| Year |
Citation |
Score |
| 2013 |
Schurr JM, Fujimoto BS, Huynh L, Chiu DT. A theory of macromolecular chemotaxis. The Journal of Physical Chemistry. B. 117: 7626-52. PMID 23656252 DOI: 10.1021/Jp302587D |
0.689 |
|
| 2013 |
Schurr JM, Fujimoto BS. Supercoiled pseudocircular domains in single-twisted DNAs under tension: Elastic constants and unwinding dynamics in complexes with topo I. Biopolymers. 99: 1046-69. PMID 23640759 DOI: 10.1002/Bip.22272 |
0.751 |
|
| 2008 |
Rangel DP, Fujimoto BS, Schurr JM. Estimation of the persistence length of DNA from the torsion elastic constant and supercoiling free energy: effect of ethylene glycol. The Journal of Physical Chemistry. B. 112: 13359-66. PMID 18717543 DOI: 10.1021/Jp801526W |
0.797 |
|
| 2007 |
Mutch SA, Fujimoto BS, Kuyper CL, Kuo JS, Bajjalieh SM, Chiu DT. Deconvolving single-molecule intensity distributions for quantitative microscopy measurements. Biophysical Journal. 92: 2926-43. PMID 17259276 DOI: 10.1529/Biophysj.106.101428 |
0.306 |
|
| 2007 |
Rangel DP, Brewood GP, Fujimoto BS, Schurr JM. Effects of ethylene glycol on the torsion elastic constant and hydrodynamic radius of p30delta DNA. Biopolymers. 85: 222-32. PMID 17111396 DOI: 10.1002/Bip.20634 |
0.815 |
|
| 2006 |
Fujimoto BS, Brewood GP, Schurr JM. Torsional rigidities of weakly strained DNAs. Biophysical Journal. 91: 4166-79. PMID 16963514 DOI: 10.1529/Biophysj.106.087593 |
0.819 |
|
| 2005 |
Fujimoto BS, Schurr JM. Can reliable torsion elastic constants be determined from FPA data on 24 and 27 base-pair DNAs? Biophysical Chemistry. 116: 41-55. PMID 15911081 DOI: 10.1016/J.Bpc.2005.02.001 |
0.76 |
|
| 2004 |
Rangel DP, Sucato CA, Spink CH, Fujimoto BS, Schurr JM. Effects of small neutral osmolytes on the supercoiling free energy and intrinsic twist of p30delta DNA. Biopolymers. 75: 291-313. PMID 15386272 DOI: 10.1002/Bip.20111 |
0.789 |
|
| 2004 |
Sucato CA, Rangel DP, Aspleaf D, Fujimoto BS, Schurr JM. Monte Carlo simulations of locally melted supercoiled DNAs in 20 mM ionic strength. Biophysical Journal. 86: 3079-96. PMID 15111422 DOI: 10.1016/S0006-3495(04)74357-X |
0.781 |
|
| 2003 |
Schurr JM, Fujimoto BS. Equalities for the Nonequilibrium Work Transferred from an External Potential to a Molecular System. Analysis of Single-Molecule Extension Experiments Journal of Physical Chemistry B. 107: 14007-14019. DOI: 10.1021/Jp0306803 |
0.664 |
|
| 2003 |
Schurr JM, Fujimoto BS. Extensions of counterion condensation theory. 2. Cell model and osmotic pressure of DNA Journal of Physical Chemistry B. 107: 4451-4458. DOI: 10.1021/Jp0223861 |
0.726 |
|
| 2002 |
Schurr JM, Fujimoto BS. Extensions of counterion condensation theory. I. Alternative geometries and finite salt concentration. Biophysical Chemistry. 101: 425-45. PMID 12488018 DOI: 10.1016/S0301-4622(02)00178-3 |
0.689 |
|
| 2002 |
Fujimoto BS, Schurr JM. Monte Carlo simulations of supercoiled DNAs confined to a plane. Biophysical Journal. 82: 944-62. PMID 11806935 DOI: 10.1016/S0006-3495(02)75455-6 |
0.744 |
|
| 2001 |
Naimushin AN, Quach N, Fujimoto BS, Schurr JM. Effect of polyethylene glycol on the supercoiling free energy of DNA. Biopolymers. 58: 204-17. PMID 11093119 DOI: 10.1002/1097-0282(200102)58:2<204::Aid-Bip90>3.0.Co;2-1 |
0.829 |
|
| 2000 |
Schurr JM, Fujimoto BS. The distribution of end-to-end distances of the weakly bending rod model. Biopolymers. 54: 561-71. PMID 10984407 DOI: 10.1002/1097-0282(200012)54:7<561::Aid-Bip80>3.0.Co;2-M |
0.678 |
|
| 2000 |
Naimushin AN, Fujimoto BS, Schurr JM. Dynamic bending rigidity of a 200-bp DNA in 4 mM ionic strength: a transient polarization grating study. Biophysical Journal. 78: 1498-518. PMID 10692335 DOI: 10.1016/S0006-3495(00)76703-8 |
0.821 |
|
| 1999 |
Schurr JM, Fujimoto BS. Dynamic twisting correlations in a model DNA with uniform torsion elastic constant. Biopolymers. 49: 355-359. PMID 11180045 DOI: 10.1002/(Sici)1097-0282(19990415)49:5<355::Aid-Bip2>3.0.Co;2-X |
0.756 |
|
| 1999 |
Schurr JM, Fujimoto BS, Diaz R, Robinson BH. Manifestations of slow site exchange processes in solution NMR: a continuous Gaussian exchange model. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 140: 404-31. PMID 10497047 DOI: 10.1006/Jmre.1999.1858 |
0.685 |
|
| 1999 |
Naimushin AN, Fujimoto BS, Delrow JJ, Schurr JM. A transient polarization grating method to study tumbling and bending dynamics of DNA Review of Scientific Instruments. 70: 2471-2480. DOI: 10.1063/1.1149780 |
0.807 |
|
| 1999 |
Naimushin AN, Fujimoto BS, Schurr JM. Effect of intermolecular electrostatic interactions on the end-over-end rotational dynamics of 200-base-pair DNAs Macromolecules. 32: 8210-8219. DOI: 10.1021/Ma990690V |
0.825 |
|
| 1998 |
Delrow JJ, Heath PJ, Fujimoto BS, Schurr JM. Effect of temperature on DNA secondary structure in the absence and presence of 0.5 M tetramethylammonium chloride. Biopolymers. 45: 503-15. PMID 9577231 DOI: 10.1002/(Sici)1097-0282(199806)45:7<503::Aid-Bip4>3.0.Co;2-S |
0.817 |
|
| 1997 |
Schurr JM, Delrow JJ, Fujimoto BS, Benight AS. The question of long-range allosteric transitions in DNA. Biopolymers. 44: 283-308. PMID 9591480 DOI: 10.1002/(Sici)1097-0282(1997)44:3<283::Aid-Bip7>3.0.Co;2-R |
0.826 |
|
| 1997 |
Schurr JM, Fujimoto BS, Reese A, Robinson BH, Allison SA. Comment on “Diffusional spinning as a probe of DNA fragments conformation” [J. Chem. Phys. 104, 6058 (1996)] The Journal of Chemical Physics. 106: 815-816. DOI: 10.1063/1.473965 |
0.785 |
|
| 1996 |
Gebe JA, Delrow JJ, Heath PJ, Fujimoto BS, Stewart DW, Schurr JM. Effects of Na+ and Mg2+ on the structures of supercoiled DNAs: comparison of simulations with experiments. Journal of Molecular Biology. 262: 105-28. PMID 8831783 DOI: 10.1006/Jmbi.1996.0502 |
0.812 |
|
| 1996 |
Heath PJ, Clendenning JB, Fujimoto BS, Schurr JM. Effect of bending strain on the torsion elastic constant of DNA. Journal of Molecular Biology. 260: 718-30. PMID 8709150 DOI: 10.1006/Jmbi.1996.0432 |
0.834 |
|
| 1995 |
Fujimoto BS, Willie ST, Reid BR, Schurr JM. Position-dependent internal motions and effective correlation times for magnetization transfer in DNA. Journal of Magnetic Resonance. Series B. 106: 64-7. PMID 7850175 DOI: 10.1006/Jmrb.1995.1009 |
0.708 |
|
| 1994 |
Nuutero S, Fujimoto BS, Flynn PF, Reid BR, Ribeiro NS, Schurr JM. The amplitude of local angular motion of purines in DNA in solution. Biopolymers. 34: 463-80. PMID 8186360 DOI: 10.1002/Bip.360340404 |
0.773 |
|
| 1994 |
Naimushin AN, Clendenning JB, Kim US, Song L, Fujimoto BS, Stewart DW, Schurr JM. Effect of ethidium binding and superhelix density on the apparent supercoiling free energy and torsion constant of pBR322 DNA. Biophysical Chemistry. 52: 219-26. PMID 7999973 DOI: 10.1016/0301-4622(94)00037-K |
0.772 |
|
| 1994 |
Clendenning JB, Naimushin AN, Fujimoto BS, Stewart DW, Schurr JM. Effect of ethidium binding and superhelix density on the supercoiling free energy and torsion and bending constants of p30 delta DNA. Biophysical Chemistry. 52: 191-218. PMID 7999972 DOI: 10.1016/0301-4622(94)00038-L |
0.816 |
|
| 1994 |
Fujimoto BS, Miller JM, Ribeiro NS, Schurr JM. Effects of different cations on the hydrodynamic radius of DNA. Biophysical Journal. 67: 304-8. PMID 7919000 DOI: 10.1016/S0006-3495(94)80481-3 |
0.728 |
|
| 1994 |
Schurr JM, Babcock HP, Fujimoto BS. A test of the model-free formulas. Effects of anisotropic rotational diffusion and dimerization. Journal of Magnetic Resonance. Series B. 105: 211-24. PMID 7850167 DOI: 10.1006/Jmrb.1994.1127 |
0.681 |
|
| 1994 |
Fujimoto BS, Clendenning JB, Delrow JJ, Heath PJ, Schurr M. Fluorescence and Photobleaching Studies of Methylene Blue Binding to DNA The Journal of Physical Chemistry. 98: 6633-6643. DOI: 10.1021/J100077A033 |
0.803 |
|
| 1994 |
Schurr JM, Fujimoto BS, Nuutero S. Theory of Relaxation of Quadrupolar Nuclei in Deformable Molecules in Isotropic Solutions. Application to DNA Journal of Magnetic Resonance, Series A. 106: 1-22. DOI: 10.1006/Jmra.1994.1001 |
0.712 |
|
| 1993 |
Kim US, Fujimoto BS, Furlong CE, Sundstrom JA, Humbert R, Teller DC, Schurr JM. Dynamics and structures of DNA: long-range effects of a 16 base-pair (CG)8 sequence on secondary structure. Biopolymers. 33: 1725-45. PMID 8241430 DOI: 10.1002/Bip.360331110 |
0.808 |
|
| 1991 |
Schurr JM, Kim US, Song L, Fujimoto BS. Dynamics and structures of DNA. Biochemical Society Transactions. 19: 497. PMID 1889659 |
0.715 |
|
| 1991 |
Wu PG, Fujimoto BS, Song L, Schurr JM. Effect of ethidium on the torsion constants of linear and supercoiled DNAs. Biophysical Chemistry. 41: 217-36. PMID 1777574 DOI: 10.1016/0301-4622(91)85038-R |
0.855 |
|
| 1990 |
Song L, Fujimoto BS, Wu PG, Thomas JC, Shibata JH, Schurr JM. Evidence for allosteric transitions in secondary structure induced by superhelical stress. Journal of Molecular Biology. 214: 307-26. PMID 2370668 DOI: 10.1016/0022-2836(90)90163-G |
0.8 |
|
| 1990 |
Fujimoto BS, Schurr JM. Dependence of the torsional rigidity of DNA on base composition. Nature. 344: 175-7. PMID 2308636 DOI: 10.1038/344175A0 |
0.732 |
|
| 1988 |
Schurr JM, Fujimoto BS. The amplitude of local angular motions of intercalated dyes and bases in DNA. Biopolymers. 27: 1543-69. PMID 3233320 DOI: 10.1002/bip.360271003 |
0.71 |
|
| 1988 |
Wu PG, Song L, Clendenning JB, Fujimoto BS, Benight AS, Schurr JM. Interaction of chloroquine with linear and supercoiled DNAs. Effect on the torsional dynamics, rigidity, and twist energy parameter. Biochemistry. 27: 8128-44. PMID 3233199 |
0.85 |
|
| 1987 |
Wu P, Fujimoto BS, Schurr JM. Time-resolved fluorescence polarization anisotropy of short restriction fragments: the friction factor for rotation of DNA about its symmetry axis. Biopolymers. 26: 1463-88. PMID 2822164 DOI: 10.1002/Bip.360260903 |
0.819 |
|
| 1987 |
Fujimoto BS, Schurr JM. An analysis of steady-state fluorescence polarization anisotropy measurements on dyes intercalated in DNA The Journal of Physical Chemistry. 91: 1947-1951. DOI: 10.1021/J100291A052 |
0.726 |
|
| 1985 |
Shibata JH, Fujimoto BS, Schurr JM. Rotational dynamics of DNA from 10(-10) to 10(-5) seconds: comparison of theory with optical experiments. Biopolymers. 24: 1909-30. PMID 4074846 DOI: 10.1002/Bip.360241006 |
0.83 |
|
| 1985 |
Langowski J, Fujimoto BS, Wemmer DE, Benight AS, Drobny G, Shibata JH, Schurr JM. Deformational dynamics and NMR relaxation of supercoiled DNAs. Biopolymers. 24: 1023-56. PMID 4027335 DOI: 10.1002/Bip.360240609 |
0.829 |
|
| 1985 |
Fujimoto BS, Shibata JH, Schurr RL, Schurr JM. Torsional dynamics and rigidity of fractionated poly(dGdC). Biopolymers. 24: 1009-22. PMID 4027334 DOI: 10.1002/bip.360240608 |
0.624 |
|
| 1985 |
Langowski J, Benight AS, Fujimoto BS, Schurr JM, Schomburg U. Change of conformation and internal dynamics of supercoiled DNA upon binding of Escherichia coli single-strand binding protein. Biochemistry. 24: 4022-8. PMID 2996588 |
0.841 |
|
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