Rahul Tyagi - Publications

Affiliations: 
Washington University, Saint Louis, St. Louis, MO 
Area:
bioinformatics; genomics; parasite; nematodes

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Tyagi R, Bulman CA, Cho-Ngwa F, Fischer C, Marcellino C, Arkin MR, McKerrow JH, McNamara CW, Mahoney M, Tricoche N, Jawahar S, Janetka JW, Lustigman S, Sakanari J, Mitreva M. An Integrated Approach to Identify New Anti-Filarial Leads to Treat River Blindness, a Neglected Tropical Disease. Pathogens (Basel, Switzerland). 10. PMID 33466870 DOI: 10.3390/pathogens10010071  0.63
2020 Jasmer DP, Rosa BA, Tyagi R, Mitreva M. Rapid determination of nematode cell and organ susceptibility to toxic treatments. International Journal For Parasitology. Drugs and Drug Resistance. 14: 167-182. PMID 33125935 DOI: 10.1016/j.ijpddr.2020.10.007  0.629
2020 Jasmer DP, Rosa BA, Tyagi R, Bulman CA, Beerntsen B, Urban JF, Sakanari J, Mitreva M. De novo identification of toxicants that cause irreparable damage to parasitic nematode intestinal cells. Plos Neglected Tropical Diseases. 14: e0007942. PMID 32453724 DOI: 10.1371/Journal.Pntd.0007942  0.697
2019 Jasmer DP, Rosa BA, Tyagi R, Mitreva M. Omics Driven Understanding of the Intestines of Parasitic Nematodes. Frontiers in Genetics. 10: 652. PMID 31402928 DOI: 10.3389/Fgene.2019.00652  0.681
2019 Schwimmer JB, Johnson JS, Angeles JE, Behling C, Belt PH, Borecki I, Bross C, Durelle J, Goyal NP, Hamilton G, Holtz ML, Lavine JE, Mitreva M, Newton KP, Pan A, ... ... Tyagi R, et al. Microbiome Signatures Associated with Steatohepatitis and Moderate to Severe Fibrosis in Children With Nonalcoholic Fatty Liver Disease. Gastroenterology. PMID 31255652 DOI: 10.1053/J.Gastro.2019.06.028  0.617
2019 Tyagi R, Elfawal MA, Wildman SA, Helander J, Bulman CA, Sakanari J, Rosa BA, Brindley PJ, Janetka JW, Aroian RV, Mitreva M. Identification of small molecule enzyme inhibitors as broad-spectrum anthelmintics. Scientific Reports. 9: 9085. PMID 31235822 DOI: 10.1038/S41598-019-45548-7  0.677
2019 Coghlan A, Tyagi R, Cotton JA, Holroyd N, Rosa BA, Tsai IJ, Laetsch DR, Beech RN, Day TA, Hallsworth-Pepin K, Ke H, Kuo T, Lee TJ, Martin J, Maizels RM, et al. Comparative genomics of the major parasitic worms Nature Genetics. 51: 163-174. PMID 30397333 DOI: 10.1038/S41588-018-0262-1  0.703
2018 Zarlenga DS, Mitreva M, Thompson P, Tyagi R, Tuo W, Hoberg EP. A tale of three kingdoms: members of the Phylum Nematoda independently acquired the detoxifying enzyme cyanase through horizontal gene transfer from plants and bacteria. Parasitology. 1-8. PMID 30301483 DOI: 10.1017/S0031182018001701  0.648
2018 Martin J, Tyagi R, Rosa BA, Mitreva M. A Multi-Omics Database for Parasitic Nematodes and Trematodes. Methods in Molecular Biology (Clifton, N.J.). 1757: 371-397. PMID 29761465 DOI: 10.1007/978-1-4939-7737-6_13  0.694
2018 Tyagi R, Maddirala AR, Elfawal M, Fischer C, Bulman C, Rosa BA, Gao X, Chugani R, Zhou M, Helander J, Brindley P, Tseng CC, Greig IR, Sakanari J, Wildman SA, et al. Small molecule inhibitors of metabolic enzymes repurposed as a new class of anthelmintics. Acs Infectious Diseases. PMID 29718656 DOI: 10.1021/Acsinfecdis.8B00090  0.668
2018 Rosa BA, Supali T, Gankpala L, Djuardi Y, Sartono E, Zhou Y, Fischer K, Martin J, Tyagi R, Bolay FK, Fischer PU, Yazdanbakhsh M, Mitreva M. Differential human gut microbiome assemblages during soil-transmitted helminth infections in Indonesia and Liberia. Microbiome. 6: 33. PMID 29486796 DOI: 10.1186/S40168-018-0416-5  0.625
2018 Palevich N, Britton C, Kamenetzky L, Mitreva M, de Moraes Mourão M, Bennuru S, Quack T, Scholte LLS, Tyagi R, Slatko BE. Tackling Hypotheticals in Helminth Genomes. Trends in Parasitology. 34: 179-183. PMID 29249363 DOI: 10.1016/J.Pt.2017.11.007  0.644
2018 Tyagi R, Seshadri S, Parkinson J, Mitreva M. Comparative analysis of metabolism in parasitic worms Protocol Exchange. DOI: 10.1038/Protex.2018.048  0.662
2018 Tyagi R, Seshadri S, Mitreva M, Parkinson J. Annotating metabolic enzymes in parasitic worm proteomes Protocol Exchange. DOI: 10.1038/Protex.2018.047  0.665
2018 Tyagi R, Martin J, Mitreva M. Kinase annotation for helminths Protocol Exchange. DOI: 10.1038/Protex.2018.042  0.599
2017 Norice-Tra CT, Ribeiro J, Bennuru S, Fay MP, Tyagi R, Mitreva M, Nutman TB. Insights Into Onchocerca volvulus Population Biology Through Multilocus Immunophenotyping. The Journal of Infectious Diseases. 216: 736-743. PMID 28934436 DOI: 10.1093/Infdis/Jix394  0.626
2017 McNulty SN, Tort JF, Rinaldi G, Fischer K, Rosa BA, Smircich P, Fontenla S, Choi YJ, Tyagi R, Hallsworth-Pepin K, Mann VH, Kammili L, Latham PS, Dell'Oca N, Dominguez F, et al. Genomes of Fasciola hepatica from the Americas Reveal Colonization with Neorickettsia Endobacteria Related to the Agents of Potomac Horse and Human Sennetsu Fevers. Plos Genetics. 13: e1006537. PMID 28060841 DOI: 10.1371/Journal.Pgen.1006537  0.684
2016 Choi YJ, Tyagi R, McNulty SN, Rosa BA, Ozersky P, Martin J, Hallsworth-Pepin K, Unnasch TR, Norice CT, Nutman TB, Weil GJ, Fischer PU, Mitreva M. Genomic diversity in Onchocerca volvulus and its Wolbachia endosymbiont. Nature Microbiology. 2: 16207. PMID 27869792 DOI: 10.1038/Nmicrobiol.2016.207  0.644
2016 Li BW, McNulty SN, Rosa BA, Tyagi R, Zeng QR, Gu KZ, Weil GJ, Mitreva M. Conservation and diversification of the transcriptomes of adult Paragonimus westermani and P. skrjabini. Parasites & Vectors. 9: 497. PMID 27619014 DOI: 10.1186/S13071-016-1785-X  0.639
2016 Gao X, Tyagi R, Magrini V, Ly A, Jasmer DP, Mitreva M. Compartmentalization of functions and predicted miRNA regulation among contiguous regions of the Nematode Intestine. Rna Biology. 0. PMID 27002534 DOI: 10.1080/15476286.2016.1166333  0.632
2016 McNulty SN, Strübe C, Rosa BA, Martin JC, Tyagi R, Choi YJ, Wang Q, Hallsworth Pepin K, Zhang X, Ozersky P, Wilson RK, Sternberg PW, Gasser RB, Mitreva M. Dictyocaulus viviparus genome, variome and transcriptome elucidate lungworm biology and support future intervention. Scientific Reports. 6: 20316. PMID 26856411 DOI: 10.1038/Srep20316  0.703
2016 Schwimmer JB, Newton KP, Africa J, Durelle J, Arroyo S, Bross C, Behling C, Hamilton G, Sirlin CB, Borecki I, Mitreva M, Tyagi R, Belt P, Yates KP, Lavine JE, et al. 1097 The Intestinal Microbiome in Children With Nonalcoholic Fatty Liver Disease–A Case-Control Study Gastroenterology. 150: S219. DOI: 10.1016/S0016-5085(16)30812-5  0.613
2015 Tyagi R, Joachim A, Ruttkowski B, Rosa BA, Martin JC, Hallsworth-Pepin K, Zhang X, Ozersky P, Wilson RK, Ranganathan S, Sternberg PW, Gasser RB, Mitreva M. Cracking the nodule worm code advances knowledge of parasite biology and biotechnology to tackle major diseases of livestock. Biotechnology Advances. 33: 980-91. PMID 26026709 DOI: 10.1016/J.Biotechadv.2015.05.004  0.69
2015 Tyagi R, Rosa BA, Lewis WG, Mitreva M. Pan-phylum Comparison of Nematode Metabolic Potential. Plos Neglected Tropical Diseases. 9: e0003788. PMID 26000881 DOI: 10.1371/Journal.Pntd.0003788  0.695
2015 Martin J, Rosa BA, Ozersky P, Hallsworth-Pepin K, Zhang X, Bhonagiri-Palsikar V, Tyagi R, Wang Q, Choi YJ, Gao X, McNulty SN, Brindley PJ, Mitreva M. Helminth.net: expansions to Nematode.net and an introduction to Trematode.net. Nucleic Acids Research. 43: D698-706. PMID 25392426 DOI: 10.1093/Nar/Gku1128  0.673
2015 Tyagi R, Rosa BA, Lewis WG, Mitreva M. Pan-phylum Comparison of Nematode Metabolic Potential Plos Neglected Tropical Diseases. 9. DOI: 10.1371/journal.pntd.0003788  0.614
2014 Tang YT, Gao X, Rosa BA, Abubucker S, Hallsworth-Pepin K, Martin J, Tyagi R, Heizer E, Zhang X, Bhonagiri-Palsikar V, Minx P, Warren WC, Wang Q, Zhan B, Hotez PJ, et al. Genome of the human hookworm Necator americanus. Nature Genetics. 46: 261-269. PMID 24441737 DOI: 10.1038/ng.2875  0.694
2007 Tyagi R, Mathews DH. Predicting helical coaxial stacking in RNA multibranch loops. Rna (New York, N.Y.). 13: 939-51. PMID 17507661 DOI: 10.1261/Rna.305307  0.485
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