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Jean-Benoît Lalanne - Publications

Affiliations: 
Department of Biology Massachusetts Institute of Technology, Cambridge, MA, United States 
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chen W, Choi J, Li X, Nathans JF, Martin B, Yang W, Hamazaki N, Qiu C, Lalanne JB, Regalado S, Kim H, Agarwal V, Nichols E, Leith A, Lee C, et al. Symbolic recording of signalling and cis-regulatory element activity to DNA. Nature. PMID 39020177 DOI: 10.1038/s41586-024-07706-4  0.495
2024 Lalanne JB, Regalado SG, Domcke S, Calderon D, Martin BK, Li X, Li T, Suiter CC, Lee C, Trapnell C, Shendure J. Multiplex profiling of developmental cis-regulatory elements with quantitative single-cell expression reporters. Nature Methods. PMID 38724692 DOI: 10.1038/s41592-024-02260-3  0.521
2024 Li X, Chen W, Martin BK, Calderon D, Lee C, Choi J, Chardon FM, McDiarmid TA, Daza RM, Kim H, Lalanne JB, Nathans JF, Lee DS, Shendure J. Chromatin context-dependent regulation and epigenetic manipulation of prime editing. Cell. PMID 38608704 DOI: 10.1016/j.cell.2024.03.020  0.489
2024 Pinglay S, Lalanne JB, Daza RM, Koeppel J, Li X, Lee DS, Shendure J. Multiplex generation and single cell analysis of structural variants in a mammalian genome. Biorxiv : the Preprint Server For Biology. PMID 38405830 DOI: 10.1101/2024.01.22.576756  0.507
2023 Li X, Chen W, Martin BK, Calderon D, Lee C, Choi J, Chardon FM, McDiarmid T, Kim H, Lalanne JB, Nathans JF, Shendure J. Chromatin context-dependent regulation and epigenetic manipulation of prime editing. Biorxiv : the Preprint Server For Biology. PMID 37090511 DOI: 10.1101/2023.04.12.536587  0.467
2023 Chardon FM, McDiarmid TA, Page NF, Martin B, Domcke S, Regalado SG, Lalanne JÆ, Calderon D, Starita LM, Sanders SJ, Ahituv N, Shendure J. Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements. Biorxiv : the Preprint Server For Biology. PMID 37034704 DOI: 10.1101/2023.03.28.534017  0.495
2023 Johnson GE, Parker DJ, Lalanne JB, Parker ML, Li GW. BaM-seq and TBaM-seq, highly multiplexed and targeted RNA-seq protocols for rapid, low-cost library generation from bacterial samples. Nar Genomics and Bioinformatics. 5: lqad017. PMID 36879903 DOI: 10.1093/nargab/lqad017  0.528
2021 Lalanne JB, Li GW. First-principles model of optimal translation factors stoichiometry. Elife. 10. PMID 34590582 DOI: 10.7554/eLife.69222  0.501
2021 Taggart JC, Lalanne JB, Li GW. Quantitative Control for Stoichiometric Protein Synthesis. Annual Review of Microbiology. PMID 34343023 DOI: 10.1146/annurev-micro-041921-012646  0.545
2021 Mori M, Zhang Z, Banaei-Esfahani A, Lalanne JB, Okano H, Collins BC, Schmidt A, Schubert OT, Lee DS, Li GW, Aebersold R, Hwa T, Ludwig C. From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions. Molecular Systems Biology. 17: e9536. PMID 34032011 DOI: 10.15252/msb.20209536  0.49
2021 McCormick DM, Lalanne JB, Lan TCT, Rouskin S, Li GW. Sigma factor dependent translational activation in . Rna (New York, N.Y.). PMID 33927010 DOI: 10.1261/rna.078747.121  0.574
2021 Lalanne JB, Parker DJ, Li GW. Spurious regulatory connections dictate the expression-fitness landscape of translation factors. Molecular Systems Biology. 17: e10302. PMID 33900014 DOI: 10.15252/msb.202110302  0.51
2020 Johnson GE, Lalanne JB, Peters ML, Li GW. Functionally uncoupled transcription-translation in Bacillus subtilis. Nature. PMID 32848247 DOI: 10.1038/S41586-020-2638-5  0.581
2020 Parker DJ, Lalanne JB, Kimura S, Johnson GE, Waldor MK, Li GW. Growth-Optimized Aminoacyl-tRNA Synthetase Levels Prevent Maximal tRNA Charging. Cell Systems. PMID 32726597 DOI: 10.1016/J.Cels.2020.07.005  0.45
2020 Harden TT, Herlambang KS, Chamberlain M, Lalanne JB, Wells CD, Li GW, Landick R, Hochschild A, Kondev J, Gelles J. Alternative transcription cycle for bacterial RNA polymerase. Nature Communications. 11: 448. PMID 31974358 DOI: 10.1038/S41467-019-14208-9  0.546
2018 DeLoughery A, Lalanne JB, Losick R, Li GW. Maturation of polycistronic mRNAs by the endoribonuclease RNase Y and its associated Y-complex in . Proceedings of the National Academy of Sciences of the United States of America. PMID 29794222 DOI: 10.1073/Pnas.1803283115  0.499
2018 Lalanne JB, Taggart JC, Guo MS, Herzel L, Schieler A, Li GW. Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry. Cell. PMID 29606352 DOI: 10.1016/J.Cell.2018.03.007  0.57
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