| Year |
Citation |
Score |
| 2023 |
Hasterok S, Scott TG, Roller DG, Spencer A, Dutta AB, Sathyan KM, Frigo DE, Guertin MJ, Gioeli D. The androgen receptor does not directly regulate the transcription of DNA damage response genes. Molecular Cancer Research : McR. PMID 37698543 DOI: 10.1158/1541-7786.MCR-23-0358 |
0.761 |
|
| 2023 |
Scott TG, Sathyan KM, Gioeli D, Guertin MJ. TRPS1 modulates chromatin accessibility to regulate estrogen receptor (ER) binding and ER target gene expression in luminal breast cancer cells. Biorxiv : the Preprint Server For Biology. PMID 37461612 DOI: 10.1101/2023.07.03.547524 |
0.309 |
|
| 2023 |
Wolpe JB, Martins AL, Guertin MJ. Correction of transposase sequence bias in ATAC-seq data with rule ensemble modeling. Nar Genomics and Bioinformatics. 5: lqad054. PMID 37274120 DOI: 10.1093/nargab/lqad054 |
0.379 |
|
| 2023 |
Dutta AB, Lank DS, Przanowska RK, Przanowski P, Wang L, Nguyen B, Walavalkar NM, Duarte FM, Guertin MJ. Kinetic networks identify TWIST2 as a key regulatory node in adipogenesis. Genome Research. PMID 36810156 DOI: 10.1101/gr.277559.122 |
0.777 |
|
| 2022 |
Hu SS, Liu L, Li Q, Ma W, Guertin MJ, Meyer CA, Deng K, Zhang T, Zang C. Intrinsic bias estimation for improved analysis of bulk and single-cell chromatin accessibility profiles using SELMA. Nature Communications. 13: 5533. PMID 36130957 DOI: 10.1038/s41467-022-33194-z |
0.32 |
|
| 2022 |
Guertin MJ, Nguyen B, Walavalkar N, Duarte F, Dutta AB. Kinetic networks identify key regulatory nodes and transcription factor functions in early adipogenesis. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 35553462 DOI: 10.1096/fasebj.2022.36.S1.R3047 |
0.524 |
|
| 2022 |
Przanowska RK, Weidmann CA, Saha S, Cichewicz MA, Jensen KN, Przanowski P, Irving PS, Janes KA, Guertin MJ, Weeks KM, Dutta A. Distinct MUNC lncRNA structural domains regulate transcription of different promyogenic factors. Cell Reports. 38: 110361. PMID 35172143 DOI: 10.1016/j.celrep.2022.110361 |
0.384 |
|
| 2021 |
Smith JP, Dutta AB, Sathyan KM, Guertin MJ, Sheffield NC. PEPPRO: quality control and processing of nascent RNA profiling data. Genome Biology. 22: 155. PMID 33992117 DOI: 10.1186/s13059-021-02349-4 |
0.714 |
|
| 2020 |
Burchfiel ET, Vihervaara A, Guertin MJ, Gomez-Pastor R, Thiele DJ. Comparative interactomes of HSF1 in stress and disease reveal a role for CTCF in HSF1-mediated gene regulation. The Journal of Biological Chemistry. PMID 33208463 DOI: 10.1074/jbc.RA120.015452 |
0.363 |
|
| 2020 |
Anderson WD, Duarte FM, Civelek M, Guertin MJ. Defining data-driven primary transcript annotations with primaryTranscriptAnnotation in R. Bioinformatics (Oxford, England). PMID 31917388 DOI: 10.1093/Bioinformatics/Btaa011 |
0.597 |
|
| 2019 |
Sathyan KM, McKenna BD, Anderson WD, Duarte FM, Core L, Guertin MJ. An improved auxin-inducible degron system preserves native protein levels and enables rapid and specific protein depletion. Genes & Development. PMID 31467088 DOI: 10.1101/Gad.328237.119 |
0.724 |
|
| 2018 |
Pincus D, Anandhakumar J, Thiru P, Guertin MJ, Erkine AM, Gross DS. Genetic and epigenetic determinants establish a continuum of Hsf1 occupancy and activity across the yeast genome. Molecular Biology of the Cell. mbcE18060353. PMID 30332327 DOI: 10.1091/Mbc.E18-06-0353 |
0.577 |
|
| 2018 |
Pfister K, Pipka JL, Chiang C, Liu Y, Clark RA, Keller R, Skoglund P, Guertin MJ, Hall IM, Stukenberg PT. Identification of Drivers of Aneuploidy in Breast Tumors. Cell Reports. 23: 2758-2769. PMID 29847804 DOI: 10.1016/J.Celrep.2018.04.102 |
0.312 |
|
| 2018 |
Guertin MJ, Cullen AE, Markowetz F, Holding AN. Parallel factor ChIP provides essential internal control for quantitative differential ChIP-seq. Nucleic Acids Research. PMID 29672735 DOI: 10.1093/Nar/Gky252 |
0.438 |
|
| 2018 |
Wang Z, Civelek M, Miller CL, Sheffield NC, Guertin MJ, Zang C. BART: a transcription factor prediction tool with query gene sets or epigenomic profiles. Bioinformatics (Oxford, England). PMID 29608647 DOI: 10.1093/Bioinformatics/Bty194 |
0.575 |
|
| 2017 |
Martins AL, Walavalkar NM, Anderson WD, Zang C, Guertin MJ. Universal correction of enzymatic sequence bias reveals molecular signatures of protein/DNA interactions. Nucleic Acids Research. PMID 29126307 DOI: 10.1093/Nar/Gkx1053 |
0.369 |
|
| 2017 |
Liu Y, Walavalkar NM, Dozmorov MG, Rich SS, Civelek M, Guertin MJ. Identification of breast cancer associated variants that modulate transcription factor binding. Plos Genetics. 13: e1006761. PMID 28957321 DOI: 10.1371/Journal.Pgen.1006761 |
0.391 |
|
| 2017 |
Vihervaara A, Mahat DB, Guertin MJ, Chu T, Danko CG, Lis JT, Sistonen L. Transcriptional response to stress is pre-wired by promoter and enhancer architecture. Nature Communications. 8: 255. PMID 28811569 DOI: 10.1038/S41467-017-00151-0 |
0.738 |
|
| 2017 |
Pooley JR, Flynn BP, Grøntved L, Baek S, Guertin MJ, Kershaw YM, Birnie MT, Pellatt A, Rivers CA, Schiltz RL, Hager GL, Lightman SL, Conway-Campbell BL. Genome-wide identification of basic helix-loop helix and NF-1 motifs underlying GR binding sites in male rat hippocampus. Endocrinology. PMID 28200020 DOI: 10.1210/En.2016-1929 |
0.473 |
|
| 2017 |
Walavalkar N, Lee N, Guertin M. Identifying Transcription Factors that Dictate Drug-Resistance in Acute Lymphoblastic Leukemia Clinical Lymphoma Myeloma and Leukemia. 17: S258-S259. DOI: 10.1016/J.Clml.2017.07.023 |
0.357 |
|
| 2016 |
Duarte FM, Fuda NJ, Mahat DB, Core LJ, Guertin MJ, Lis JT. Transcription factors GAF and HSF act at distinct regulatory steps to modulate stress-induced gene activation. Genes & Development. PMID 27492368 DOI: 10.1101/Gad.284430.116 |
0.755 |
|
| 2015 |
Fuda NJ, Guertin MJ, Sharma S, Danko CG, Martins AL, Siepel A, Lis JT. GAGA factor maintains nucleosome-free regions and has a role in RNA polymerase II recruitment to promoters. Plos Genetics. 11: e1005108. PMID 25815464 DOI: 10.1371/Journal.Pgen.1005108 |
0.799 |
|
| 2014 |
Sung MH, Guertin MJ, Baek S, Hager GL. DNase footprint signatures are dictated by factor dynamics and DNA sequence. Molecular Cell. 56: 275-85. PMID 25242143 DOI: 10.1016/J.Molcel.2014.08.016 |
0.461 |
|
| 2014 |
Guertin MJ, Zhang X, Anguish L, Kim S, Varticovski L, Lis JT, Hager GL, Coonrod SA. Targeted H3R26 deimination specifically facilitates estrogen receptor binding by modifying nucleosome structure. Plos Genetics. 10: e1004613. PMID 25211228 DOI: 10.1371/Journal.Pgen.1004613 |
0.642 |
|
| 2014 |
Guertin MJ, Zhang X, Coonrod SA, Hager GL. Transient estrogen receptor binding and p300 redistribution support a squelching mechanism for estradiol-repressed genes. Molecular Endocrinology (Baltimore, Md.). 28: 1522-33. PMID 25051172 DOI: 10.1210/Me.2014-1130 |
0.53 |
|
| 2013 |
Guertin MJ, Lis JT. Mechanisms by which transcription factors gain access to target sequence elements in chromatin. Current Opinion in Genetics & Development. 23: 116-23. PMID 23266217 DOI: 10.1016/J.Gde.2012.11.008 |
0.652 |
|
| 2012 |
Zhang X, Bolt M, Guertin MJ, Chen W, Zhang S, Cherrington BD, Slade DJ, Dreyton CJ, Subramanian V, Bicker KL, Thompson PR, Mancini MA, Lis JT, Coonrod SA. Peptidylarginine deiminase 2-catalyzed histone H3 arginine 26 citrullination facilitates estrogen receptor α target gene activation. Proceedings of the National Academy of Sciences of the United States of America. 109: 13331-6. PMID 22853951 DOI: 10.1073/Pnas.1203280109 |
0.592 |
|
| 2012 |
Guertin MJ, Martins AL, Siepel A, Lis JT. Accurate prediction of inducible transcription factor binding intensities in vivo. Plos Genetics. 8: e1002610. PMID 22479205 DOI: 10.1371/Journal.Pgen.1002610 |
0.633 |
|
| 2010 |
Guertin MJ, Petesch SJ, Zobeck KL, Min IM, Lis JT. Drosophila heat shock system as a general model to investigate transcriptional regulation. Cold Spring Harbor Symposia On Quantitative Biology. 75: 1-9. PMID 21467139 DOI: 10.1101/Sqb.2010.75.039 |
0.778 |
|
| 2010 |
Guertin MJ, Lis JT. Chromatin landscape dictates HSF binding to target DNA elements. Plos Genetics. 6: e1001114. PMID 20844575 DOI: 10.1371/Journal.Pgen.1001114 |
0.654 |
|
| 2010 |
Carmon A, Guertin MJ, Grushko O, Marshall B, MacIntyre R. A molecular analysis of mutations at the complex dumpy locus in Drosophila melanogaster. Plos One. 5: e12319. PMID 20811586 DOI: 10.1371/Journal.Pone.0012319 |
0.591 |
|
| 1996 |
Savard F, Richard C, Guertin M. The Chlamydomonas reinhardtii LI818 gene represents a distant relative of the cabI/II genes that is regulated during the cell cycle and in response to illumination. Plant Molecular Biology. 32: 461-73. PMID 8980495 DOI: 10.1007/Bf00019098 |
0.314 |
|
| 1994 |
Couture M, Chamberland H, St-Pierre B, Lafontaine J, Guertin M. Nuclear genes encoding chloroplast hemoglobins in the unicellular green alga Chlamydomonas eugametos Mgg Molecular & General Genetics. 243: 185-197. PMID 8177215 DOI: 10.1007/Bf00280316 |
0.31 |
|
| 1993 |
Bernier D, Thomassin H, Allard D, Guertin M, Hamel D, Blaquière M, Beauchemin M, LaRue H, Estable-Puig M, Bélanger L. Functional analysis of developmentally regulated chromatin-hypersensitive domains carrying the α1-fetoprotein gene promoter and the albumin/α1-fetoprotein intergenic enhancer Molecular and Cellular Biology. 13: 1619-1633. PMID 7680097 DOI: 10.1128/Mcb.13.3.1619 |
0.41 |
|
| 1988 |
Guertin M, LaRue H, Bernier D, Wrange O, Chevrette M, Gingras MC, Belanger L. Enhancer and promoter elements directing activation and glucocorticoid repression of the α1-fetoprotein gene in hepatocytes Molecular and Cellular Biology. 8: 1398-1407. PMID 2454390 DOI: 10.1128/Mcb.8.4.1398 |
0.393 |
|
| 1986 |
Turcotte B, Guertin M, Chevrette M, LaRue H, Bélanger L. DNase I hypersensitivity and methylation of the 5'-flanking region of the α1-fetoprotein gene during developmental and glucocorticoid-induced represssion of its activity in rat liver Nucleic Acids Research. 14: 9827-9841. PMID 2433681 DOI: 10.1093/Nar/14.24.9827 |
0.343 |
|
| 1985 |
Turcotte B, Guertin M, Chevrette M, Bélanger L. Rat α1-fetoprotein messenger RNA: 5′-end sequence and glucocorticoid-suppressed liver transcription in an improved nuclear run-off assay Nucleic Acids Research. 13: 2387-2398. PMID 2582363 DOI: 10.1093/Nar/13.7.2387 |
0.371 |
|
| 1983 |
Guertin M, Baril P, Bartkowiak J, Andersen A, Belanger L. Rapid suppression of α1-fetoprotein gene transcription by dexamethasone in developing rat liver Biochemistry. 22: 4296-4302. PMID 6194818 DOI: 10.1021/Bi00287A021 |
0.358 |
|
| 1983 |
Belanger L, Baril P, Guertin M, Gingras MC, Gourdeau H, Anderson A, Hamel D, Boucher JM. Oncodevelopmental and hormonal regulation of α1-fetoprotein gene expression Advances in Enzyme Regulation. 21: 73-76,IN1-IN2,77,78,. PMID 6085825 DOI: 10.1016/0065-2571(83)90009-2 |
0.389 |
|
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