| Year |
Citation |
Score |
| 2020 |
Yuan F, Kim S, Yin X, Zhang X, Kato I. Integrating Two-Dimensional Gas and Liquid Chromatography-Mass Spectrometry for Untargeted Colorectal Cancer Metabolomics: A Proof-of-Principle Study. Metabolites. 10. PMID 32854360 DOI: 10.3390/Metabo10090343 |
0.331 |
|
| 2017 |
Wei X, Lorkiewicz PK, Shi B, Salabei JK, Hill BG, Kim S, McClain CJ, Zhang X. Analysis of Stable Isotope Assisted Metabolomics Data Acquired by High Resolution Mass Spectrometry. Analytical Methods : Advancing Methods and Applications. 9: 2275-2283. PMID 28674558 DOI: 10.1039/C7Ay00291B |
0.349 |
|
| 2016 |
Wang S, Luo M, Zhang Z, Gu J, Chen J, Payne KM, Tan Y, Wang Y, Yin X, Zhang X, Liu GC, Wintergerst K, Liu Q, Zheng Y, Cai L. Zinc deficiency exacerbates while zinc supplement attenuates cardiac hypertrophy in high-fat diet-induced obese mice through modulating p38 MAPK-dependent signaling. Toxicology Letters. PMID 27346292 DOI: 10.1016/J.Toxlet.2016.06.020 |
0.388 |
|
| 2016 |
Koo I, Kim S, Shi B, Lorkiewicz P, Song M, McClain C, Zhang X. EIder: A compound identification tool for gas chromatography mass spectrometry data. Journal of Chromatography. A. PMID 27131963 DOI: 10.1016/J.Chroma.2016.04.064 |
0.315 |
|
| 2015 |
Lu Y, Liu L, Wang Y, Li F, Zhang J, Ye M, Zhao H, Zhang X, Zhang M, Zhao J, Yan B, Yang A, Feng H, Zhang R, Ren X. siRNA delivered by EGFR-specific scFv sensitizes EGFR-TKI-resistant human lung cancer cells. Biomaterials. 76: 196-207. PMID 26524539 DOI: 10.1016/j.biomaterials.2015.10.036 |
0.325 |
|
| 2015 |
Hu J, Tan Z, Ren D, Zhang X, He Y, Bao C, Liu D, Yi Q, Qian W, Yin J, Xu Z, Yu C, Wang S, Wu B, Yang H, et al. Clinical characteristics and risk factors of an outbreak with scrub typhus in previously unrecognized areas, jiangsu province, china 2013. Plos One. 10: e0125999. PMID 25954814 DOI: 10.1371/journal.pone.0125999 |
0.409 |
|
| 2015 |
Kim S, Zhang X. Discovery of False Identification Using Similarity Difference in GC-MS based Metabolomics. Journal of Chemometrics. 29: 80-86. PMID 25937705 DOI: 10.1002/Cem.2665 |
0.337 |
|
| 2015 |
Winnike JH, Wei X, Knagge KJ, Colman SD, Gregory SG, Zhang X. Comparison of GC-MS and GC×GC-MS in the analysis of human serum samples for biomarker discovery. Journal of Proteome Research. 14: 1810-7. PMID 25735966 DOI: 10.1021/Pr5011923 |
0.329 |
|
| 2014 |
Shi X, Yin X, Zhang X. Analysis of Mouse Liver Metabolites by GC × GC–TOF MS Methods of Molecular Biology. 1198: 99-105. PMID 25270925 DOI: 10.1007/978-1-4939-1258-2_7 |
0.333 |
|
| 2014 |
Kim S, Ouyang M, Jeong J, Shen C, Zhang X. A NEW METHOD OF PEAK DETECTION FOR ANALYSIS OF COMPREHENSIVE TWO-DIMENSIONAL GAS CHROMATOGRAPHY MASS SPECTROMETRY DATA. The Annals of Applied Statistics. 8: 1209-1231. PMID 25264474 DOI: 10.1214/14-Aoas731 |
0.311 |
|
| 2014 |
Koo I, Wei X, Zhang X. Analysis of metabolomic profiling data acquired on GC-MS. Methods in Enzymology. 543: 315-24. PMID 24924140 DOI: 10.1016/B978-0-12-801329-8.00016-7 |
0.337 |
|
| 2014 |
Wei X, Koo I, Kim S, Zhang X. Compound identification in GC-MS by simultaneously evaluating the mass spectrum and retention index. The Analyst. 139: 2507-14. PMID 24665464 DOI: 10.1039/C3An02171H |
0.332 |
|
| 2014 |
Koo I, Shi X, Kim S, Zhang X. iMatch2: compound identification using retention index for analysis of gas chromatography-mass spectrometry data. Journal of Chromatography. A. 1337: 202-10. PMID 24630063 DOI: 10.1016/J.Chroma.2014.02.049 |
0.302 |
|
| 2014 |
Wei X, Shi X, Kim S, Patrick JS, Binkley J, Kong M, McClain C, Zhang X. Data dependent peak model based spectrum deconvolution for analysis of high resolution LC-MS data. Analytical Chemistry. 86: 2156-65. PMID 24533635 DOI: 10.1021/Ac403803A |
0.317 |
|
| 2013 |
Laulhé S, Geers TE, Shi X, Zhang X, Nantz MH. Electron Ionization-Induced Release of Coded Isotopic Reporter Ions in an m/z Zone of Minimal Interference for Quantifiable, Multiplexed GC-MS Analyses. Analytical Methods : Advancing Methods and Applications. 5. PMID 24235976 DOI: 10.1039/C3Ay41124A |
0.323 |
|
| 2013 |
Kim S, Zhang X. Comparative analysis of mass spectral similarity measures on peak alignment for comprehensive two-dimensional gas chromatography mass spectrometry. Computational and Mathematical Methods in Medicine. 2013: 509761. PMID 24151524 DOI: 10.1155/2013/509761 |
0.343 |
|
| 2013 |
Phillips M, Cataneo RN, Chaturvedi A, Kaplan PD, Libardoni M, Mundada M, Patel U, Zhang X. Detection of an extended human volatome with comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry. Plos One. 8: e75274. PMID 24086492 DOI: 10.1371/Journal.Pone.0075274 |
0.333 |
|
| 2013 |
Wei X, Shi X, Merrick M, Willis P, Alonso D, Zhang X. A method of aligning peak lists generated by gas chromatography high-resolution mass spectrometry. The Analyst. 138: 5453-60. PMID 23885350 DOI: 10.1039/C3An00667K |
0.341 |
|
| 2013 |
Koo I, Kim S, Zhang X. Comparative analysis of mass spectral matching-based compound identification in gas chromatography-mass spectrometry. Journal of Chromatography. A. 1298: 132-8. PMID 23726352 DOI: 10.1016/J.Chroma.2013.05.021 |
0.304 |
|
| 2013 |
Wei X, Shi X, Koo I, Kim S, Schmidt RH, Arteel GE, Watson WH, McClain C, Zhang X. MetPP: a computational platform for comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry-based metabolomics. Bioinformatics (Oxford, England). 29: 1786-92. PMID 23665844 DOI: 10.1093/Bioinformatics/Btt275 |
0.332 |
|
| 2013 |
Jeong J, Zhang X, Shi X, Kim S, Shen C. An efficient post-hoc integration method improving peak alignment of metabolomics data from GCxGC/TOF-MS. Bmc Bioinformatics. 14: 123. PMID 23575005 DOI: 10.1186/1471-2105-14-123 |
0.302 |
|
| 2012 |
Wei X, Shi X, Kim S, Zhang L, Patrick JS, Binkley J, McClain C, Zhang X. Data preprocessing method for liquid chromatography-mass spectrometry based metabolomics. Analytical Chemistry. 84: 7963-71. PMID 22931487 DOI: 10.1021/Ac3016856 |
0.336 |
|
| 2012 |
Kim S, Koo I, Jeong J, Wu S, Shi X, Zhang X. Compound identification using partial and semipartial correlations for gas chromatography-mass spectrometry data. Analytical Chemistry. 84: 6477-87. PMID 22794294 DOI: 10.1021/Ac301350N |
0.327 |
|
| 2012 |
Zhang J, Koo I, Wang B, Gao QW, Zheng CH, Zhang X. A large scale test dataset to determine optimal retention index threshold based on three mass spectral similarity measures Journal of Chromatography A. 1251: 188-193. PMID 22771253 DOI: 10.1016/J.Chroma.2012.06.036 |
0.329 |
|
| 2012 |
Kim S, Koo I, Wei X, Zhang X. A method of finding optimal weight factors for compound identification in gas chromatography-mass spectrometry. Bioinformatics (Oxford, England). 28: 1158-63. PMID 22333245 DOI: 10.1093/Bioinformatics/Bts083 |
0.322 |
|
| 2012 |
Jeong J, Shi X, Zhang X, Kim S, Shen C. Model-based peak alignment of metabolomic profiling from comprehensive two-dimensional gas chromatography mass spectrometry. Bmc Bioinformatics. 13: 27. PMID 22316124 DOI: 10.1186/1471-2105-13-27 |
0.335 |
|
| 2011 |
Jeong J, Shi X, Zhang X, Kim S, Shen C. An empirical Bayes model using a competition score for metabolite identification in gas chromatography mass spectrometry. Bmc Bioinformatics. 12: 392. PMID 21985394 DOI: 10.1186/1471-2105-12-392 |
0.337 |
|
| 2011 |
Wei X, Sun W, Shi X, Koo I, Wang B, Zhang J, Yin X, Tang Y, Bogdanov B, Kim S, Zhou Z, McClain C, Zhang X. MetSign: a computational platform for high-resolution mass spectrometry-based metabolomics. Analytical Chemistry. 83: 7668-75. PMID 21932828 DOI: 10.1021/Ac2017025 |
0.322 |
|
| 2011 |
Zhang J, Fang A, Wang B, Kim SH, Bogdanov B, Zhou Z, McClain C, Zhang X. iMatch: a retention index tool for analysis of gas chromatography-mass spectrometry data. Journal of Chromatography. A. 1218: 6522-30. PMID 21813131 DOI: 10.1016/J.Chroma.2011.07.039 |
0.309 |
|
| 2011 |
Kim S, Koo I, Fang A, Zhang X. Smith-Waterman peak alignment for comprehensive two-dimensional gas chromatography-mass spectrometry. Bmc Bioinformatics. 12: 235. PMID 21676240 DOI: 10.1186/1471-2105-12-235 |
0.348 |
|
| 2011 |
Koo I, Zhang X, Kim S. Wavelet- and Fourier-transform-based spectrum similarity approaches to compound identification in gas chromatography/mass spectrometry. Analytical Chemistry. 83: 5631-8. PMID 21651237 DOI: 10.1021/Ac200740W |
0.33 |
|
| 2011 |
Riley CP, Zhang X, Nakshatri H, Schneider B, Regnier FE, Adamec J, Buck C. A large, consistent plasma proteomics data set from prospectively collected breast cancer patient and healthy volunteer samples. Journal of Translational Medicine. 9: 80. PMID 21619653 DOI: 10.1186/1479-5876-9-80 |
0.422 |
|
| 2011 |
Kim S, Fang A, Wang B, Jeong J, Zhang X. An optimal peak alignment for comprehensive two-dimensional gas chromatography mass spectrometry using mixture similarity measure. Bioinformatics (Oxford, England). 27: 1660-6. PMID 21493650 DOI: 10.1093/Bioinformatics/Btr188 |
0.347 |
|
| 2010 |
Wang B, Valentine S, Plasencia M, Zhang X. Prediction of drift time in ion mobility-mass spectrometry based on Peptide molecular weight. Protein and Peptide Letters. 17: 1143-7. PMID 20509855 DOI: 10.2174/092986610791760360 |
0.307 |
|
| 2010 |
Wang B, Fang A, Heim J, Bogdanov B, Pugh S, Libardoni M, Zhang X. DISCO: distance and spectrum correlation optimization alignment for two-dimensional gas chromatography time-of-flight mass spectrometry-based metabolomics. Analytical Chemistry. 82: 5069-81. PMID 20476746 DOI: 10.1021/Ac100064B |
0.334 |
|
| 2010 |
Zhang X, Fang A, Riley CP, Wang M, Regnier FE, Buck C. Multi-dimensional liquid chromatography in proteomics--a review. Analytica Chimica Acta. 664: 101-13. PMID 20363391 DOI: 10.1016/J.Aca.2010.02.001 |
0.527 |
|
| 2009 |
Wang B, Valentine S, Raghuraman S, Plasencia M, Zhang X. Prediction of peptide drift time in ion mobility-mass spectrometry Bmc Bioinformatics. 10: 1-2. PMID 19735588 DOI: 10.1186/1471-2105-10-S7-A1 |
0.322 |
|
| 2009 |
Xie J, Yin J, Sun S, Xie F, Zhang X, Guo Y. Extraction and derivatization in single drop coupled to MALDI-FTICR-MS for selective determination of small molecule aldehydes in single puff smoke. Analytica Chimica Acta. 638: 198-201. PMID 19327460 DOI: 10.1016/J.Aca.2009.02.036 |
0.306 |
|
| 2008 |
Ralston-Hooper K, Hopf A, Oh C, Zhang X, Adamec J, Sepúlveda MS. Development of GCxGC/TOF-MS metabolomics for use in ecotoxicological studies with invertebrates. Aquatic Toxicology (Amsterdam, Netherlands). 88: 48-52. PMID 18423646 DOI: 10.1016/J.Aquatox.2008.03.002 |
0.338 |
|
| 2008 |
Zhang M, Ouyang Q, Stephenson A, Kane MD, Salt DE, Prabhakar S, Burgner J, Buck C, Zhang X. Interactive analysis of systems biology molecular expression data. Bmc Systems Biology. 2: 23. PMID 18312669 DOI: 10.1186/1752-0509-2-23 |
0.429 |
|
| 2008 |
Oh C, Huang X, Regnier FE, Buck C, Zhang X. Comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry peak sorting algorithm. Journal of Chromatography. A. 1179: 205-15. PMID 18093607 DOI: 10.1016/J.Chroma.2007.11.101 |
0.415 |
|
| 2007 |
Shen C, Wang Z, Shankar G, Zhang X, Li L. A hierarchical statistical model to assess the confidence of peptides and proteins inferred from tandem mass spectrometry. Bioinformatics (Oxford, England). 24: 202-8. PMID 18024968 DOI: 10.1093/Bioinformatics/Btm555 |
0.336 |
|
| 2007 |
Oh C, Zak SH, Mirzaei H, Buck C, Regnier FE, Zhang X. Neural network prediction of peptide separation in strong anion exchange chromatography. Bioinformatics (Oxford, England). 23: 114-8. PMID 17092987 DOI: 10.1093/Bioinformatics/Btl561 |
0.588 |
|
| 2007 |
Qiu R, Zhang X, Regnier FE. A method for the identification of glycoproteins from human serum by a combination of lectin affinity chromatography along with anion exchange and Cu-IMAC selection of tryptic peptides. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 845: 143-50. PMID 16945596 DOI: 10.1016/J.Jchromb.2006.08.007 |
0.483 |
|
| 2007 |
Wang HY, Zhang X, Guo YL, Lu L. Mass spectrometric studies of the gas phase retro-Michael type fragmentation reactions of 2-hydroxybenzyl-N-pyrimidinylamine derivatives. Journal of the American Society For Mass Spectrometry. 16: 1561-1573. PMID 16006143 DOI: 10.1016/J.Jasms.2005.05.006 |
0.308 |
|
| 2006 |
Asara JM, Zhang X, Zheng B, Maroney LA, Christofk HR, Wu N, Cantley LC. In-gel stable isotope labeling for relative quantification using mass spectrometry Nature Protocols. 1: 46-51. PMID 17406210 DOI: 10.1038/Nprot.2006.7 |
0.344 |
|
| 2006 |
Pevtsov S, Fedulova I, Mirzaei H, Buck C, Zhang X. Performance evaluation of existing de novo sequencing algorithms. Journal of Proteome Research. 5: 3018-28. PMID 17081053 DOI: 10.1021/Pr060222H |
0.494 |
|
| 2006 |
Zhang X, Guo Y. Electrospray ionization mass spectrometric study on the α‐fluorination of aldehydes Rapid Communications in Mass Spectrometry. 20: 3477-3480. PMID 17066373 DOI: 10.1002/Rcm.2735 |
0.307 |
|
| 2006 |
Asara JM, Zhang X, Zheng B, Christofk HH, Wu N, Cantley LC. In-gel Stable-Isotope Labeling (ISIL): A strategy for mass spectrometry-based relative quantification Journal of Proteome Research. 5: 155-163. PMID 16396506 DOI: 10.1021/Pr050334T |
0.336 |
|
| 2005 |
Zhang X, Asara JM, Adamec J, Ouzzani M, Elmagarmid AK. Data pre-processing in liquid chromatography-mass spectrometry-based proteomics. Bioinformatics (Oxford, England). 21: 4054-9. PMID 16150809 DOI: 10.1093/Bioinformatics/Bti660 |
0.337 |
|
| 2005 |
Zhang X, Hines W, Adamec J, Asara JM, Naylor S, Regnier FE. An automated method for the analysis of stable isotope labeling data in proteomics. Journal of the American Society For Mass Spectrometry. 16: 1181-91. PMID 15922621 DOI: 10.1016/J.Jasms.2005.03.016 |
0.525 |
|
| 2004 |
Clish CB, Davidov E, Oresic M, Plasterer TN, Lavine G, Londo T, Meys M, Snell P, Stochaj W, Adourian A, Zhang X, Morel N, Neumann E, Verheij E, Vogels JT, et al. Integrative biological analysis of the APOE*3-leiden transgenic mouse. Omics : a Journal of Integrative Biology. 8: 3-13. PMID 15107233 DOI: 10.1089/153623104773547453 |
0.409 |
|
| 2002 |
Wang S, Zhang X, Regnier FE. Quantitative proteomics strategy involving the selection of peptides containing both cysteine and histidine from tryptic digests of cell lysates. Journal of Chromatography. A. 949: 153-62. PMID 11999731 DOI: 10.1016/S0021-9673(01)01509-6 |
0.519 |
|
| 2001 |
He B, Burke BJ, Zhang X, Zhang R, Regnier FE. A picoliter-volume mixer for microfluidic analytical systems. Analytical Chemistry. 73: 1942-7. PMID 11354474 DOI: 10.1021/Ac000850X |
0.604 |
|
| 2001 |
Geng M, Zhang X, Bina M, Regnier F. Proteomics of glycoproteins based on affinity selection of glycopeptides from tryptic digests. Journal of Chromatography. B, Biomedical Sciences and Applications. 752: 293-306. PMID 11270868 DOI: 10.1016/S0378-4347(00)00550-8 |
0.476 |
|
| 2000 |
Ji J, Chakraborty A, Geng M, Zhang X, Amini A, Bina M, Regnier F. Strategy for qualitative and quantitative analysis in proteomics based on signature peptides. Journal of Chromatography. B, Biomedical Sciences and Applications. 745: 197-210. PMID 10997715 DOI: 10.1016/S0378-4347(00)00192-4 |
0.655 |
|
| 2000 |
Zhang X, Regnier FE. Analysis of channel-geometry effects on separation efficiency in rectangular-capillary electrochromatography columns. Journal of Chromatography. A. 869: 319-28. PMID 10720247 DOI: 10.1016/S0021-9673(99)01022-5 |
0.394 |
|
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