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Kiryl D. Piatkevich - Publications

Affiliations: 
2019- School of Life Sciences Westlake University 
Area:
Neuroscience,Brain Disease,Imaging Tool
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Lowet E, Sheehan DJ, Chialva U, De Oliveira Pena R, Mount RA, Xiao S, Zhou SL, Tseng HA, Gritton H, Shroff S, Kondabolu K, Cheung C, Wang Y, Piatkevich KD, Boyden ES, et al. Theta and gamma rhythmic coding through two spike output modes in the hippocampus during spatial navigation. Cell Reports. 42: 112906. PMID 37540599 DOI: 10.1016/j.celrep.2023.112906  0.522
2023 Zhao S, Piatkevich KD. Techniques for in vivo serotonin detection in the brain: State of the art. Journal of Neurochemistry. 166: 453-480. PMID 37293767 DOI: 10.1111/jnc.15865  0.735
2023 Subach OM, Varfolomeeva L, Vlaskina AV, Agapova YK, Nikolaeva AY, Piatkevich KD, Patrushev MV, Boyko KM, Subach FV. FNCaMP, ratiometric green calcium indicator based on mNeonGreen protein. Biochemical and Biophysical Research Communications. 665: 169-177. PMID 37163937 DOI: 10.1016/j.bbrc.2023.04.108  0.32
2023 Subach OM, Vlaskina AV, Agapova YK, Nikolaeva AY, Anokhin KV, Piatkevich KD, Patrushev MV, Boyko KM, Subach FV. Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers. International Journal of Molecular Sciences. 24. PMID 36834686 DOI: 10.3390/ijms24043279  0.328
2022 Subach OM, Vlaskina AV, Agapova YK, Korzhenevskiy DA, Nikolaeva AY, Varizhuk AM, Subach MF, Patrushev MV, Piatkevich KD, Boyko KM, Subach FV. cNTnC and fYTnC2, Genetically Encoded Green Calcium Indicators Based on Troponin C from Fast Animals. International Journal of Molecular Sciences. 23. PMID 36498942 DOI: 10.3390/ijms232314614  0.349
2022 Li L, Sun C, Sun Y, Dong Z, Wu R, Sun X, Zhang H, Jiang W, Zhou Y, Cen X, Cai S, Xia H, Zhu Y, Guo T, Piatkevich KD. Spatially resolved proteomics via tissue expansion. Nature Communications. 13: 7242. PMID 36450705 DOI: 10.1038/s41467-022-34824-2  0.721
2022 Liang GT, Lai C, Yue Z, Zhang H, Li D, Chen Z, Lu X, Tao L, Subach FV, Piatkevich KD. Enhanced small green fluorescent proteins as a multisensing platform for biosensor development. Frontiers in Bioengineering and Biotechnology. 10: 1039317. PMID 36324888 DOI: 10.3389/fbioe.2022.1039317  0.71
2022 Subach OM, Vlaskina AV, Agapova YK, Piatkevich KD, Patrushev MV, Samygina VR, Subach FV. LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes' Shift. International Journal of Molecular Sciences. 23. PMID 36232354 DOI: 10.3390/ijms231911051  0.318
2022 Papadaki S, Wang X, Wang Y, Zhang H, Jia S, Liu S, Yang M, Zhang D, Jia JM, Köster RW, Namikawa K, Piatkevich KD. Dual-expression system for blue fluorescent protein optimization. Scientific Reports. 12: 10190. PMID 35715437 DOI: 10.1038/s41598-022-13214-0  0.721
2022 Torres Cabán CC, Yang M, Lai C, Yang L, Subach FV, Smith BO, Piatkevich KD, Boyden ES. Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies. Acs Sensors. PMID 35427452 DOI: 10.1021/acssensors.1c02201  0.628
2021 Babakhanova S, Jung EE, Namikawa K, Zhang H, Wang Y, Subach OM, Korzhenevskiy DA, Rakitina TV, Xiao X, Wang W, Shi J, Drobizhev M, Park D, Eisenhard L, Tang H, ... ... Piatkevich KD, et al. Rapid Directed Molecular Evolution of Fluorescent Proteins in Mammalian Cells. Protein Science : a Publication of the Protein Society. PMID 34913537 DOI: 10.1002/pro.4261  0.774
2021 Subach OM, Vlaskina AV, Agapova YK, Dorovatovskii PV, Nikolaeva AY, Ivashkina OI, Popov VO, Piatkevich KD, Khrenova MG, Smirnova TA, Boyko KM, Subach FV. LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift. International Journal of Molecular Sciences. 22. PMID 34884694 DOI: 10.3390/ijms222312887  0.346
2021 Xiao S, Lowet E, Gritton HJ, Fabris P, Wang Y, Sherman J, Mount RA, Tseng HA, Man HY, Straub C, Piatkevich KD, Boyden ES, Mertz J, Han X. Large-scale voltage imaging in behaving mice using targeted illumination. Iscience. 24: 103263. PMID 34761183 DOI: 10.1016/j.isci.2021.103263  0.553
2021 Wang Y, Zhu D, Liu B, Piatkevich KD. Craniotomy Procedure for Visualizing Neuronal Activities in Hippocampus of Behaving Mice. Journal of Visualized Experiments : Jove. PMID 34369928 DOI: 10.3791/62266  0.337
2021 Gao R, Yu CJ, Gao L, Piatkevich KD, Neve RL, Munro JB, Upadhyayula S, Boyden ES. A highly homogeneous polymer composed of tetrahedron-like monomers for high-isotropy expansion microscopy. Nature Nanotechnology. PMID 33782587 DOI: 10.1038/s41565-021-00875-7  0.489
2020 Linghu C, Johnson SL, Valdes PA, Shemesh OA, Park WM, Park D, Piatkevich KD, Wassie AT, Liu Y, An B, Barnes SA, Celiker OT, Yao CC, Yu CJ, Wang R, et al. Spatial Multiplexing of Fluorescent Reporters for Imaging Signaling Network Dynamics. Cell. PMID 33232692 DOI: 10.1016/j.cell.2020.10.035  0.743
2020 Qian Y, Cosio DMO, Piatkevich KD, Aufmkolk S, Su WC, Celiker OT, Schohl A, Murdock MH, Aggarwal A, Chang YF, Wiseman PW, Ruthazer ES, Boyden ES, Campbell RE. Improved genetically encoded near-infrared fluorescent calcium ion indicators for in vivo imaging. Plos Biology. 18: e3000965. PMID 33232322 DOI: 10.1371/journal.pbio.3000965  0.618
2020 Shemesh OA, Linghu C, Piatkevich KD, Goodwin D, Celiker OT, Gritton HJ, Romano MF, Gao R, Yu CJ, Tseng HA, Bensussen S, Narayan S, Yang CT, Freifeld L, Siciliano CA, et al. Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator. Neuron. PMID 32592656 DOI: 10.1016/J.Neuron.2020.05.029  0.777
2020 Subach OM, Sotskov VP, Plusnin VV, Gruzdeva AM, Barykina NV, Ivashkina OI, Anokhin KV, Nikolaeva AY, Korzhenevskiy DA, Vlaskina AV, Lazarenko VA, Boyko KM, Rakitina TV, Varizhuk AM, Pozmogova GE, ... ... Piatkevich KD, et al. Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein. International Journal of Molecular Sciences. 21. PMID 32121243 DOI: 10.3390/Ijms21051644  0.6
2020 Fan LZ, Kheifets S, Böhm UL, Wu H, Piatkevich KD, Xie ME, Parot V, Ha Y, Evans KE, Boyden ES, Takesian AE, Cohen AE. All-Optical Electrophysiology Reveals the Role of Lateral Inhibition in Sensory Processing in Cortical Layer 1. Cell. PMID 31978320 DOI: 10.1016/J.Cell.2020.01.001  0.472
2019 Piatkevich KD, Bensussen S, Tseng HA, Shroff SN, Lopez-Huerta VG, Park D, Jung EE, Shemesh OA, Straub C, Gritton HJ, Romano MF, Costa E, Sabatini BL, Fu Z, Boyden ES, et al. Population imaging of neural activity in awake behaving mice. Nature. PMID 31597963 DOI: 10.1038/S41586-019-1641-1  0.782
2019 Subach OM, Barykina NV, Anokhin KV, Piatkevich KD, Subach FV. Near-Infrared Genetically Encoded Positive Calcium Indicator Based on GAF-FP Bacterial Phytochrome. International Journal of Molecular Sciences. 20. PMID 31315229 DOI: 10.3390/Ijms20143488  0.306
2019 Subach OM, Kunitsyna TA, Mineyeva OA, Lazutkin AA, Bezryadnov DV, Barykina NV, Piatkevich KD, Ermakova YG, Bilan DS, Belousov VV, Anokhin KV, Enikolopov GN, Subach FV. Slowly Reducible Genetically Encoded Green Fluorescent Indicator for In Vivo and Ex Vivo Visualization of Hydrogen Peroxide. International Journal of Molecular Sciences. 20. PMID 31252566 DOI: 10.3390/Ijms20133138  0.302
2019 Qian Y, Piatkevich KD, Mc Larney B, Abdelfattah AS, Mehta S, Murdock MH, Gottschalk S, Molina RS, Zhang W, Chen Y, Wu J, Drobizhev M, Hughes TE, Zhang J, Schreiter ER, et al. A genetically encoded near-infrared fluorescent calcium ion indicator. Nature Methods. PMID 30664778 DOI: 10.1038/S41592-018-0294-6  0.56
2018 Shemesh OA, Tanese D, Zampini V, Linghu C, Piatkevich K, Ronzitti E, Papagiakoumou E, Boyden ES, Emiliani V. Publisher Correction: Temporally precise single-cell-resolution optogenetics. Nature Neuroscience. PMID 29549318 DOI: 10.1038/s41593-018-0097-1  0.737
2018 Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk HJ, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N, Kawashima T, Yang CT, Rhoades JL, Shemesh O, Asano S, et al. Publisher Correction: A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. Nature Chemical Biology. PMID 29520042 DOI: 10.1038/S41589-018-0023-6  0.713
2018 Piatkevich KD, Jung EE, Straub C, Linghu C, Park D, Suk HJ, Hochbaum DR, Goodwin D, Pnevmatikakis E, Pak N, Kawashima T, Yang CT, Rhoades JL, Shemesh O, Asano S, et al. A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. Nature Chemical Biology. PMID 29483642 DOI: 10.1038/S41589-018-0004-9  0.753
2017 Shemesh OA, Tanese D, Zampini V, Linghu C, Piatkevich K, Ronzitti E, Papagiakoumou E, Boyden ES, Emiliani V. Temporally precise single-cell-resolution optogenetics. Nature Neuroscience. 20: 1796-1806. PMID 29184208 DOI: 10.1038/s41593-017-0018-8  0.764
2017 Rowlands CJ, Park D, Bruns OT, Piatkevich KD, Fukumura D, Jain RK, Bawendi MG, Boyden ES, So PT. Wide-field three-photon excitation in biological samples. Light, Science & Applications. 6: e16255. PMID 29152380 DOI: 10.1038/Lsa.2016.255  0.523
2017 Piatkevich KD, Suk HJ, Kodandaramaiah SB, Yoshida F, DeGennaro EM, Drobizhev M, Hughes TE, Desimone R, Boyden ES, Verkhusha VV. Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging. Biophysical Journal. PMID 29017728 DOI: 10.1016/J.Bpj.2017.09.007  0.69
2017 Barykina NV, Subach OM, Piatkevich KD, Jung EE, Malyshev AY, Smirnov IV, Bogorodskiy AO, Borshchevskiy VI, Varizhuk AM, Pozmogova GE, Boyden ES, Anokhin KV, Enikolopov GN, Subach FV. Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. Plos One. 12: e0183757. PMID 28837632 DOI: 10.1371/Journal.Pone.0183757  0.778
2016 Tillberg PW, Chen F, Piatkevich KD, Zhao Y, Yu CJ, English BP, Gao L, Martorell A, Suk HJ, Yoshida F, DeGennaro EM, Roossien DH, Gong G, Seneviratne U, Tannenbaum SR, et al. Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies. Nature Biotechnology. PMID 27376584 DOI: 10.1038/Nbt.3625  0.731
2014 Piatkevich KD, Subach FV, Verkhusha VV. Far-red light photoactivatable near-infrared fluorescent proteins engineered from a bacterial phytochrome. Nature Communications. 4: 2153. PMID 23842578 DOI: 10.1038/ncomms3153  0.344
2013 Piatkevich KD, Subach FV, Verkhusha VV. Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals. Chemical Society Reviews. 42: 3441-52. PMID 23361376 DOI: 10.1039/c3cs35458j  0.309
2011 Subach FV, Piatkevich KD, Verkhusha VV. Directed molecular evolution to design advanced red fluorescent proteins. Nature Methods. 8: 1019-26. PMID 22127219 DOI: 10.1038/nmeth.1776  0.342
2011 Filonov GS, Piatkevich KD, Ting LM, Zhang J, Kim K, Verkhusha VV. Bright and stable near-infrared fluorescent protein for in vivo imaging. Nature Biotechnology. 29: 757-61. PMID 21765402 DOI: 10.1038/Nbt.1918  0.333
2011 Piatkevich KD, Verkhusha VV. Guide to red fluorescent proteins and biosensors for flow cytometry. Methods in Cell Biology. 102: 431-61. PMID 21704849 DOI: 10.1016/B978-0-12-374912-3.00017-1  0.311
2011 Wu B, Piatkevich KD, Lionnet T, Singer RH, Verkhusha VV. Modern fluorescent proteins and imaging technologies to study gene expression, nuclear localization, and dynamics. Current Opinion in Cell Biology. 23: 310-7. PMID 21242078 DOI: 10.1016/j.ceb.2010.12.004  0.349
2010 Morozova KS, Piatkevich KD, Gould TJ, Zhang J, Bewersdorf J, Verkhusha VV. Far-red fluorescent protein excitable with red lasers for flow cytometry and superresolution STED nanoscopy. Biophysical Journal. 99: L13-5. PMID 20643047 DOI: 10.1016/J.Bpj.2010.04.025  0.309
2010 Piatkevich KD, Hulit J, Subach OM, Wu B, Abdulla A, Segall JE, Verkhusha VV. Monomeric red fluorescent proteins with a large Stokes shift. Proceedings of the National Academy of Sciences of the United States of America. 107: 5369-74. PMID 20212155 DOI: 10.1073/Pnas.0914365107  0.336
2009 Piatkevich KD, Verkhusha VV. Advances in engineering of fluorescent proteins and photoactivatable proteins with red emission. Current Opinion in Chemical Biology. 14: 23-9. PMID 19914857 DOI: 10.1016/j.cbpa.2009.10.011  0.318
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