, Wong WH. Transitive functional annotation by shortest-path analysis of gene expression data. Proceedings of the National Academy of Sciences of the United States of America. 99: 12783-8. PMID 12196633 DOI: 10.1073/pnas.192159399  0.12
2017 Sahraeian SME, Mohiyuddin M, Sebra R, Tilgner H, Afshar PT, Au KF, Bani Asadi N, Gerstein MB, Wong WH, Snyder MP, Schadt E, Lam HYK. Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis. Nature Communications. 8: 59. PMID 28680106 DOI: 10.1038/s41467-017-00050-4  0.08
2016 Li D, Yang K, Wong WH. Density Estimation via Discrepancy Based Adaptive Sequential Partition. Advances in Neural Information Processing Systems. 29: 1091-1099. PMID 31327913  0.08
2016 Jiang H, Mu JC, Yang K, Du C, Lu L, Wong WH. Computational Aspects of Optional Pólya Tree Journal of Computational and Graphical Statistics. 25: 301-320. DOI: 10.1080/10618600.2014.1002927  0.08
2015 Fang LT, Afshar PT, Chhibber A, Mohiyuddin M, Fan Y, Mu JC, Gibeling G, Barr S, Asadi NB, Gerstein MB, Koboldt DC, Wang W, Wong WH, Lam HY. An ensemble approach to accurately detect somatic mutations using SomaticSeq. Genome Biology. 16: 197. PMID 26381235 DOI: 10.1186/s13059-015-0758-2  0.08
2009 Zhou Q, Wong WH. Energy landscape of a spin-glass model: exploration and characterization. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 051117. PMID 19518426 DOI: 10.1103/PhysRevE.79.051117  0.08
2009 Lin L, Liu S, Brockway H, Seok J, Jiang P, Wong WH, Xing Y. Using high-density exon arrays to profile gene expression in closely related species. Nucleic Acids Research. 37: e90. PMID 19474342 DOI: 10.1093/nar/gkp420  0.08
2008 Ji H, Jiang H, Ma W, Johnson DS, Myers RM, Wong WH. An integrated software system for analyzing ChIP-chip and ChIP-seq data. Nature Biotechnology. 26: 1293-300. PMID 18978777 DOI: 10.1038/nbt.1505  0.08
2007 Kapur K, Xing Y, Ouyang Z, Wong WH. Exon arrays provide accurate assessments of gene expression. Genome Biology. 8: R82. PMID 17504534 DOI: 10.1186/gb-2007-8-5-r82  0.08
2006 Kou SC, Oh J, Wong WH. A study of density of states and ground states in hydrophobic-hydrophilic protein folding models by equi-energy sampling. The Journal of Chemical Physics. 124: 244903. PMID 16821999 DOI: 10.1063/1.2208607  0.08
2005 Hong P, Liu XS, Zhou Q, Lu X, Liu JS, Wong WH. A boosting approach for motif modeling using ChIP-chip data. Bioinformatics (Oxford, England). 21: 2636-43. PMID 15817698 DOI: 10.1093/bioinformatics/bti402  0.08
2000 Cui Y, Chen RS, Wong WH. The coevolution of cell senescence and diploid sexual reproduction in unicellular organisms. Proceedings of the National Academy of Sciences of the United States of America. 97: 3330-5. PMID 10737794 DOI: 10.1073/PNAS.97.7.3330  0.08
2018 Lai BC, Wu TY, Chiu TH, Li KC, Lee CY, Chien WC, Wong WH. Towards High Performance Data Analytic on Heterogeneous Many-core Systems: A Study on Bayesian Sequential Partitioning. Journal of Parallel and Distributed Computing. 122: 36-50. PMID 30872894 DOI: 10.1016/j.jpdc.2018.07.011  0.04
2011 Ji H, Jiang H, Ma W, Wong WH. Using CisGenome to analyze ChIP-chip and ChIP-seq data. Current Protocols in Bioinformatics. Unit2.13. PMID 21400695 DOI: 10.1002/0471250953.bi0213s33  0.04
2010 Jiang H, Wang F, Dyer NP, Wong WH. CisGenome Browser: a flexible tool for genomic data visualization. Bioinformatics (Oxford, England). 26: 1781-2. PMID 20513664 DOI: 10.1093/bioinformatics/btq286  0.04
2009 Reijo Pera RA, DeJonge C, Bossert N, Yao M, Hwa Yang JY, Asadi NB, Wong W, Wong C, Firpo MT. Gene expression profiles of human inner cell mass cells and embryonic stem cells. Differentiation; Research in Biological Diversity. 78: 18-23. PMID 19398262 DOI: 10.1016/j.diff.2009.03.004  0.04
2008 Kapur K, Jiang H, Xing Y, Wong WH. Cross-hybridization modeling on Affymetrix exon arrays. Bioinformatics (Oxford, England). 24: 2887-93. PMID 18984598 DOI: 10.1093/bioinformatics/btn571  0.04
2008 Xing Y, Stoilov P, Kapur K, Han A, Jiang H, Shen S, Black DL, Wong WH. MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays. Rna (New York, N.Y.). 14: 1470-9. PMID 18566192 DOI: 10.1261/rna.1070208  0.04
2006 Kou SC, Zhou Q, Wong WH. Equi-energy sampler with applications in statistical inference and statistical mechanics The Annals of Statistics. 34: 1581-1619. DOI: 10.1214/009053606000000515  0.04
2005 Bonome T, Park DC, Hao K, Donninger H, Radonovich M, Brady J, Barrett JC, Wong WH, Welch WR, Mok SC, Birrer MJ. Identification of a gene signature that can predict lone-term survival in patients with high-grade late stage serous ovarian cancer. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 23: 5032. PMID 27946291 DOI: 10.1200/jco.2005.23.16_suppl.5032  0.04
2004 Cui Y, Zhou M, Wong WH. Integrated analysis of microarray data and gene function information. Omics : a Journal of Integrative Biology. 8: 106-17. PMID 15268770 DOI: 10.1089/1536231041388320  0.04
2004 Huang H, Kao MC, Zhou X, Liu JS, Wong WH. Determination of local statistical significance of patterns in Markov sequences with application to promoter element identification. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 11: 1-14. PMID 15072685 DOI: 10.1089/106652704773416858  0.04
2003 Zhou X, Krueger JG, Kao MC, Lee E, Du F, Menter A, Wong WH, Bowcock AM. Novel mechanisms of T-cell and dendritic cell activation revealed by profiling of psoriasis on the 63,100-element oligonucleotide array. Physiological Genomics. 13: 69-78. PMID 12644634 DOI: 10.1152/physiolgenomics.00157.2002  0.04
2001 Tseng GC, Oh MK, Rohlin L, Liao JC, Wong WH. Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Research. 29: 2549-57. PMID 11410663 DOI: 10.1093/NAR/29.12.2549  0.04
1998 Wong WH, Cui Y, Chen RS. Torsional relaxation for biopolymers. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 5: 655-65. PMID 10072082 DOI: 10.1089/cmb.1998.5.655  0.04
1994 Shen X, Wong WH. Convergence Rate of Sieve Estimates The Annals of Statistics. 22: 580-615. DOI: 10.1214/AOS/1176325486  0.04
2020 Zhang Y, Ouyang Z, Qian W, Smith RD, Wong WH, Davis RW. Meta-analysis of peptides to detect protein significance Statistics and Its Interface. 13: 465-474. DOI: 10.4310/sii.2020.v13.n4.a4  0.01
2020 Lin Z, Zamanighomi M, Daley T, Ma S, Wong WH. Model-Based Approach to the Joint Analysis of Single-Cell Data on Chromatin Accessibility and Gene Expression Statistical Science. 35: 2-13. DOI: 10.1214/19-sts714  0.01
2019 Hsu H, Wu T, Wan S, Wong WH, Lee C. QuatNet: Quaternion-Based Head Pose Estimation With Multiregression Loss Ieee Transactions On Multimedia. 21: 1035-1046. DOI: 10.1109/TMM.2018.2866770  0.01
2017 Liu L, Li D, Wong WH. Convergence rates of a partition based Bayesian multivariate density estimation method. Advances in Neural Information Processing Systems. 30: 4738-4746. PMID 31341369  0.01
2017 Li YH, Li D, Samusik N, Wang X, Guan L, Nolan GP, Wong WH. Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks. Plos Computational Biology. 13: e1005875. PMID 29281633 DOI: 10.1371/journal.pcbi.1005875  0.01
2017 Afshar PT, Wong WH. COSINE: non-seeding method for mapping long noisy sequences. Nucleic Acids Research. PMID 28586438 DOI: 10.1093/nar/gkx511  0.01
2017 Tsai C, Yu W, Wong WH, Lee C. A 41.3/26.7 pJ per Neuron Weight RBM Processor Supporting On-Chip Learning/Inference for IoT Applications Ieee Journal of Solid-State Circuits. 52: 2601-2612. DOI: 10.1109/JSSC.2017.2715171  0.01
2015 Durruthy-Durruthy J, Sebastiano V, Wossidlo M, Cepeda D, Cui J, Grow EJ, Davila J, Mall M, Wong WH, Wysocka J, Au KF, Reijo Pera RA. The primate-specific noncoding RNA HPAT5 regulates pluripotency during human preimplantation development and nuclear reprogramming. Nature Genetics. PMID 26595768 DOI: 10.1038/ng.3449  0.01
2013 Hiller D, Wong WH. Simultaneous isoform discovery and quantification from RNA-seq. Statistics in Biosciences. 5: 100-118. PMID 23888185 DOI: 10.1007/s12561-012-9069-2  0.01
2013 Tan MH, Au KF, Leong DE, Foygel K, Wong WH, Yao MW. An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo. Molecular Systems Biology. 9: 632. PMID 23295861 DOI: 10.1038/msb.2012.65  0.01
2013 Lu L, Jiang H, Wong WH. Multivariate Density Estimation by Bayesian Sequential Partitioning Journal of the American Statistical Association. 108: 1402-1410. DOI: 10.1080/01621459.2013.813389  0.01
2012 . An integrated encyclopedia of DNA elements in the human genome. Nature. 489: 57-74. PMID 22955616 DOI: 10.1038/nature11247  0.01
2012 Mu JC, Jiang H, Kiani A, Mohiyuddin M, Bani Asadi N, Wong WH. Fast and accurate read alignment for resequencing. Bioinformatics (Oxford, England). 28: 2366-73. PMID 22811546 DOI: 10.1093/bioinformatics/bts450  0.01
2011 Salzman J, Jiang H, Wong WH. Statistical Modeling of RNA-Seq Data. Statistical Science : a Review Journal of the Institute of Mathematical Statistics. 26. PMID 24307754 DOI: 10.1214/10-STS343  0.01
2011 Zhou B, Wong WH. A bootstrap-based non-parametric ANOVA method with applications to factorial microarray data Statistica Sinica. 21: 495. DOI: 10.5705/SS.2011.023A  0.01
2010 Au KF, Jiang H, Lin L, Xing Y, Wong WH. Detection of splice junctions from paired-end RNA-seq data by SpliceMap. Nucleic Acids Research. 38: 4570-8. PMID 20371516 DOI: 10.1093/nar/gkq211  0.01
2010 Banerjee P, Choi B, Lathi R, Westphal L, Wong W, Yao M. Personalized prediction of live birth outcomes in IVF Fertility and Sterility. 94: S52-S53. DOI: 10.1016/j.fertnstert.2010.07.204  0.01
2008 Foygel K, Jun S, Leong D, Choi B, Wong W, Yao M. Embryonic stem cell (ESC) pluripotency regulators have novel and critical roles in pre-blastocyst development Fertility and Sterility. 90: S46. DOI: 10.1016/j.fertnstert.2008.07.664  0.01
2007 Zhou Q, Chipperfield H, Melton DA, Wong WH. A gene regulatory network in mouse embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America. 104: 16438-43. PMID 17940043 DOI: 10.1073/pnas.0701014104  0.01
2007 Beroukhim R, Lin M, Park Y, Hao K, Zhao X, Garraway LA, Fox EA, Hochberg EP, Mellinghoff IK, Hofer MD, Descazeaud A, Rubin MA, Meyerson M, Wong WH, Sellers WR, et al. Correction: Inferring Loss-of-Heterozygosity from Unpaired Tumors Using High-Density Oligonucleotide SNP Arrays Plos Computational Biology. 3: e40. DOI: 10.1371/journal.pcbi.0030040  0.01
2007 Zhou Q, Wong WH. Coupling hidden Markov models for the discovery of Cis-regulatory modules in multiple species The Annals of Applied Statistics. 1: 36-65. DOI: 10.1214/07-AOAS103  0.01
2007 Goswami G, Liu JS, Wong WH. Evolutionary Monte Carlo Methods for Clustering Journal of Computational and Graphical Statistics. 16: 855-876. DOI: 10.1198/106186007X255072  0.01
2007 Tse PC, Wong WH. Spring Stiffnesses of Composite Circular Springs Embedded with Nickel Titanium Alloy Wire Hkie Transactions. 14: 43-53. DOI: 10.1080/1023697X.2007.10668077  0.01
2006 Beroukhim R, Lin M, Park Y, Hao K, Zhao X, Garraway LA, Fox EA, Hochberg EP, Mellinghoff IK, Hofer MD, Descazeaud A, Rubin MA, Meyerson M, Wong WH, Sellers WR, et al. Inferring loss-of-heterozygosity from unpaired tumors using high-density oligonucleotide SNP arrays. Plos Computational Biology. 2: e41. PMID 16699594 DOI: 10.1371/journal.pcbi.0020041  0.01
2006 Kou SC, Zhou Q, Wong WH. Rejoinder The Annals of Statistics. 34: 1646-1652. DOI: 10.1214/009053606000000524  0.01
2006 Vokes SA, Ji H, Wong WH, McMahon AP. A tale of two morphogen gradients: Identifying Gli targets of Hedgehog Signaling Developmental Biology. 295: 423. DOI: 10.1016/j.ydbio.2006.04.301  0.01
2006 Kim SW, Hufton A, Wong W, Baker J. Genomic analysis of endoderm transcription in Xenopus Developmental Biology. 295: 391. DOI: 10.1016/j.ydbio.2006.04.200  0.01
2005 Leykin I, Kao MC, Wong WH. HumanUpstream and MouseUpstream: databases of promoter sequences in the human and mouse genomes. Omics : a Journal of Integrative Biology. 9: 220-4. PMID 16209636 DOI: 10.1089/omi.2005.9.220  0.01
2005 Zhou XJ, Kao MC, Huang H, Wong A, Nunez-Iglesias J, Primig M, Aparicio OM, Finch CE, Morgan TE, Wong WH. Functional annotation and network reconstruction through cross-platform integration of microarray data. Nature Biotechnology. 23: 238-43. PMID 15654329 DOI: 10.1038/nbt1058  0.01
2003 Shen X, Tseng GC, Zhang X, Wong WH. On ψ-Learning Journal of the American Statistical Association. 98: 724-734. DOI: 10.1198/016214503000000639  0.01
2003 Tam HL, Huber R, Li KF, Wong WH, Pun YB, So SK, Cheah KW. Active textured metallic microcavity Physica E: Low-Dimensional Systems and Nanostructures. 17: 446-448. DOI: 10.1016/S1386-9477(02)00831-7  0.01
2002 Lai HM, Lau YP, Wong WH. Understanding wave characteristics via linear superposition of retarded fields American Journal of Physics. 70: 173-179. DOI: 10.1119/1.1427085  0.01
2002 Storch K, Lipan O, Leykin I, Viswanathan N, Davis FC, Wong WH, Weitz CJ. Erratum: corrigendum: Extensive and divergent circadian gene expression in liver and heart Nature. 418: 665-665. DOI: 10.1038/nature00960  0.01
2002 Hakak Y, Walker J, Li C, Wong W, Davis K, Buxbaum J, Haroutunian V, Fienberg A. Genome-wide expression analysis reveals dyregulation of myelination-related genes in chronic schizophrenia European Psychiatry. 17: 24. DOI: 10.1016/S0924-9338(02)80108-0  0.01
2001 Liang F, Wong WH. Real-Parameter Evolutionary Monte Carlo With Applications to Bayesian Mixture Models Journal of the American Statistical Association. 96: 653-666. DOI: 10.1198/016214501753168325  0.01
2001 Liu JS, Liang F, Wong WH. A Theory for Dynamic Weighting in Monte Carlo Computation Journal of the American Statistical Association. 96: 561-573. DOI: 10.1198/016214501753168253  0.01
2001 Wong WH, Pun EYB. Exposure characteristics and three-dimensional profiling of SU8C resist using electron beam lithography Journal of Vacuum Science and Technology B: Microelectronics and Nanometer Structures. 19: 732-735. DOI: 10.1116/1.1368678  0.01
2001 Li C, Wong WH. Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection Proceedings of the National Academy of Sciences. 98: 31-36. DOI: 10.1073/PNAS.98.1.31  0.01
2000 Wong WH. Computational Molecular Biology Journal of the American Statistical Association. 95: 322-326. DOI: 10.1080/01621459.2000.10473934  0.01
2000 Liu JS, Liang F, Wong WH. The Multiple-Try Method and Local Optimization in Metropolis Sampling Journal of the American Statistical Association. 95: 121-134. DOI: 10.1080/01621459.2000.10473908  0.01
1999 Shen X, Shi J, Wong WH. Random Sieve Likelihood and General Regression Models Journal of the American Statistical Association. 94: 835-846. DOI: 10.1080/01621459.1999.10474188  0.01
1999 Clark WG, Hanson ME, Wong WH, Alavi B. NMR investigation of spin density wave repinning in (TMTSF)2PF6 Le Journal De Physique Iv. 9: Pr10-3-Pr10-3. DOI: 10.1051/jp4:19991001  0.01
1999 Liang F, Wong WH. Dynamic weighting in simulations of spin systems Physics Letters A. 252: 257-262. DOI: 10.1016/S0375-9601(99)00006-7  0.01
1998 Liu JS, Chen R, Wong WH. Rejection Control and Sequential Importance Sampling Journal of the American Statistical Association. 93: 1022-1031. DOI: 10.1080/01621459.1998.10473764  0.01
1998 Wong W, Lo C. Optimal coupled-cluster approximation for the ground-state properties of a spin-boson model The European Physical Journal B. 6: 213-223. DOI: 10.1007/S100510050544  0.01
1997 Kong A, Liu JS, Wong WH. The properties of the cross-match estimate and split sampling The Annals of Statistics. 25: 2410-2432. DOI: 10.1214/AOS/1030741079  0.01
1996 Seltzer MH, Wong WH, Bryk AS. Bayesian Analysis in Applications of Hierarchical Models: Issues and Methods Journal of Educational and Behavioral Statistics. 21: 131-167. DOI: 10.3102/10769986021002131  0.01
1995 Wong WH. Comment Statistical Science. 10: 52-53. DOI: 10.1214/ss/1177010128  0.01
1995 Wong WH, Shen X. Probability Inequalities for Likelihood Ratios and Convergence Rates of Sieve MLES The Annals of Statistics. 23: 339-362. DOI: 10.1214/AOS/1176324524  0.01
1995 Liu JS, Wong WH, Kong A. Covariance Structure and Convergence Rate of the Gibbs Sampler with Various Scans Journal of the Royal Statistical Society: Series B (Methodological). 57: 157-169. DOI: 10.1111/J.2517-6161.1995.TB02021.X  0.01
1994 Kong A, Liu JS, Wong WH. Sequential Imputations and Bayesian Missing Data Problems Journal of the American Statistical Association. 89: 278-288. DOI: 10.1080/01621459.1994.10476469  0.01
1993 Chen C, Kapp OH, Wong WH. STOCHASTIC RECONSTRUCTION OF INCOMPLETE DATA SETS USING GIBBS PRIORS IN POSITRON EMISSION TOMOGRAPHY Investigative Radiology. 28: 1210. DOI: 10.1097/00004424-199312000-00138  0.01
1993 CLARK WG, HANSON ME, WONG WH, ALAVI B. Proton NMR study of spin density wave thermal fluctuations in (TMTSF)2PF6, where TMTSF is tetramethyltetraselenafulvalene Le Journal De Physique Iv. 3: C2-235-C2-242. DOI: 10.1051/JP4:1993247  0.01
1992 Severini TA, Wong WH. Profile Likelihood and Conditionally Parametric Models The Annals of Statistics. 20: 1768-1802. DOI: 10.1214/AOS/1176348889  0.01
1992 Ouyang X, Chen C-, Wong WH, Cooper M. IMPROVING IMAGE QUALITIES IN NUCLEAR MEDICINE BY BAYESIAN PROCESSING TECHNIQUE Investigative Radiology. 27: 1106. DOI: 10.1097/00004424-199212000-00130  0.01
1992 Pan X, Liu J, Chen C-, Wong WH. ATTENUATION CORRECTION IN SPECT Investigative Radiology. 27: 1106. DOI: 10.1097/00004424-199212000-00129  0.01
1991 Wong WH, Severini TA. On Maximum Likelihood Estimation in Infinite Dimensional Parameter Spaces The Annals of Statistics. 19: 603-632. DOI: 10.1214/AOS/1176348113  0.01
1987 Tanner MA, Wong WH. The Calculation of Posterior Distributions by Data Augmentation: Rejoinder Journal of the American Statistical Association. 82: 548. DOI: 10.2307/2289463  0.01
1987 Dempster AP. The Calculation of Posterior Distributions by Data Augmentation: Comment Journal of the American Statistical Association. 82: 541. DOI: 10.2307/2289458  0.01
1987 Dyn N, Wong WH. On the characterization of non-negative volume-matching surface splines Journal of Approximation Theory. 51: 1-10. DOI: 10.1016/0021-9045(87)90089-X  0.01
1986 Wong WH. Theory of Partial Likelihood The Annals of Statistics. 14: 88-123. DOI: 10.1214/aos/1176349844  0.01
1984 Tanner MA, Wong WH. Data-Based nonparametric estimation of the hazard function with applications to model diagnostics and exploratory analysis Journal of the American Statistical Association. 79: 174-182. DOI: 10.1080/01621459.1984.10477081  0.01
1984 Wong WH. On constrained multivariate splines and their approximations Numerische Mathematik. 43: 141-152. DOI: 10.1007/BF01389643  0.01
1983 Tanner MA, Wong WH. A Reanalysis of the Standford Heart Transplant Data: Comment Journal of the American Statistical Association. 78: 286. DOI: 10.2307/2288626  0.01
1983 Wong WH. On the Consistency of Cross-Validation in Kernel Nonparametric Regression The Annals of Statistics. 11: 1136-1141. DOI: 10.1214/aos/1176346327  0.01
1983 Tanner MA, Wong WH. The Estimation of the Hazard Function from Randomly Censored Data by the Kernel Method The Annals of Statistics. 11: 989-993. DOI: 10.1214/aos/1176346265  0.01
1983 Wong WH. A note on the modified likelihood for density estimation Journal of the American Statistical Association. 78: 461-463. DOI: 10.1080/01621459.1983.10477995  0.01
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