Sreetharan Kanthaswamy, Ph.D. - Publications

Affiliations: 
2001 University of California, Davis, Davis, CA 
Area:
Genetics

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Weise JA, Ng J, Oldt RF, Viray J, McCulloh KL, Smith DG, Kanthaswamy S. Genetic differentiation between and within Northern Native American language groups: an argument for the expansion of the Native American CODIS database. Forensic Sciences Research. 7: 662-672. PMID 36817229 DOI: 10.1080/20961790.2021.1963088  0.426
2020 Ito T, Kanthaswamy S, Bunlungsup S, Oldt RF, Houghton P, Hamada Y, Malaivijitnond S. Secondary contact and genomic admixture between rhesus and long-tailed macaques in the Indochina Peninsula. Journal of Evolutionary Biology. 33: 1164-1179. PMID 33448526 DOI: 10.1111/Jeb.13681  0.504
2020 Oldt RF, Bussey KJ, Settles ML, Fass JN, Roberts JA, Reader JR, Komandoor S, Abrich VA, Kanthaswamy S. MYBPC3 Haplotype Linked to Hypertrophic Cardiomyopathy in Rhesus Macaques (Macaca mulatta). Comparative Medicine. PMID 32753092 DOI: 10.30802/Aalas-Cm-19-000108  0.399
2019 Oldt RF, Kanthaswamy S. Expanded CODIS STR allele frequencies - Evidence for the irrelevance of race-based DNA databases. Legal Medicine (Tokyo, Japan). 42: 101642. PMID 31786433 DOI: 10.1016/J.Legalmed.2019.101642  0.434
2019 Kanthaswamy S, Oldt RF, Said R, Grijalva J, Falak A, Jensen A, Vizor C, Houghton P, Bunlungsup S, Malaivijitnond S, Smith DG. Partial Sequence Analyses of Exon 7 of the ABO Locus of Cynomolgus (Macaca fascicularis) and Rhesus (M. mulatta) Macaques: Indeterminate Phenotypes Reveal the Presence of the O Blood Group. Hla. PMID 31448567 DOI: 10.1111/tan.13675  0.42
2018 Kanthaswamy S, Oldt RF, Montes M, Falak A. Comparing two commercial domestic dog (Canis familiaris) STR genotyping kits for forensic identity calculations in a mixed-breed dog population sample. Animal Genetics. PMID 30592310 DOI: 10.1111/Age.12758  0.479
2018 Oldt RF, Kanthaswamy S, Montes M, Schumann L, Grijalva J, Bunlungsup S, Houghton P, Smith DG, Malaivijitnond S. Population genetics of the ABO locus within the rhesus (Macaca mulatta) and cynomolgus (M. fascicularis) macaque hybrid zone. International Journal of Immunogenetics. PMID 30387553 DOI: 10.1111/Iji.12405  0.53
2018 Day GQ, Ng J, Oldt RF, Houghton PW, Smith DG, Kanthaswamy S. DNA-based Determination of Ancestry in Cynomolgus Macaques (Macaca fascicularis). Journal of the American Association For Laboratory Animal Science : Jaalas. PMID 30165920 DOI: 10.30802/Aalas-Jaalas-17-000147  0.629
2018 Kanthaswamy S, Oldt RF, Ng J, Smith DG, Martínez MI, Sariol CA. Determination of major histocompatibility class I and class II genetic composition of the Caribbean Primate Center specific pathogen-free rhesus macaque (Macaca mulatta) colony based on massively parallel sequencing. Journal of Medical Primatology. PMID 29971797 DOI: 10.1111/Jmp.12353  0.478
2018 Kanthaswamy S, Bales KL. Evaluating the genetic status of a closed colony of titi monkeys (Callicebus cupreus) using multigenerational pedigrees. Journal of Medical Primatology. PMID 29388214 DOI: 10.1111/Jmp.12331  0.453
2017 Ng J, Oldt RF, Kanthaswamy S. Assessing the FBI's Native American STR database for random match probability calculations. Legal Medicine (Tokyo, Japan). 30: 52-55. PMID 29175583 DOI: 10.1016/J.Legalmed.2017.10.012  0.368
2017 Bunlungsup S, Kanthaswamy S, Oldt RF, Smith DG, Houghton P, Hamada Y, Malaivijitnond S. Genetic analysis of samples from wild populations opens new perspectives on hybridization between long-tailed (Macaca fascicularis) and rhesus macaques (Macaca mulatta). American Journal of Primatology. PMID 29095514 DOI: 10.1002/Ajp.22726  0.583
2017 Kanthaswamy S, Ng J, Oldt R, Valdivia L, Houghton P, Smith DG. ABO Blood Group Phenotype Frequency Estimation Using Molecular Phenotyping in Rhesus and Cynomolgus Macaques. Hla. PMID 28800212 DOI: 10.1111/tan.13118  0.444
2017 Kanthaswamy S, Oldt RF, Ng J, Ruiz-Lambides AV, Maldonado E, Martínez MI, Sariol CA. Population Genetic Structure of the Cayo Santiago Colony of Rhesus Macaques (Macaca mulatta). Journal of the American Association For Laboratory Animal Science : Jaalas. 56: 396-401. PMID 28724489  0.387
2017 Kanthaswamy S, F Oldt R, Ng J, V Ruiz-Lambides A, Maldonado E, I Martínez M, A Sariol C. Population Genetic Structure of the Cayo Santiago Colony of Rhesus Macaques (Macaca mulatta). Journal of the American Association For Laboratory Animal Science : Jaalas. PMID 28660852  0.393
2017 Kanthaswamy S, Ng J, Oldt RF, Phillippi-Falkenstein K, Kubisch HM. SNP-based genetic characterization of the Tulane National Primate Research Center's conventional and specific pathogen-free rhesus macaque (Macaca mulatta) populations. Journal of Medical Primatology. PMID 28639374 DOI: 10.1111/Jmp.12284  0.475
2017 Wendt FR, King JL, Novroski NM, Churchill JD, Ng J, Oldt RF, McCulloh KL, Weise JA, Smith DG, Kanthaswamy S, Budowle B. Flanking region variation of ForenSeq™ DNA Signature Prep Kit STR and SNP loci in Yavapai Native Americans. Forensic Science International. Genetics. 28: 146-154. PMID 28273507 DOI: 10.1016/J.Fsigen.2017.02.014  0.567
2017 Zhang X, Meng Y, Houghton P, Liu M, Kanthaswamy S, Oldt R, Ng J, Trask JS, Huang R, Singh B, Du H, Smith DG. Ancestry, Plasmodium cynomolgi prevalence and rhesus macaque admixture in cynomolgus macaques (Macaca fascicularis) bred for export in Chinese breeding farms. Journal of Medical Primatology. PMID 28266719 DOI: 10.1111/Jmp.12256  0.641
2016 Xue C, Raveendran M, Harris RA, Fawcett GL, Liu X, White S, Dahdouli M, Rio Deiros D, Below JE, Salerno W, Cox L, Fan G, Ferguson B, Horvath J, Johnson Z, ... Kanthaswamy S, et al. The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences. Genome Research. 26: 1651-1662. PMID 27934697 DOI: 10.1101/Gr.204255.116  0.554
2016 McCulloh KL, Ng J, Oldt RF, Weise JA, Viray J, Budowle B, Glenn Smith D, Kanthaswamy S. The genetic structure of native Americans in North America based on the Globalfiler® STRs. Legal Medicine (Tokyo, Japan). 23: 49-54. PMID 27890103 DOI: 10.1016/J.Legalmed.2016.09.007  0.49
2016 Kanthaswamy S, Ng J, Broatch J, Short J, Roberts J. Mitigating Chinese-Indian rhesus macaque (Macaca mulatta) hybridity at the California National Primate Research Center (CNPRC). Journal of Medical Primatology. PMID 27466971 DOI: 10.1111/Jmp.12231  0.435
2016 Ng J, Oldt RF, McCulloh KL, Weise JA, Viray J, Budowle B, Smith DG, Kanthaswamy S. Native American population data based on the Globalfiler(®) autosomal STR loci. Forensic Science International. Genetics. PMID 27421760 DOI: 10.1016/J.Fsigen.2016.06.014  0.546
2016 Wendt FR, Churchill JD, Novroski NM, King JL, Ng J, Oldt RF, McCulloh KL, Weise JA, Smith DG, Kanthaswamy S, Budowle B. Genetic analysis of the Yavapai Native Americans from West-Central Arizona using the Illumina MiSeq FGx™ forensic genomics system. Forensic Science International. Genetics. 24: 18-23. PMID 27243782 DOI: 10.1016/J.Fsigen.2016.05.008  0.577
2016 Kanthaswamy S, Ng J, Hernández-Pacheco R, Ruiz-Lambides A, Maldonado E, Martínez MI, Sariol CA. The Population Genetic Composition of Conventional and SPF Colonies of Rhesus Macaques (Macaca mulatta) at the Caribbean Primate Research Center. Journal of the American Association For Laboratory Animal Science : Jaalas. 55: 147-51. PMID 27025804  0.456
2015 Ng J, Fass JN, Durbin-Johnson B, Smith DG, Kanthaswamy S. Identifying rhesus macaque gene orthologs using heterospecific human CNV probes. Genomics Data. 6: 202-7. PMID 26697375 DOI: 10.1016/J.Gdata.2015.09.016  0.509
2015 Kanthaswamy S. Review: domestic animal forensic genetics - biological evidence, genetic markers, analytical approaches and challenges. Animal Genetics. 46: 473-84. PMID 26364867 DOI: 10.1111/Age.12335  0.481
2015 Ng J, Trask JS, Smith DG, Kanthaswamy S. Heterospecific SNP diversity in humans and rhesus macaque (Macaca mulatta). Journal of Medical Primatology. 44: 194-201. PMID 25963897 DOI: 10.1111/Jmp.12174  0.497
2015 Mendoza A, Ng J, Bales KL, Mendoza SP, George DA, Smith DG, Kanthaswamy S. Population genetics of the California National Primate Research Center's (CNPRC) captive Callicebus cupreus colony. Primates; Journal of Primatology. 56: 37-44. PMID 25179309 DOI: 10.1007/S10329-014-0446-Y  0.632
2014 Ng J, Satkoski J, Premasuthan A, Kanthaswamy S. A nuclear DNA-based species determination and DNA quantification assay for common poultry species. Journal of Food Science and Technology. 51: 4060-5. PMID 25477681 DOI: 10.1007/S13197-012-0893-7  0.318
2014 Smith DG, Ng J, George D, Trask JS, Houghton P, Singh B, Villano J, Kanthaswamy S. A genetic comparison of two alleged subspecies of Philippine cynomolgus macaques. American Journal of Physical Anthropology. 155: 136-48. PMID 24979664 DOI: 10.1002/Ajpa.22564  0.583
2014 Kanthaswamy S, Johnson Z, Trask JS, Smith DG, Ramakrishnan R, Bahk J, Ng J, Wiseman R, Kubisch HM, Vallender EJ, Rogers J, Ferguson B. Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta). American Journal of Primatology. 76: 1105-13. PMID 24953496 DOI: 10.1002/Ajp.22290  0.633
2014 Nikzad S, Tan SG, Yong Seok Yien C, Ng J, Alitheen NB, Khan R, Rovie-Ryan JJ, Valdiani A, Khajeaian P, Kanthaswamy S. Genetic diversity and population structure of long-tailed macaque (Macaca fascicularis) populations in Peninsular Malaysia. Journal of Medical Primatology. 43: 433-44. PMID 24930735 DOI: 10.1111/Jmp.12130  0.519
2014 Hasan MK, Feeroz MM, Jones-Engel L, Engel GA, Kanthaswamy S, Smith DG. Diversity and molecular phylogeny of mitochondrial DNA of rhesus macaques (Macaca mulatta) in Bangladesh. American Journal of Primatology. 76: 1094-104. PMID 24810278 DOI: 10.1002/Ajp.22296  0.599
2013 Kanthaswamy S, Ng J, Satkoski Trask J, George DA, Kou AJ, Hoffman LN, Doherty TB, Houghton P, Smith DG. The genetic composition of populations of cynomolgus macaques (Macaca fascicularis) used in biomedical research. Journal of Medical Primatology. 42: 120-31. PMID 23480663 DOI: 10.1111/Jmp.12043  0.548
2013 Satkoski Trask J, George D, Houghton P, Kanthaswamy S, Smith DG. Population and landscape genetics of an introduced species (M. fascicularis) on the island of Mauritius. Plos One. 8: e53001. PMID 23341917 DOI: 10.1371/Journal.Pone.0053001  0.594
2013 Satkoski Trask JA, Garnica WT, Smith DG, Houghton P, Lerche N, Kanthaswamy S. Single-nucleotide polymorphisms reveal patterns of allele sharing across the species boundary between rhesus (Macaca mulatta) and cynomolgus (M. fascicularis) macaques. American Journal of Primatology. 75: 135-44. PMID 23165690 DOI: 10.1002/Ajp.22091  0.571
2012 Kanthaswamy S, Trask JS, Ross CT, Kou A, Houghton P, Smith DG, Lerche N. A large-scale SNP-based genomic admixture analysis of the captive rhesus macaque colony at the California National Primate Research Center. American Journal of Primatology. 74: 747-57. PMID 24436199 DOI: 10.1002/Ajp.22025  0.629
2012 Premasuthan A, Ng J, Kanthaswamy S, Trask JS, Houghton P, Farkas T, Sestak K, Smith DG. Molecular ABO phenotyping in cynomolgus macaques using real-time quantitative PCR. Tissue Antigens. 80: 363-7. PMID 22861170 DOI: 10.1111/J.1399-0039.2012.01935.X  0.491
2012 Taormina PL, Satkoski Trask JA, Smith DG, Kanthaswamy S. Variation in CCL3L1 copy number in rhesus macaques (Macaca mulatta). Comparative Medicine. 62: 218-24. PMID 22776055  0.423
2012 Kanthaswamy S, Premasuthan A. Quadriplex real-time PCR (qPCR) assay for human-canine-feline species identification and nuclear DNA quantification. Forensic Science International-Genetics. 6. PMID 21962833 DOI: 10.1016/J.Fsigen.2011.09.001  0.312
2012 Smalling BB, Satkoski JA, Tom BK, Yi Szeto W, Erickson BJ, Spear TF, Smith DG, Budowle B, Webb KM, Allard M, Kanthaswamy S. Geographic Differences in Mitochondrial DNA (mtDNA) Distribution Among United States (US) Domestic Dog Populations # The Open Forensic Science Journal. 3: 22-32. DOI: 10.2174/1874402801003010022  0.545
2011 Trask JS, Garnica WT, Kanthaswamy S, Malhi RS, Smith DG. 4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta). Genomics. 98: 352-8. PMID 21907785 DOI: 10.1016/J.Ygeno.2011.08.004  0.579
2011 Trask JS, Garnica WT, Malhi RS, Kanthaswamy S, Smith DG. High-throughput single-nucleotide polymorphism discovery and the search for candidate genes for long-term SIVmac nonprogression in Chinese rhesus macaques (Macaca mulatta). Journal of Medical Primatology. 40: 224-32. PMID 21781130 DOI: 10.1111/J.1600-0684.2011.00486.X  0.543
2011 Kanthaswamy S, Premasuthan A, Ng J, Satkoski J, Goyal V. Quantitative real-time PCR (qPCR) assay for human-dog-cat species identification and nuclear DNA quantification. Forensic Science International. Genetics. 6: 290-5. PMID 21764401 DOI: 10.1016/J.Fsigen.2011.06.005  0.346
2011 Barr A, Premasuthan A, Satkoski J, Smith DG, George D, Kanthaswamy S. A rapid quantitative real-time PCR-based DNA quantification assay coupled with species--assignment capabilities for two hybridizing Macaca species. Folia Primatologica; International Journal of Primatology. 82: 71-80. PMID 21646786 DOI: 10.1159/000328124  0.527
2011 Kanthaswamy S, Clarke PM, Kou A, Malladi V, Trask JS, Smith DG. Association between hybrid status and reproductive success of captive male and female rhesus macaques (Macaca mulatta) at the California National Primate Research Center (CNPRC). American Journal of Primatology. 73: 671-8. PMID 21433046 DOI: 10.1002/Ajp.20948  0.532
2011 Premasuthan A, Kanthaswamy S, Satkoski J, Smith DG. A simple multiplex polymerase chain reaction to determine ABO blood types of rhesus macaques (Macaca mulatta). Tissue Antigens. 77: 584-8. PMID 21395559 DOI: 10.1111/J.1399-0039.2010.01602.X  0.489
2011 Fan P, Xiao W, Feng J, Scott MB, Farris ZJ, Morelli TL, Sefczek T, Wright PC, Barr A, Premasuthan A, Satkoski J, Smith DG, George D, Kanthaswamy S, McIntosh AM, et al. The Evolution of Exudativory in Primates Folia Primatologica. 82: 81-82. DOI: 10.1159/000328875  0.41
2010 Smalling BB, Satkoski JA, Tom BK, Yi Szeto W, Erickson BJ, Spear TF, Smith DG, Budowle B, Webb KM, Allard M, Kanthaswamy S. Geographic Differences in Mitochondrial DNA (mtDNA) Distribution Among United States (US) Domestic Dog Populations # ~!2010-01-07~!2010-04-02~!2010-05-17~! The Open Forensic Science Journal. 3: 22-32. DOI: 10.2174/1874402801003020022  0.482
2009 Kanthaswamy S, Capitanio JP, Dubay CJ, Ferguson B, Folks T, Ha JC, Hotchkiss CE, Johnson ZP, Katze MG, Kean LS, Kubisch HM, Lank S, Lyons LA, Miller GM, Nylander J, et al. Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs). Journal of Medical Primatology. 38: 17-23. PMID 19863674 DOI: 10.1111/J.1600-0684.2009.00371.X  0.569
2009 Flynn S, Satkoski J, Lerche N, Kanthaswamy S, Smith DG. Genetic variation at the TNF-alpha promoter and malaria susceptibility in rhesus (Macaca mulatta) and long-tailed (Macaca fascicularis) macaques. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 9: 769-77. PMID 19570728 DOI: 10.1016/J.Meegid.2009.03.011  0.513
2009 Kanthaswamy S, Gill L, Satkoski J, Goyal V, Malladi V, Kou A, Basuta K, Sarkisyan L, George D, Smith DG. Development of a Chinese-Indian hybrid (Chindian) rhesus macaque colony at the California National Primate Research Center by introgression. Journal of Medical Primatology. 38: 86-96. PMID 18715266 DOI: 10.1111/J.1600-0684.2008.00305.X  0.571
2008 Baute DT, Satkoski JA, Spear TF, Smith DG, Dayton MR, Malladi VS, Goyal V, Kou A, Kinaga JL, Kanthaswamy S. Analysis of forensic SNPs in the canine mtDNA HV1 mutational hotspot region. Journal of Forensic Sciences. 53: 1325-33. PMID 18808373 DOI: 10.1111/J.1556-4029.2008.00880.X  0.607
2008 Satkoski JA, Malhi RS, Kanthaswamy S, Tito RY, Malladi VS, Smith DG. Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta) Bmc Genomics. 9. PMID 18510772 DOI: 10.1186/1471-2164-9-256  0.601
2008 Himmelberger AL, Spear TF, Satkoski JA, George DA, Garnica WT, Malladi VS, Smith DG, Webb KM, Allard MW, Kanthaswamy S. Forensic utility of the mitochondrial hypervariable region 1 of domestic dogs, in conjunction with breed and geographic information. Journal of Forensic Sciences. 53: 81-9. PMID 18279243 DOI: 10.1111/J.1556-4029.2007.00615.X  0.545
2007 Malhi RS, Sickler B, Lin D, Satkoski J, Tito RY, George D, Kanthaswamy S, Smith DG. MamuSNP: a resource for Rhesus Macaque (Macaca mulatta) genomics. Plos One. 2: e438. PMID 17487284 DOI: 10.1371/Journal.Pone.0000438  0.523
2007 Evans JJ, Wictum EJ, Penedo MC, Kanthaswamy S. Real-time polymerase chain reaction quantification of canine DNA. Journal of Forensic Sciences. 52: 93-6. PMID 17209917 DOI: 10.1111/J.1556-4029.2006.00305.X  0.325
2006 Kanthaswamy S, Kurushima JD, Smith DG. Inferring Pongo conservation units: a perspective based on microsatellite and mitochondrial DNA analyses. Primates; Journal of Primatology. 47: 310-21. PMID 16783503 DOI: 10.1007/S10329-006-0191-Y  0.592
2006 Kanthaswamy S, von Dollen A, Kurushima JD, Alminas O, Rogers J, Ferguson B, Lerche NW, Allen PC, Smith DG. Microsatellite markers for standardized genetic management of captive colonies of rhesus macaques (Macaca mulatta). American Journal of Primatology. 68: 73-95. PMID 16419121 DOI: 10.1002/Ajp.20207  0.588
2006 Glenn Smith D, George D, Kanthaswamy S, McDonough J. Identification of Country of Origin and Admixture Between Indian and Chinese Rhesus Macaques International Journal of Primatology. 27: 881-898. DOI: 10.1007/S10764-006-9026-3  0.456
2006 Kanthaswamy S, Dollen AV, Kurushima JD, Alminas O, Rogers J, Ferguson B, Lerche NW, Allen PC, Smith DG. Erratum: Microsatellite markers for standardized genetic management of captive colonies of rhesus macaques (Macaca, mulatta) (American Journal Primatology (2006) 68 (73-95)) American Journal of Primatology. 68. DOI: 10.1002/Ajp.20248  0.522
2004 Kanthaswamy S, Smith DG. Effects of geographic origin on captive Macaca mulatta mitochondrial DNA variation. Comparative Medicine. 54: 193-201. PMID 15134366  0.568
2002 Kanthaswamy S, Smith DG. Population subdivision and gene flow among wild orangutans. Primates; Journal of Primatology. 43: 315-27. PMID 12426465 DOI: 10.1007/Bf02629605  0.604
2002 Kanthaswamy S, Smith DG. Assessment of genetic management at three specific-pathogen-free rhesus macaque (Macaca mulatta) colonies. Comparative Medicine. 52: 414-23. PMID 12405633  0.524
2001 Kanthaswamy S, Binida-Emonds ORP, Warden C, Viray JL, Smith DG. Use of SSR fragment length homozygotes for orangutan systematics Primates. 42: 35-45. DOI: 10.1007/Bf02640687  0.603
1999 Smith DG, Kanthaswamy S, Viray J, Cody L. Additional highly polymorphic microsatellite (STR) loci for estimating kinship in rhesus macaques (Macaca mulatta). American Journal of Primatology. 50: 1-7. PMID 10588431 DOI: 10.1002/(Sici)1098-2345(200001)50:1<1::Aid-Ajp1>3.0.Co;2-T  0.601
1999 Smith DG, Kanthaswamy S, Disbrow M, Wagner JL. International Journal of Primatology. 20: 415-429. DOI: 10.1023/A:1020504905350  0.413
1998 Kanthaswamy S, Smith DG. Use of microsatellite polymorphisms for paternity exclusion in rhesus macaques (Macaca multatta) Primates. 39: 135-145. DOI: 10.1007/Bf02557726  0.562
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