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Abigail L. Lind - Publications

Affiliations: 
2013-2017 Department of Biomedical Informatics Vanderbilt University, Nashville, TN 
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Lind AL, McDonald NA, Gerrick ER, Bhatt AS, Pollard KS. Hybrid assemblies of microbiome protists reveal evolutionary diversification reflecting host ecology. Biorxiv : the Preprint Server For Biology. PMID 38045412 DOI: 10.1101/2023.11.20.567959  0.431
2023 Christmas MJ, Kaplow IM, Genereux DP, Dong MX, Hughes GM, Li X, Sullivan PF, Hindle AG, Andrews G, Armstrong JC, Bianchi M, Breit AM, Diekhans M, Fanter C, Foley NM, ... ... Lind AL, ... ... Lind A, et al. Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.). 380: eabn3943. PMID 37104599 DOI: 10.1126/science.abn3943  0.361
2021 Kwon MJ, Steiniger C, Cairns TC, Wisecaver JH, Lind AL, Pohl C, Regner C, Rokas A, Meyer V. Beyond the Biosynthetic Gene Cluster Paradigm: Genome-Wide Coexpression Networks Connect Clustered and Unclustered Transcription Factors to Secondary Metabolic Pathways. Microbiology Spectrum. e0089821. PMID 34523946 DOI: 10.1128/Spectrum.00898-21  0.72
2020 Steenwyk JL, Lind AL, Ries LNA, Dos Reis TF, Silva LP, Almeida F, Bastos RW, Fraga da Silva TFC, Bonato VLD, Pessoni AM, Rodrigues F, Raja HA, Knowles SL, Oberlies NH, Lagrou K, et al. Pathogenic Allodiploid Hybrids of Aspergillus Fungi. Current Biology : Cb. PMID 32502407 DOI: 10.1016/J.Cub.2020.04.071  0.692
2020 Bastos RW, Valero C, Silva LP, Schoen T, Drott M, Brauer V, Silva-Rocha R, Lind A, Steenwyk JL, Rokas A, Rodrigues F, Resendiz-Sharpe A, Lagrou K, Marcet-Houben M, Gabaldón T, et al. Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans. Msphere. 5. PMID 32269156 DOI: 10.1128/mSphere.00153-20  0.654
2019 Dos Reis TF, Silva LP, de Castro PA, do Carmo RA, Marini MM, da Silveira JF, Ferreira BH, Rodrigues F, Lind AL, Rokas A, Goldman GH. The Aspergillus fumigatus Mismatch Repair Homolog Is Important for Virulence and Azole Resistance. Msphere. 4. PMID 31391280 DOI: 10.1128/mSphere.00416-19  0.494
2019 Lind AL, Lai YYY, Mostovoy Y, Holloway AK, Iannucci A, Mak ACY, Fondi M, Orlandini V, Eckalbar WL, Milan M, Rovatsos M, Kichigin IG, Makunin AI, Johnson Pokorná M, Altmanová M, et al. Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards. Nature Ecology & Evolution. 3: 1241-1252. PMID 31358948 DOI: 10.1038/S41559-019-0945-8  0.483
2019 Steenwyk JL, Shen XX, Lind AL, Goldman GH, Rokas A. A Robust Phylogenomic Time Tree for Biotechnologically and Medically Important Fungi in the Genera and . Mbio. 10. PMID 31289177 DOI: 10.1128/Mbio.00925-19  0.691
2018 Rokas A, Wisecaver JH, Lind AL. The birth, evolution and death of metabolic gene clusters in fungi. Nature Reviews. Microbiology. PMID 30194403 DOI: 10.1038/S41579-018-0075-3  0.733
2018 Lind AL, Lim FY, Soukup AA, Keller NP, Rokas A. An LaeA- and BrlA-Dependent Cellular Network Governs Tissue-Specific Secondary Metabolism in the Human Pathogen. Msphere. 3. PMID 29564395 DOI: 10.1128/mSphere.00050-18  0.58
2017 Lind AL, Wisecaver JH, Lameiras C, Wiemann P, Palmer JM, Keller NP, Rodrigues F, Goldman GH, Rokas A. Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species. Plos Biology. 15: e2003583. PMID 29149178 DOI: 10.1371/Journal.Pbio.2003583  0.723
2017 Lawson SP, Sigle L, Lind A, Legan AW, Mezzanotte JN, Honegger HW, Abbot P. An alternative pathway to eusociality: Exploring the molecular and functional basis of fortress defense. Evolution; International Journal of Organic Evolution. PMID 28608545 DOI: 10.1111/Evo.13285  0.334
2016 Lind AL, Smith TD, Saterlee T, Calvo AM, Rokas A. Regulation of Secondary Metabolism by the Velvet Complex is Temperature-Responsive in Aspergillus. G3 (Bethesda, Md.). PMID 27694115 DOI: 10.1534/G3.116.033084  0.593
2015 Lind AL, Wisecaver JH, Smith TD, Feng X, Calvo AM, Rokas A. Examining the evolution of the regulatory circuit controlling secondary metabolism and development in the fungal genus Aspergillus. Plos Genetics. 11: e1005096. PMID 25786130 DOI: 10.1371/Journal.Pgen.1005096  0.724
2014 Baltrus DA, Yourstone S, Lind A, Guilbaud C, Sands DC, Jones CD, Morris CE, Dangl JL. Draft Genome Sequences of a Phylogenetically Diverse Suite of Pseudomonas syringae Strains from Multiple Source Populations. Genome Announcements. 2. PMID 24459267 DOI: 10.1128/Genomea.01195-13  0.408
2014 Mucyn TS, Yourstone S, Lind AL, Biswas S, Nishimura MT, Baltrus DA, Cumbie JS, Chang JH, Jones CD, Dangl JL, Grant SR. Variable suites of non-effector genes are co-regulated in the type III secretion virulence regulon across the Pseudomonas syringae phylogeny. Plos Pathogens. 10: e1003807. PMID 24391493 DOI: 10.1371/Journal.Ppat.1003807  0.551
2013 Dhingra S, Lind AL, Lin HC, Tang Y, Rokas A, Calvo AM. The fumagillin gene cluster, an example of hundreds of genes under veA control in Aspergillus fumigatus. Plos One. 8: e77147. PMID 24116213 DOI: 10.1371/Journal.Pone.0077147  0.646
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