Fei Zhang - Publications

Affiliations: 
Arizona State University, Tempe, AZ, United States 

58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Lee JY, Yang Q, Chang X, Jeziorek M, Perumal D, Olivera TR, Etchegaray JP, Zhang F. Self-assembly of DNA parallel double-crossover motifs. Nanoscale. PMID 38193377 DOI: 10.1039/d3nr05119f  0.488
2023 Yang Q, Chang X, Lee JY, Saji M, Zhang F. DNA T-shaped crossover tiles for 2D tessellation and nanoring reconfiguration. Nature Communications. 14: 7675. PMID 37996416 DOI: 10.1038/s41467-023-43558-8  0.528
2023 Narayanan RP, Prasad A, Buchberger A, Zou L, Bernal-Chanchavac J, MacCulloch T, Fahmi NE, Yan H, Zhang F, Webber MJ, Stephanopoulos N. High-Affinity Host-Guest Recognition for Efficient Assembly and Enzymatic Responsiveness of DNA Nanostructures. Small (Weinheim An Der Bergstrasse, Germany). e2307585. PMID 37849034 DOI: 10.1002/smll.202307585  0.818
2023 Tang Y, Liu H, Wang Q, Qi X, Yu L, Šulc P, Zhang F, Yan H, Jiang S. DNA Origami Tessellations. Journal of the American Chemical Society. PMID 37329284 DOI: 10.1021/jacs.3c03044  0.816
2022 Fu D, Pradeep Narayanan R, Prasad A, Zhang F, Williams D, Schreck JS, Yan H, Reif J. Automated design of 3D DNA origami with non-rasterized 2D curvature. Science Advances. 8: eade4455. PMID 36563147 DOI: 10.1126/sciadv.ade4455  0.81
2022 Narayanan RP, Procyk J, Nandi P, Prasad A, Xu Y, Poppleton E, Williams D, Zhang F, Yan H, Chiu PL, Stephanopoulos N, Šulc P. Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein-DNA Nanostructures. Acs Nano. PMID 35980981 DOI: 10.1021/acsnano.2c04013  0.829
2022 Lee JY, Yang Q, Chang X, Wisniewski H, Olivera TR, Saji M, Kim S, Perumal D, Zhang F. Nucleic acid paranemic structures: a promising building block for functional nanomaterials in biomedical and bionanotechnological applications. Journal of Materials Chemistry. B. PMID 35912570 DOI: 10.1039/d2tb00605g  0.494
2022 Fu J, Zhang F. Self-assembly of Nucleic Acids: From Structures to Biomedical Applications. Current Topics in Medicinal Chemistry. 22: 639. PMID 35708099 DOI: 10.2174/156802662208220503005318  0.465
2022 Yang Q, Chang X, Lee JY, Olivera TR, Saji M, Wisniewski H, Kim S, Zhang F. Recent Advances in Self-Assembled DNA Nanostructures for Bioimaging. Acs Applied Bio Materials. PMID 35559619 DOI: 10.1021/acsabm.2c00128  0.492
2022 Dey S, Dorey A, Abraham L, Xing Y, Zhang I, Zhang F, Howorka S, Yan H. A reversibly gated protein-transporting membrane channel made of DNA. Nature Communications. 13: 2271. PMID 35484117 DOI: 10.1038/s41467-022-28522-2  0.636
2022 Chang X, Yang Q, Lee J, Zhang F. Self-Assembled Nucleic Acid Nanostructures for Biomedical Applications. Current Topics in Medicinal Chemistry. PMID 35319373 DOI: 10.2174/1568026622666220321140729  0.514
2021 Pathak PK, Zhang F, Peng S, Niu L, Chaturvedi J, Elliott J, Xiang Y, Tadege M, Deng J. Structure of the unique tetrameric STENOFOLIA homeodomain bound with target promoter DNA. Acta Crystallographica. Section D, Structural Biology. 77: 1050-1063. PMID 34342278 DOI: 10.1107/S205979832100632X  0.339
2020 Yao G, Zhang F, Wang F, Peng T, Liu H, Poppleton E, Šulc P, Jiang S, Liu L, Gong C, Jing X, Liu X, Wang L, Liu Y, Fan C, et al. Author Correction: Meta-DNA structures. Nature Chemistry. PMID 33235323 DOI: 10.1038/s41557-020-00611-z  0.748
2020 Yao G, Zhang F, Wang F, Peng T, Liu H, Poppleton E, Šulc P, Jiang S, Liu L, Gong C, Jing X, Liu X, Wang L, Liu Y, Fan C, et al. Meta-DNA structures. Nature Chemistry. PMID 32895523 DOI: 10.1038/S41557-020-0539-8  0.825
2020 Zhang B, Zhao S, Wan H, Liu Y, Zhang F, Guo X, Zeng W, Zhang H, Zeng L, Qu J, Wu BQ, Wan X, Cantor CR, Ge D. High-resolution DNA size enrichment using a magnetic nano-platform and application in non-invasive prenatal testing. The Analyst. PMID 32748914 DOI: 10.1039/D0An00813C  0.381
2020 Jiang S, Zhang F, Yan H. Complex assemblies and crystals guided by DNA. Nature Materials. 19: 694-700. PMID 32581353 DOI: 10.1038/S41563-020-0719-3  0.798
2020 Stephanopoulos N, Simmons CR, MacCulloch T, Zhang F, Liu Y, Yan H. A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High Resolution Structural Detail. Angewandte Chemie (International Ed. in English). PMID 32533629 DOI: 10.1002/Anie.202005505  0.564
2020 Poppleton E, Bohlin J, Matthies M, Sharma S, Zhang F, Šulc P. Design, optimization and analysis of large DNA and RNA nanostructures through interactive visualization, editing and molecular simulation. Nucleic Acids Research. PMID 32449920 DOI: 10.1093/nar/gkaa417  0.359
2020 Xu Y, Jiang S, Simmons CR, Narayanan RP, Zhang F, Aziz AM, Yan H, Stephanopoulos N. Correction to Tunable Nanoscale Cages from Self-Assembling DNA and Protein Building Blocks. Acs Nano. PMID 32420729 DOI: 10.1021/Acsnano.0C02484  0.788
2020 Qi X, Liu X, Matiski L, Rodriguez Del Villar R, Yip T, Zhang F, Sokalingam S, Jiang S, Liu L, Yan H, Chang Y. RNA Origami Nanostructures for Potent and Safe Anti-Cancer Immunotherapy. Acs Nano. PMID 32275389 DOI: 10.1021/Acsnano.0C00602  0.76
2020 Fu X, Peng F, Lee J, Yang Q, Zhang F, Xiong M, Kong G, Meng HM, Ke G, Zhang XB. Aptamer-Functionalized DNA Nanostructures for Biological Applications. Topics in Current Chemistry (Cham). 378: 21. PMID 32030541 DOI: 10.1007/S41061-020-0283-Y  0.781
2019 Chen H, Li M, Lu Z, Wang X, Yang J, Wang Z, Zhang F, Gu C, Zhang W, Sun Y, Sun J, Zhu W, Guo X. Multistep nucleation and growth mechanisms of organic crystals from amorphous solid states. Nature Communications. 10: 3872. PMID 31455804 DOI: 10.1038/S41467-019-11887-2  0.313
2019 Jing X, Zhang F, Pan M, Dai X, Li J, Wang L, Liu X, Yan H, Fan C. Solidifying framework nucleic acids with silica. Nature Protocols. PMID 31270509 DOI: 10.1038/S41596-019-0184-0  0.657
2019 Su C, Weir JD, Zhang F, Yan H, Wu T. ENTRNA: a framework to predict RNA foldability. Bmc Bioinformatics. 20: 373. PMID 31269893 DOI: 10.1186/S12859-019-2948-5  0.419
2019 Zhou Y, Qi X, Liu Y, Zhang F, Yan H. DNA Nanoscaffold-Assisted Selection of Femtomolar Bivalent Aptamers for Human α-Thrombin with Potent Anticoagulant Activity. Chembiochem : a European Journal of Chemical Biology. PMID 31083763 DOI: 10.1002/Cbic.201900265  0.667
2019 Xu Y, Jiang S, Simmons CR, Narayanan RP, Zhang F, Aziz AM, Yan H, Stephanopoulos N. Tunable Nanoscale Cages from Self-Assembling DNA and Protein Building Blocks. Acs Nano. PMID 30835439 DOI: 10.1021/Acsnano.8B09798  0.827
2019 Jun H, Zhang F, Shepherd T, Ratanalert S, Qi X, Yan H, Bathe M. Autonomously designed free-form 2D DNA origami. Science Advances. 5: eaav0655. PMID 30613779 DOI: 10.1126/Sciadv.Aav0655  0.737
2019 Simmons CR, MacCulloch T, Zhang F, Liu Y, Stephanopoulos N, Yan H. Structure of a self-assembled three-dimensional DNA crystal framework for the precise organization of biomaterials Acta Crystallographica Section a Foundations and Advances. 75: a144-a144. DOI: 10.1107/S0108767319098556  0.604
2019 Zhou Y, Qi X, Liu Y, Zhang F, Yan H. Front Cover: DNA‐Nanoscaffold‐Assisted Selection of Femtomolar Bivalent Human α‐Thrombin Aptamers with Potent Anticoagulant Activity (ChemBioChem 19/2019) Chembiochem. 20: 2420-2420. DOI: 10.1002/Cbic.201900578  0.53
2018 Qi X, Zhang F, Su Z, Jiang S, Han D, Ding B, Liu Y, Chiu W, Yin P, Yan H. Programming molecular topologies from single-stranded nucleic acids. Nature Communications. 9: 4579. PMID 30389935 DOI: 10.1038/S41467-018-07039-7  0.819
2018 Hong F, Jiang S, Lan X, Narayanan RP, Šulc P, Zhang F, Liu Y, Yan H. Layered-Crossover Tiles with Precisely Tunable Angles for 2D and 3D DNA Crystal Engineering. Journal of the American Chemical Society. PMID 30336007 DOI: 10.1021/Jacs.8B07180  0.815
2018 Zhang F, Simmons CR, Gates J, Liu Y, Yan H. Self-Assembly of a 3D DNA Crystal Structure with Rationally Designed Six-Fold Symmetry. Angewandte Chemie (International Ed. in English). PMID 30066355 DOI: 10.1002/Anie.201807223  0.642
2018 Liu X, Zhang F, Jing X, Pan M, Liu P, Li W, Zhu B, Li J, Chen H, Wang L, Lin J, Liu Y, Zhao D, Yan H, Fan C. Complex silica composite nanomaterials templated with DNA origami. Nature. PMID 30013119 DOI: 10.1038/S41586-018-0332-7  0.683
2018 Simmons CR, Zhang F, Liu Y, Yan H. Crystal structure of a rationally designed six-fold symmetric DNA scaffold for the precise organization of biomolecules Acta Crystallographica Section a Foundations and Advances. 74: a289-a289. DOI: 10.1107/S0108767318097106  0.616
2017 Zhang F, Yan H. DNA self-assembly scaled up. Nature. 552: 34-35. PMID 32080514 DOI: 10.1038/D41586-017-07690-Y  0.597
2017 Han D, Qi X, Myhrvold C, Wang B, Dai M, Jiang S, Bates M, Liu Y, An B, Zhang F, Yan H, Yin P. Single-stranded DNA and RNA origami. Science (New York, N.Y.). 358. PMID 29242318 DOI: 10.1126/Science.Aao2648  0.823
2017 Zhang F, Yan H. DNA self-assembly scaled up. Nature. 552: 34-35. PMID 29220007 DOI: 10.1038/d41586-017-07690-y  0.54
2017 Simmons CR, Zhang F, MacCulloch T, Fahmi NE, Stephanopoulos N, Liu Y, Seeman NC, Yan H. Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals. Journal of the American Chemical Society. PMID 28731332 DOI: 10.1021/Jacs.7B06485  0.744
2017 Hong F, Zhang F, Liu Y, Yan H. DNA Origami: Scaffolds for Creating Higher Order Structures. Chemical Reviews. PMID 28605177 DOI: 10.1021/Acs.Chemrev.6B00825  0.827
2017 Simmons CR, Zhang F, MacCulloch T, Fahmi NE, Stephanopoulos N, Liu Y, Yan H. Enantiomeric structures of a self-assembling three-dimensional DNA crystal scaffold Acta Crystallographica Section a Foundations and Advances. 73: a53-a53. DOI: 10.1107/S0108767317099470  0.618
2016 Zhang F, Hong F, Yan H. DNA origami tiles: Nanoscale mazes. Nature Nanotechnology. PMID 27893728 DOI: 10.1038/Nnano.2016.263  0.763
2016 Simmons CR, Zhang F, Birktoft JJ, Qi X, Han D, Liu Y, Sha R, Abdallah H, Hernandez C, Ohayon Y, Seeman NC, Yan H. Correction to "Construction and Structure Determination of a Three-dimensional DNA Crystal". Journal of the American Chemical Society. PMID 27643407 DOI: 10.1021/Jacs.6B09106  0.82
2016 Simmons CR, Zhang F, Birktoft JJ, Qi X, Han D, Liu Y, Sha R, Abdallah H, Hernandez C, Ohayon Y, Seeman NC, Yan H. Construction and Structure Determination of a Three-dimensional DNA Crystal. Journal of the American Chemical Society. PMID 27447429 DOI: 10.1021/Jacs.6B06508  0.844
2016 Zhang F, Jiang S, Li W, Hunt A, Liu Y, Yan H. Self-Assembly of Complex DNA Tessellations by Using Low-Symmetry Multi-arm DNA Tiles. Angewandte Chemie (International Ed. in English). PMID 27276237 DOI: 10.1002/Anie.201601944  0.839
2016 Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M. Designer nanoscale DNA assemblies programmed from the top down. Science (New York, N.Y.). PMID 27229143 DOI: 10.1126/Science.Aaf4388  0.685
2016 Ke G, Liu M, Jiang S, Qi X, Yang YR, Wootten S, Zhang F, Zhu Z, Liu Y, Yang CJ, Yan H. Directional Regulation of Enzyme Pathways through the Control of Substrate Channeling on a DNA Origami Scaffold. Angewandte Chemie (International Ed. in English). PMID 27159899 DOI: 10.1002/Anie.201603183  0.756
2016 Li W, Zhang F, Yan H, Liu Y. DNA based arithmetic function: a half adder based on DNA strand displacement. Nanoscale. PMID 26814628 DOI: 10.1039/C5Nr08497K  0.637
2016 Ratanalert S, Veneziano R, Zhang K, Pan K, Zhang F, Chiu W, Yan H, Bathe M. Structure-Based Design, Synthesis, and Characterization of Custom DNA Nanoparticles Biophysical Journal. 110: 565a. DOI: 10.1016/J.Bpj.2015.11.3025  0.6
2015 Zhang F, Jiang S, Wu S, Li Y, Mao C, Liu Y, Yan H. Complex wireframe DNA origami nanostructures with multi-arm junction vertices. Nature Nanotechnology. PMID 26192207 DOI: 10.1038/Nnano.2015.162  0.813
2015 Sun H, Zhang T, Fan Q, Qi X, Zhang F, Fang W, Jiang J, Chen F, Chen S. Identification of floral scent in chrysanthemum cultivars and wild relatives by gas chromatography-mass spectrometry. Molecules (Basel, Switzerland). 20: 5346-59. PMID 25816078 DOI: 10.3390/molecules20045346  0.321
2015 Pan K, Kim D, Zhang F, Adendorff M, Yan H, Bathe M. Lattice-Free 3D Structure-Prediction of Programmed DNA Assemblies Biophysical Journal. 108: 232a. DOI: 10.1016/J.Bpj.2014.11.1283  0.655
2014 Pan K, Kim DN, Zhang F, Adendorff MR, Yan H, Bathe M. Lattice-free prediction of three-dimensional structure of programmed DNA assemblies. Nature Communications. 5: 5578. PMID 25470497 DOI: 10.1038/Ncomms6578  0.596
2014 Zhang F, Nangreave J, Liu Y, Yan H. Structural DNA nanotechnology: state of the art and future perspective. Journal of the American Chemical Society. 136: 11198-211. PMID 25029570 DOI: 10.1021/Ja505101A  0.844
2013 Zhang F, Liu Y, Yan H. Complex Archimedean tiling self-assembled from DNA nanostructures. Journal of the American Chemical Society. 135: 7458-61. PMID 23651321 DOI: 10.1021/Ja4035957  0.638
2013 Yang Y, Zhao Z, Zhang F, Nangreave J, Liu Y, Yan H. Self-assembly of DNA rings from scaffold-free DNA tiles. Nano Letters. 13: 1862-6. PMID 23530617 DOI: 10.1021/Nl400859D  0.848
2012 Zhang F, Nangreave J, Liu Y, Yan H. Reconfigurable DNA origami to generate quasifractal patterns. Nano Letters. 12: 3290-5. PMID 22559073 DOI: 10.1021/Nl301399Z  0.838
2009 Chen X, Fan J, Peng X, Wang J, Sun S, Zhang R, Wu T, Zhang F, Liu J, Wang F, Ma S. Bisintercalator-containing dinuclear iron(III) complex: An efficient artificial nuclease. Bioorganic & Medicinal Chemistry Letters. 19: 4139-42. PMID 19539469 DOI: 10.1016/j.bmcl.2009.06.003  0.33
2008 Zheng X, Pontes O, Zhu J, Miki D, Zhang F, Li WX, Iida K, Kapoor A, Pikaard CS, Zhu JK. ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis. Nature. 455: 1259-62. PMID 18815596 DOI: 10.1038/Nature07305  0.409
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