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Jordan A Berg - Publications

Affiliations: 
University of Utah, Salt Lake City, UT 
Area:
Biochemistry, Metabolism, Computational Biology
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ouyang Y, Jeong MY, Cunningham CN, Berg JA, Toshniwal AG, Hughes CE, Seiler K, Van Vranken JG, Cluntun AA, Lam G, Winter JM, Akdoǧan E, Dove KK, Nowinski SM, West M, et al. Phosphate starvation signaling increases mitochondrial membrane potential through respiration-independent mechanisms. Elife. 13. PMID 38251707 DOI: 10.7554/eLife.84282  0.565
2023 Li Y, Chaurasia B, Rahman MM, Kaddai V, Maschek JA, Berg JA, Wilkerson JL, Mahmassani ZS, Cox J, Wei P, Meikle PJ, Atkinson D, Wang L, Poss AM, Playdon MC, et al. Ceramides increase fatty acid utilization in intestinal progenitors to enhance stemness and increase tumor risk. Gastroenterology. PMID 37541526 DOI: 10.1053/j.gastro.2023.07.017  0.518
2023 Berg JA, Zhou Y, Ouyang Y, Cluntun AA, Waller TC, Conway ME, Nowinski SM, Van Ry T, George I, Cox JE, Wang B, Rutter J. Metaboverse enables automated discovery and visualization of diverse metabolic regulatory patterns. Nature Cell Biology. PMID 37012464 DOI: 10.1038/s41556-023-01117-9  0.757
2023 Hicks KG, Cluntun AA, Schubert HL, Hackett SR, Berg JA, Leonard PG, Ajalla Aleixo MA, Zhou Y, Bott AJ, Salvatore SR, Chang F, Blevins A, Barta P, Tilley S, Leifer A, et al. Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase. Science (New York, N.Y.). 379: 996-1003. PMID 36893255 DOI: 10.1126/science.abm3452  0.706
2022 Winter JM, Fresenius HL, Cunningham CN, Wei P, Keys HR, Berg JA, Bott AJ, Yadav T, Ryan JA, Sirohi D, Tripp SR, Barta P, Agarwal N, Letai A, Sabatini DM, et al. Collateral deletion of the mitochondrial AAA+ ATPase ATAD1 sensitizes cancer cells to proteasome dysfunction. Elife. 11. PMID 36409067 DOI: 10.7554/eLife.82860  0.738
2021 Nuebel E, Morgan JT, Fogarty S, Winter JM, Lettlova S, Berg JA, Chen YC, Kidwell CU, Maschek JA, Clowers KJ, Argyriou C, Chen L, Wittig I, Cox JE, Roh-Johnson M, et al. The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Disorder. Embo Reports. e51991. PMID 34351705 DOI: 10.15252/embr.202051991  0.599
2020 Cluntun AA, Badolia R, Lettlova S, Parnell KM, Shankar TS, Diakos NA, Olson KA, Taleb I, Tatum SM, Berg JA, Cunningham CN, Van Ry T, Bott AJ, Krokidi AT, Fogarty S, et al. The pyruvate-lactate axis modulates cardiac hypertrophy and heart failure. Cell Metabolism. PMID 33333007 DOI: 10.1016/j.cmet.2020.12.003  0.698
2020 Nowinski SM, Solmonson A, Rusin SF, Maschek JA, Bensard CL, Fogarty S, Jeong MY, Lettlova S, Berg JA, Morgan JT, Ouyang Y, Naylor BC, Paulo JA, Funai K, Cox JE, et al. Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria. Elife. 9. PMID 32804083 DOI: 10.7554/Elife.58041  0.615
2020 Berg JA, Belyeu JR, Morgan JT, Ouyang Y, Bott AJ, Quinlan AR, Gertz J, Rutter J. XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data. Plos Computational Biology. 16: e1007625. PMID 32004313 DOI: 10.1371/Journal.Pcbi.1007625  0.731
2020 Waller TC, Berg JA, Lex A, Chapman BE, Rutter J. Compartment and hub definitions tune metabolic networks for metabolomic interpretations. Gigascience. 9. PMID 31972021 DOI: 10.1093/Gigascience/Giz137  0.57
2020 Nowinski SM, Solmonson A, Rusin SF, Maschek JA, Bensard CL, Fogarty S, Jeong M, Lettlova S, Berg JA, Morgan JT, Ouyang Y, Naylor BC, Paulo JA, Funai K, Cox JE, et al. Author response: Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria Elife. DOI: 10.7554/Elife.58041.Sa2  0.612
2020 Nowinski SM, Solmonson AD, Rusin SF, Bensard C, Bott AJ, Morgan JT, Fogarty S, Lettlova S, Berg JA, Gygi SP, Winge DR, Deberardinis R, Rutter JP. Mitochondrial fatty acid synthesis: not just another way to make fatty acids The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.09469  0.733
2019 Bensard CL, Wisidigama DR, Olson KA, Berg JA, Krah NM, Schell JC, Nowinski SM, Fogarty S, Bott AJ, Wei P, Dove KK, Tanner JM, Panic V, Cluntun A, Lettlova S, et al. Regulation of Tumor Initiation by the Mitochondrial Pyruvate Carrier. Cell Metabolism. PMID 31813825 DOI: 10.1016/J.Cmet.2019.11.002  0.718
2018 Sharma R, Berg JA, Beatty NJ, Choi MC, Cowger AE, Cozzens BJR, Duncan SG, Fajardo CP, Ferguson HP, Galbraith T, Herring JA, Hoj TR, Durrant JL, Hyde JR, Jensen GL, et al. Genome Sequences of Nine Erwinia amylovora Bacteriophages. Microbiology Resource Announcements. 7. PMID 30533701 DOI: 10.1128/MRA.00944-18  0.587
2018 Berg JA, Merrill BD, Breakwell DP, Hope S, Grose JH. A PCR-BASED METHOD FOR DISTINGUISHING BETWEEN TWO COMMON BEEHIVE BACTERIA, PAENIBACILLUS LARVAE AND BREVIBACILLUS LATEROSPORUS. Applied and Environmental Microbiology. PMID 30217838 DOI: 10.1128/Aem.01886-18  0.595
2018 Van Vranken JG, Nowinski SM, Clowers KJ, Jeong MY, Ouyang Y, Berg JA, Gygi JP, Gygi SP, Winge DR, Rutter J. ACP Acylation Is an Acetyl-CoA-Dependent Modification Required for Electron Transport Chain Assembly. Molecular Cell. 71: 567-580.e4. PMID 30118679 DOI: 10.1016/J.Molcel.2018.06.039  0.567
2018 Walker JK, Merrill BD, Berg JA, Dhalai A, Dingman DW, Fajardo CP, Graves K, Hill HL, Hilton JA, Imahara C, Knabe BK, Mangohig J, Monk J, Mun H, Payne AM, et al. Complete Genome Sequences of Paenibacillus larvae Phages BN12, Dragolir, Kiel007, Leyra, Likha, Pagassa, PBL1c, and Tadhana. Genome Announcements. 6. PMID 29903825 DOI: 10.1128/Genomea.01602-17  0.598
2017 Esplin IND, Berg JA, Sharma R, Allen RC, Arens DK, Ashcroft CR, Bairett SR, Beatty NJ, Bickmore M, Bloomfield TJ, Brady TS, Bybee RN, Carter JL, Choi MC, Duncan S, et al. Genome Sequences of 19 Novel Erwinia amylovora Bacteriophages. Genome Announcements. 5. PMID 29146842 DOI: 10.1128/Genomea.00931-17  0.595
2016 Berg JA, Merrill BD, Crockett JT, Esplin KP, Evans MR, Heaton KE, Hilton JA, Hyde JR, McBride MS, Schouten JT, Simister AR, Thurgood TL, Ward AT, Breakwell DP, Hope S, et al. Characterization of Five Novel Brevibacillus Bacteriophages and Genomic Comparison of Brevibacillus Phages. Plos One. 11: e0156838. PMID 27304881 DOI: 10.1371/Journal.Pone.0156838  0.625
2015 Merrill BD, Berg JA, Graves KA, Ward AT, Hilton JA, Wake BN, Grose JH, Breakwell DP, Burnett SH. Genome Sequences of Five Additional Brevibacillus laterosporus Bacteriophages. Genome Announcements. 3. PMID 26494658 DOI: 10.1128/Genomea.01146-15  0.593
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