| Year |
Citation |
Score |
| 2024 |
Urzúa-Traslaviña CG, van Lieshout T, Boulogne F, Domanegg K, Zidan M, Bakker OB, Claringbould A, de Ridder J, Zwart W, Westra HJ, Deelen P, Franke L. Co-expression in tissue-specific gene networks links genes in cancer-susceptibility loci to known somatic driver genes. Bmc Medical Genomics. 17: 186. PMID 39010058 DOI: 10.1186/s12920-024-01941-4 |
0.748 |
|
| 2024 |
Vochteloo M, Deelen P, Vink B, Tsai EA, Runz H, Andreu-Sánchez S, Fu J, Zhernakova A, Westra HJ, Franke L. PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs. Genome Biology. 25: 29. PMID 38254182 DOI: 10.1186/s13059-023-03151-0 |
0.77 |
|
| 2023 |
Sadler MC, Auwerx C, Deelen P, Kutalik Z. Multi-layered genetic approaches to identify approved drug targets. Cell Genomics. 3: 100341. PMID 37492104 DOI: 10.1016/j.xgen.2023.100341 |
0.306 |
|
| 2023 |
Cato LD, Li R, Lu HY, Yu F, Wissman M, Mkumbe BS, Ekwattanakit S, Deelen P, Mwita L, Sangeda RZ, Suksangpleng T, Riolueang S, Bronson PG, Paul DS, Kawabata E, et al. Genetic regulation of fetal hemoglobin across global populations. Medrxiv : the Preprint Server For Health Sciences. PMID 36993312 DOI: 10.1101/2023.03.24.23287659 |
0.72 |
|
| 2023 |
de Klein N, Tsai EA, Vochteloo M, Baird D, Huang Y, Chen CY, van Dam S, Oelen R, Deelen P, Bakker OB, El Garwany O, Ouyang Z, Marshall EE, Zavodszky MI, van Rheenen W, et al. Brain expression quantitative trait locus and network analyses reveal downstream effects and putative drivers for brain-related diseases. Nature Genetics. PMID 36823318 DOI: 10.1038/s41588-023-01300-6 |
0.754 |
|
| 2023 |
Boulogne F, Claus LR, Wiersma H, Oelen R, Schukking F, de Klein N, Li S, Westra HJ, van der Zwaag B, van Reekum F, Sierks D, Schönauer R, Li Z, Bijlsma EK, Bos WJW, ... ... Deelen P, et al. KidneyNetwork: using kidney-derived gene expression data to predict and prioritize novel genes involved in kidney disease. European Journal of Human Genetics : Ejhg. PMID 36807342 DOI: 10.1038/s41431-023-01296-x |
0.772 |
|
| 2023 |
Lopera-Maya EA, Li S, de Brouwer R, Nolte IM, van Breen J, Jongbloed JDH, Swertz MA, Snieder H, Franke L, Wijmenga C, de Boer RA, Deelen P, van der Zwaag PA, Sanna S. Phenotypic and Genetic Factors Associated with Absence of Cardiomyopathy Symptoms in PLN:c.40_42delAGA Carriers. Journal of Cardiovascular Translational Research. PMID 36622581 DOI: 10.1007/s12265-022-10347-5 |
0.792 |
|
| 2022 |
Warmerdam CAR, Wiersma HH, Lanting P, Ani A, Dijkema MXL, Snieder H, Vonk JM, Boezen HM, Deelen P, Franke LH. Increased genetic contribution to wellbeing during the COVID-19 pandemic. Plos Genetics. 18: e1010135. PMID 35588108 DOI: 10.1371/journal.pgen.1010135 |
0.663 |
|
| 2022 |
Hop PJ, Zwamborn RAJ, Hannon E, Shireby GL, Nabais MF, Walker EM, van Rheenen W, van Vugt JJFA, Dekker AM, Westeneng HJ, Tazelaar GHP, van Eijk KR, Moisse M, Baird D, Al Khleifat A, ... ... Deelen P, ... ... Deelen P, et al. Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS. Science Translational Medicine. 14: eabj0264. PMID 35196023 DOI: 10.1126/scitranslmed.abj0264 |
0.774 |
|
| 2022 |
van Rheenen W, van der Spek RAA, Bakker MK, van Vugt JJFA, Hop PJ, Zwamborn RAJ, de Klein N, Westra HJ, Bakker OB, Deelen P, Shireby G, Hannon E, Moisse M, Baird D, Restuadi R, et al. Author Correction: Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology. Nature Genetics. PMID 35102318 DOI: 10.1038/s41588-022-01020-3 |
0.769 |
|
| 2021 |
van Rheenen W, van der Spek RAA, Bakker MK, van Vugt JJFA, Hop PJ, Zwamborn RAJ, de Klein N, Westra HJ, Bakker OB, Deelen P, Shireby G, Hannon E, Moisse M, Baird D, Restuadi R, et al. Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology. Nature Genetics. 53: 1636-1648. PMID 34873335 DOI: 10.1038/s41588-021-00973-1 |
0.787 |
|
| 2021 |
Warmerdam R, Lanting P, Deelen P, Franke L. Idéfix: identifying accidental sample mix-ups in biobanks using polygenic scores. Bioinformatics (Oxford, England). PMID 34792549 DOI: 10.1093/bioinformatics/btab783 |
0.652 |
|
| 2021 |
Võsa U, Claringbould A, Westra HJ, Bonder MJ, Deelen P, Zeng B, Kirsten H, Saha A, Kreuzhuber R, Yazar S, Brugge H, Oelen R, de Vries DH, van der Wijst MGP, Kasela S, et al. Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression. Nature Genetics. PMID 34475573 DOI: 10.1038/s41588-021-00913-z |
0.821 |
|
| 2021 |
van Blokland IV, Lanting P, Ori APS, Vonk JM, Warmerdam RCA, Herkert JC, Boulogne F, Claringbould A, Lopera-Maya EA, Bartels M, Hottenga JJ, Ganna A, Karjalainen J, ... ... Deelen P, et al. Using symptom-based case predictions to identify host genetic factors that contribute to COVID-19 susceptibility. Plos One. 16: e0255402. PMID 34379666 DOI: 10.1371/journal.pone.0255402 |
0.669 |
|
| 2021 |
Ruth KS, Day FR, Hussain J, Martínez-Marchal A, Aiken CE, Azad A, Thompson DJ, Knoblochova L, Abe H, Tarry-Adkins JL, Gonzalez JM, Fontanillas P, Claringbould A, Bakker OB, Sulem P, ... ... Deelen P, et al. Genetic insights into biological mechanisms governing human ovarian ageing. Nature. PMID 34349265 DOI: 10.1038/s41586-021-03779-7 |
0.654 |
|
| 2021 |
Mc Intyre K, Lanting P, Deelen P, Wiersma HH, Vonk JM, Ori APS, Jankipersadsing SA, Warmerdam R, van Blokland I, Boulogne F, Dijkema MXL, Herkert JC, Claringbould A, Bakker O, Lopera Maya EA, et al. Lifelines COVID-19 cohort: investigating COVID-19 infection and its health and societal impacts in a Dutch population-based cohort. Bmj Open. 11: e044474. PMID 33737436 DOI: 10.1136/bmjopen-2020-044474 |
0.743 |
|
| 2020 |
van der Velde KJ, van den Hoek S, van Dijk F, Hendriksen D, van Diemen CC, Johansson LF, Abbott KM, Deelen P, Sikkema-Raddatz B, Swertz MA. A pipeline-friendly software tool for genome diagnostics to prioritize genes by matching patient symptoms to literature. Advanced Genetics (Hoboken, N.J.). 1: e10023. PMID 36619248 DOI: 10.1002/ggn2.10023 |
0.52 |
|
| 2020 |
van der Velde KJ, van den Hoek S, van Dijk F, Hendriksen D, van Diemen CC, Johansson LF, Abbott KM, Deelen P, Sikkema-Raddatz B, Swertz MA. A pipeline-friendly software tool for genome diagnostics to prioritize genes by matching patient symptoms to literature. Advanced Genetics (Hoboken, N.J.). 1: e10023. PMID 36619248 DOI: 10.1002/ggn2.10023 |
0.52 |
|
| 2020 |
Li S, van der Velde KJ, de Ridder D, van Dijk ADJ, Soudis D, Zwerwer LR, Deelen P, Hendriksen D, Charbon B, van Gijn ME, Abbott K, Sikkema-Raddatz B, van Diemen CC, Kerstjens-Frederikse WS, Sinke RJ, et al. CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations. Genome Medicine. 12: 75. PMID 32831124 DOI: 10.1186/S13073-020-00775-W |
0.548 |
|
| 2020 |
Lopera Maya EA, van der Graaf A, Lanting P, van der Geest M, Fu J, Swertz M, Franke L, Wijmenga C, Deelen P, Zhernakova A, Sanna S. Lack of Association Between Genetic Variants at and Genes Involved in SARS-CoV-2 Infection and Human Quantitative Phenotypes. Frontiers in Genetics. 11: 613. PMID 32582302 DOI: 10.3389/Fgene.2020.00613 |
0.82 |
|
| 2020 |
Aguirre-Gamboa R, de Klein N, di Tommaso J, Claringbould A, van der Wijst MG, de Vries D, Brugge H, Oelen R, Võsa U, Zorro MM, Chu X, Bakker OB, Borek Z, Ricaño-Ponce I, Deelen P, et al. Deconvolution of bulk blood eQTL effects into immune cell subpopulations. Bmc Bioinformatics. 21: 243. PMID 32532224 DOI: 10.1186/S12859-020-03576-5 |
0.784 |
|
| 2020 |
Hauer AJ, Kleinloog R, Giuliani F, Rinkel GJE, de Kort GA, Berkelbach van der Sprenkel JW, van der Zwan A, Gosselaar PH, van Rijen PC, de Boer-Bergsma JJ, Deelen P, Swertz MA, De Muynck L, Van Damme P, Veldink JH, et al. RNA-Sequencing Highlights Inflammation and Impaired Integrity of the Vascular Wall in Brain Arteriovenous Malformations. Stroke. 51: 268-274. PMID 31795902 DOI: 10.1161/Strokeaha.119.025657 |
0.607 |
|
| 2019 |
Clark DW, Okada Y, Moore KHS, Mason D, Pirastu N, Gandin I, Mattsson H, Barnes CLK, Lin K, Zhao JH, Deelen P, Rohde R, Schurmann C, Guo X, Giulianini F, et al. Associations of autozygosity with a broad range of human phenotypes. Nature Communications. 10: 4957. PMID 31673082 DOI: 10.1038/S41467-019-12283-6 |
0.788 |
|
| 2019 |
Ricaño-Ponce I, Gutierrez-Achury J, Costa AF, Deelen P, Kurilshikov A, Zorro MM, Platteel M, van der Graaf A, Sanna S, Daffra O, Zhernakova A, Fu J, Trynka G, Smecuol E, et al. Immunochip meta-analysis in European and Argentinian populations identifies two novel genetic loci associated with celiac disease. European Journal of Human Genetics : Ejhg. PMID 31591516 DOI: 10.1038/S41431-019-0520-4 |
0.677 |
|
| 2019 |
Deelen P, van Dam S, Herkert JC, Karjalainen JM, Brugge H, Abbott KM, van Diemen CC, van der Zwaag PA, Gerkes EH, Zonneveld-Huijssoon E, Boer-Bergsma JJ, Folkertsma P, Gillett T, van der Velde KJ, Kanninga R, et al. Improving the diagnostic yield of exome- sequencing by predicting gene-phenotype associations using large-scale gene expression analysis. Nature Communications. 10: 2837. PMID 31253775 DOI: 10.1038/S41467-019-10649-4 |
0.763 |
|
| 2019 |
Timmers PR, Mounier N, Lall K, Fischer K, Ning Z, Feng X, Bretherick AD, Clark DW, Agbessi M, Ahsan H, Alves I, Andiappan A, Awadalla P, Battle A, ... ... Deelen P, ... ... Deelen P, et al. Genomics of 1 million parent lifespans implicates novel pathways and common diseases and distinguishes survival chances. Elife. 8. PMID 30642433 DOI: 10.7554/Elife.39856 |
0.333 |
|
| 2018 |
Iotchkova V, Huang J, Morris JA, Jain D, Barbieri C, Walter K, Min JL, Chen L, Astle W, Cocca M, Deelen P, Elding H, Farmaki AE, Franklin CS, Franberg M, et al. Author Correction: Discovery and refinement of genetic loci associated with cardiometabolic risk using dense imputation maps. Nature Genetics. PMID 30390057 DOI: 10.1038/S41588-018-0276-8 |
0.739 |
|
| 2018 |
Zhernakova DV, Le TH, Kurilshikov A, Atanasovska B, Bonder MJ, Sanna S, Claringbould A, Võsa U, Deelen P, Franke L, de Boer RA, Kuipers F, Netea MG, Hofker MH, Wijmenga C, et al. Author Correction: Individual variations in cardiovascular-disease-related protein levels are driven by genetics and gut microbiome. Nature Genetics. PMID 30341443 DOI: 10.1038/S41588-018-0275-9 |
0.712 |
|
| 2018 |
Zhernakova DV, Le TH, Kurilshikov A, Atanasovska B, Bonder MJ, Sanna S, Claringbould A, Võsa U, Deelen P, Franke L, de Boer RA, Kuipers F, Netea MG, et al. Individual variations in cardiovascular-disease-related protein levels are driven by genetics and gut microbiome. Nature Genetics. PMID 30250126 DOI: 10.1038/S41588-018-0224-7 |
0.767 |
|
| 2018 |
van der Wijst MGP, Brugge H, de Vries DH, Deelen P, Swertz MA, Franke L. Single-cell RNA sequencing identifies celltype-specific cis-eQTLs and co-expression QTLs. Nature Genetics. 50: 493-497. PMID 29610479 DOI: 10.1038/S41588-018-0089-9 |
0.782 |
|
| 2018 |
Timmers PR, Mounier N, Lall K, Fischer K, Ning Z, Feng X, Bretherick AD, Clark DW, Agbessi M, Ahsan H, Alves I, Andiappan A, Awadalla P, Battle A, Bonder M, ... ... Deelen P, et al. Author response: Genomics of 1 million parent lifespans implicates novel pathways and common diseases and distinguishes survival chances Elife. DOI: 10.7554/Elife.39856.048 |
0.649 |
|
| 2017 |
Stolle S, Ciapaite J, Reijne AC, Talarovicova A, Wolters JC, Aguirre-Gamboa R, van der Vlies P, de Lange K, Neerincx PB, van der Vries G, Deelen P, Swertz MA, Li Y, Bischoff R, Permentier HP, et al. Running-wheel activity delays mitochondrial respiratory flux decline in aging mouse muscle via a post-transcriptional mechanism. Aging Cell. PMID 29120091 DOI: 10.1111/Acel.12700 |
0.521 |
|
| 2017 |
Macé A, Tuke MA, Deelen P, Kristiansson K, Mattsson H, Nõukas M, Sapkota Y, Schick U, Porcu E, Rüeger S, McDaid AF, Porteous D, Winkler TW, Salvi E, Shrine N, et al. CNV-association meta-analysis in 191,161 European adults reveals new loci associated with anthropometric traits. Nature Communications. 8: 744. PMID 28963451 DOI: 10.1038/S41467-017-00556-X |
0.755 |
|
| 2016 |
Graham DB, Lefkovith A, Deelen P, de Klein N, Varma M, Boroughs A, Desch AN, Ng AC, Guzman G, Schenone M, Petersen CP, Bhan AK, Rivas MA, Daly MJ, Carr SA, et al. TMEM258 Is a Component of the Oligosaccharyltransferase Complex Controlling ER Stress and Intestinal Inflammation. Cell Reports. 17: 2955-2965. PMID 27974209 DOI: 10.1016/J.Celrep.2016.11.042 |
0.617 |
|
| 2016 |
Bonder MJ, Luijk R, Zhernakova DV, Moed M, Deelen P, Vermaat M, van Iterson M, van Dijk F, van Galen M, Bot J, Slieker RC, Jhamai PM, Verbiest M, Suchiman HE, Verkerk M, et al. Disease variants alter transcription factor levels and methylation of their binding sites. Nature Genetics. PMID 27918535 DOI: 10.1038/Ng.3721 |
0.807 |
|
| 2016 |
Zhernakova DV, Deelen P, Vermaat M, van Iterson M, van Galen M, Arindrarto W, van 't Hof P, Mei H, van Dijk F, Westra HJ, Bonder MJ, van Rooij J, Verkerk M, Jhamai PM, Moed M, et al. Identification of context-dependent expression quantitative trait loci in whole blood. Nature Genetics. PMID 27918533 DOI: 10.1038/Ng.3737 |
0.825 |
|
| 2016 |
Oosting M, Kerstholt M, Ter Horst R, Li Y, Deelen P, Smeekens S, Jaeger M, Lachmandas E, Vrijmoeth H, Lupse M, Flonta M, Cramer RA, Kullberg BJ, Kumar V, Xavier R, et al. Functional and Genomic Architecture of Borrelia burgdorferi-Induced Cytokine Responses in Humans. Cell Host & Microbe. PMID 27818078 DOI: 10.1016/J.Chom.2016.10.006 |
0.628 |
|
| 2016 |
Li Y, Oosting M, Smeekens SP, Jaeger M, Aguirre-Gamboa R, Le KT, Deelen P, Ricaño-Ponce I, Schoffelen T, Jansen AF, Swertz MA, Withoff S, van de Vosse E, van Deuren M, van de Veerdonk F, et al. A Functional Genomics Approach to Understand Variation in Cytokine Production in Humans. Cell. 167: 1099-1110.e14. PMID 27814507 DOI: 10.1016/J.Cell.2016.10.017 |
0.81 |
|
| 2016 |
Li Y, Oosting M, Deelen P, Ricaño-Ponce I, Smeekens S, Jaeger M, Matzaraki V, Swertz MA, Xavier RJ, Franke L, Wijmenga C, Joosten LA, Kumar V, Netea MG. Corrigendum: Inter-individual variability and genetic influences on cytokine responses to bacteria and fungi. Nature Medicine. 22: 1192. PMID 27711068 DOI: 10.1038/Nm1016-1192B |
0.772 |
|
| 2016 |
Hehir-Kwa JY, Marschall T, Kloosterman WP, Francioli LC, Baaijens JA, Dijkstra LJ, Abdellaoui A, Koval V, Thung DT, Wardenaar R, Renkens I, Coe BP, Deelen P, de Ligt J, Lameijer EW, et al. A high-quality human reference panel reveals the complexity and distribution of genomic structural variants. Nature Communications. 7: 12989. PMID 27708267 DOI: 10.1038/Ncomms12989 |
0.758 |
|
| 2016 |
Bonder MJ, Kurilshikov A, Tigchelaar EF, Mujagic Z, Imhann F, Vila AV, Deelen P, Vatanen T, Schirmer M, Smeekens SP, Zhernakova DV, Jankipersadsing SA, Jaeger M, Oosting M, Cenit MC, et al. The effect of host genetics on the gut microbiome. Nature Genetics. PMID 27694959 DOI: 10.1038/Ng.3663 |
0.814 |
|
| 2016 |
Iotchkova V, Huang J, Morris JA, Jain D, Barbieri C, Walter K, Min JL, Chen L, Astle W, Cocca M, Deelen P, Elding H, Farmaki AE, Franklin CS, Franberg M, et al. Discovery and refinement of genetic loci associated with cardiometabolic risk using dense imputation maps. Nature Genetics. PMID 27668658 DOI: 10.1038/Ng.3668 |
0.798 |
|
| 2016 |
Slieker RC, van Iterson M, Luijk R, Beekman M, Zhernakova DV, Moed MH, Mei H, van Galen M, Deelen P, Bonder MJ, Zhernakova A, Uitterlinden AG, Tigchelaar EF, Stehouwer CD, Schalkwijk CG, et al. Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms. Genome Biology. 17: 191. PMID 27654999 DOI: 10.1186/S13059-016-1053-6 |
0.738 |
|
| 2016 |
Visschedijk MC, Alberts R, Mucha S, Deelen P, de Jong DJ, Pierik M, Spekhorst LM, Imhann F, van der Meulen-de Jong AE, van der Woude CJ, van Bodegraven AA, Oldenburg B, Löwenberg M, Dijkstra G, Ellinghaus D, et al. Pooled Resequencing of 122 Ulcerative Colitis Genes in a Large Dutch Cohort Suggests Population-Specific Associations of Rare Variants in MUC2. Plos One. 11: e0159609. PMID 27490946 DOI: 10.1371/Journal.Pone.0159609 |
0.694 |
|
| 2016 |
Jankipersadsing SA, Hadizadeh F, Bonder MJ, Tigchelaar EF, Deelen P, Fu J, Andreasson A, Agreus L, Walter S, Wijmenga C, Hysi P, D'Amato M, Zhernakova A. A GWAS meta-analysis suggests roles for xenobiotic metabolism and ion channel activity in the biology of stool frequency. Gut. PMID 27473416 DOI: 10.1136/Gutjnl-2016-312398 |
0.625 |
|
| 2016 |
Li Y, Oosting M, Deelen P, Ricaño-Ponce I, Smeekens S, Jaeger M, Matzaraki V, Swertz MA, Xavier RJ, Franke L, Wijmenga C, Joosten LA, Kumar V, Netea MG. Inter-individual variability and genetic influences on cytokine responses to bacteria and fungi. Nature Medicine. PMID 27376574 DOI: 10.1038/Nm.4139 |
0.802 |
|
| 2016 |
Zhernakova A, Kurilshikov A, Bonder MJ, Tigchelaar EF, Schirmer M, Vatanen T, Mujagic Z, Vila AV, Falony G, Vieira-Silva S, Wang J, Imhann F, Brandsma E, Jankipersadsing SA, Joossens M, ... ... Deelen P, et al. Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity. Science (New York, N.Y.). 352: 565-9. PMID 27126040 DOI: 10.1126/Science.Aad3369 |
0.772 |
|
| 2016 |
Kleinloog R, Verweij BH, van der Vlies P, Deelen P, Swertz MA, de Muynck L, Van Damme P, Giuliani F, Regli L, van der Zwan A, Berkelbach van der Sprenkel JW, Han KS, Gosselaar P, van Rijen PC, Korkmaz E, et al. RNA Sequencing Analysis of Intracranial Aneurysm Walls Reveals Involvement of Lysosomes and Immunoglobulins in Rupture. Stroke; a Journal of Cerebral Circulation. PMID 27026628 DOI: 10.1161/Strokeaha.116.012541 |
0.536 |
|
| 2016 |
Ricaño-Ponce I, Zhernakova DV, Deelen P, Luo O, Li X, Isaacs A, Karjalainen J, Di Tommaso J, Borek ZA, Zorro MM, Gutierrez-Achury J, Uitterlinden AG, Hofman A, van Meurs J, et al. Refined mapping of autoimmune disease associated genetic variants with gene expression suggests an important role for non-coding RNAs. Journal of Autoimmunity. PMID 26898941 DOI: 10.1016/J.Jaut.2016.01.002 |
0.776 |
|
| 2016 |
Visschedijk MC, Alberts R, Mucha S, Deelen P, De Jong DJ, Pierik M, Van Der Meulen A, Van Der Woude CJ, Van bodegraven A, Oldenburg B, Löwenberg M, Dijkstra G, Ellinghaus D, Schreiber S, Wijmenga C, et al. Su1854 Pooled Resequencing of 122 Ulcerative Colitis Genes in a Large Dutch Population Suggests Population-Specific Association of Rare Variants in MUC2 Gastroenterology. 150: S570-S571. DOI: 10.1016/S0016-5085(16)31953-9 |
0.611 |
|
| 2015 |
Tigchelaar EF, Zhernakova A, Dekens JA, Hermes G, Baranska A, Mujagic Z, Swertz MA, Muñoz AM, Deelen P, Cénit MC, Franke L, Scholtens S, Stolk RP, Wijmenga C, Feskens EJ. Cohort profile: LifeLines DEEP, a prospective, general population cohort study in the northern Netherlands: study design and baseline characteristics. Bmj Open. 5: e006772. PMID 26319774 DOI: 10.1136/Bmjopen-2014-006772 |
0.773 |
|
| 2015 |
Kanterakis A, Deelen P, van Dijk F, Byelas H, Dijkstra M, Swertz MA. Molgenis-impute: imputation pipeline in a box. Bmc Research Notes. 8: 359. PMID 26286716 DOI: 10.1186/S13104-015-1309-3 |
0.609 |
|
| 2015 |
van Leeuwen EM, Kanterakis A, Deelen P, Kattenberg MV, Slagboom PE, de Bakker PI, Wijmenga C, Swertz MA, Boomsma DI, van Duijn CM, Karssen LC, Hottenga JJ. Population-specific genotype imputations using minimac or IMPUTE2. Nature Protocols. 10: 1285-96. PMID 26226460 DOI: 10.1038/Nprot.2015.077 |
0.758 |
|
| 2015 |
Deelen P, Zhernakova DV, de Haan M, van der Sijde M, Bonder MJ, Karjalainen J, van der Velde KJ, Abbott KM, Fu J, Wijmenga C, Sinke RJ, Swertz MA, Franke L. Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels. Genome Medicine. 7: 30. PMID 25954321 DOI: 10.1186/S13073-015-0152-4 |
0.786 |
|
| 2015 |
Farlow JL, Lin H, Sauerbeck L, Lai D, Koller DL, Pugh E, Hetrick K, Ling H, Kleinloog R, van der Vlies P, Deelen P, Swertz MA, Verweij BH, Regli L, Rinkel GJ, et al. Lessons learned from whole exome sequencing in multiplex families affected by a complex genetic disorder, intracranial aneurysm. Plos One. 10: e0121104. PMID 25803036 DOI: 10.1371/Journal.Pone.0121104 |
0.634 |
|
| 2015 |
van Leeuwen EM, Karssen LC, Deelen J, Isaacs A, Medina-Gomez C, Mbarek H, Kanterakis A, Trompet S, Postmus I, Verweij N, van Enckevort DJ, Huffman JE, White CC, Feitosa MF, Bartz TM, ... ... Deelen P, et al. Genome of The Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels. Nature Communications. 6: 6065. PMID 25751400 DOI: 10.1038/Ncomms7065 |
0.734 |
|
| 2014 |
Deelen P, Bonder MJ, van der Velde KJ, Westra HJ, Winder E, Hendriksen D, Franke L, Swertz MA. Genotype harmonizer: automatic strand alignment and format conversion for genotype data integration. Bmc Research Notes. 7: 901. PMID 25495213 DOI: 10.1186/1756-0500-7-901 |
0.797 |
|
| 2014 |
Bonder MJ, Kasela S, Kals M, Tamm R, Lokk K, Barragan I, Buurman WA, Deelen P, Greve JW, Ivanov M, Rensen SS, van Vliet-Ostaptchouk JV, Wolfs MG, Fu J, Hofker MH, et al. Genetic and epigenetic regulation of gene expression in fetal and adult human livers. Bmc Genomics. 15: 860. PMID 25282492 DOI: 10.1186/1471-2164-15-860 |
0.747 |
|
| 2014 |
Francioli LC, Menelaou A, Pulit SL, Van Dijk F, Palamara PF, Elbers CC, Neerincx PBT, Ye K, Guryev V, Kloosterman WP, Deelen P, Abdellaoui A, Van Leeuwen EM, Van Oven M, Vermaat M, et al. Whole-genome sequence variation, population structure and demographic history of the Dutch population Nature Genetics. 46: 818-825. PMID 24974849 DOI: 10.1038/Ng.3021 |
0.441 |
|
| 2014 |
Deelen P, Menelaou A, van Leeuwen EM, Kanterakis A, van Dijk F, Medina-Gomez C, Francioli LC, Hottenga JJ, Karssen LC, Estrada K, Kreiner-Møller E, Rivadeneira F, van Setten J, Gutierrez-Achury J, Westra HJ, et al. Improved imputation quality of low-frequency and rare variants in European samples using the 'Genome of The Netherlands'. European Journal of Human Genetics : Ejhg. 22: 1321-6. PMID 24896149 DOI: 10.1038/Ejhg.2014.19 |
0.801 |
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| 2014 |
Almeida R, Ricaño-Ponce I, Kumar V, Deelen P, Szperl A, Trynka G, Gutierrez-Achury J, Kanterakis A, Westra HJ, Franke L, Swertz MA, Platteel M, Bilbao JR, Barisani D, Greco L, et al. Fine mapping of the celiac disease-associated LPP locus reveals a potential functional variant. Human Molecular Genetics. 23: 2481-9. PMID 24334606 DOI: 10.1093/Hmg/Ddt619 |
0.811 |
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| 2014 |
Boomsma DI, Wijmenga C, Slagboom EP, Swertz MA, Karssen LC, Abdellaoui A, Ye K, Guryev V, Vermaat M, Van Dijk F, Francioli LC, Hottenga JJ, Laros JFJ, Li Q, Li Y, ... ... Deelen P, et al. The Genome of the Netherlands: Design, and project goals European Journal of Human Genetics. 22: 221-227. PMID 23714750 DOI: 10.1038/Ejhg.2013.118 |
0.727 |
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| 2014 |
Deelen P, Menelaou A, Van Leeuwen EM, Kanterakis A, Van Dijk F, Medina-Gomez C, Francioli LC, Hottenga JJ, Karssen LC, Estrada K, Kreiner-Møller E, Rivadeneira F, Van Setten J, Gutierrez-Achury J, Westra HJ, et al. Improved imputation quality of low-frequency and rare variants in European samples using the 'Genome of the Netherlands' European Journal of Human Genetics. 22: 1321-1326. DOI: 10.1038/ejhg.2014.19 |
0.672 |
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| 2012 |
Fu J, Wolfs MG, Deelen P, Westra HJ, Fehrmann RS, Te Meerman GJ, Buurman WA, Rensen SS, Groen HJ, Weersma RK, van den Berg LH, Veldink J, Ophoff RA, Snieder H, van Heel D, et al. Unraveling the regulatory mechanisms underlying tissue-dependent genetic variation of gene expression. Plos Genetics. 8: e1002431. PMID 22275870 DOI: 10.1371/Journal.Pgen.1002431 |
0.811 |
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| 2011 |
Fehrmann RS, Jansen RC, Veldink JH, Westra HJ, Arends D, Bonder MJ, Fu J, Deelen P, Groen HJ, Smolonska A, Weersma RK, Hofstra RM, Buurman WA, Rensen S, Wolfs MG, et al. Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLA. Plos Genetics. 7: e1002197. PMID 21829388 DOI: 10.1371/Journal.Pgen.1002197 |
0.83 |
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| 2011 |
Szperl A, Ricaño-Ponce I, Li J, Deelen P, Kanterakis A, Plagnol V, van Dijk F, Westra H, Trynka G, Mulder C, Swertz M, Wijmenga C, Zheng HC. Exome sequencing in a family segregating for celiac disease Clinical Genetics. 80: 138-147. PMID 21627641 DOI: 10.1111/J.1399-0004.2011.01714.X |
0.786 |
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