Paul M. Magwene - Publications

Affiliations: 
Duke University, Durham, NC 
Area:
evolutionary genomics, quantitative genetics, computational biology, systems biology

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sauters TJC, Roth C, Murray D, Sun S, Floyd Averette A, Onyishi CU, May RC, Heitman J, Magwene PM. Amoeba predation of Cryptococcus: A quantitative and population genomic evaluation of the accidental pathogen hypothesis. Plos Pathogens. 19: e1011763. PMID 37956179 DOI: 10.1371/journal.ppat.1011763  0.793
2023 Vijayraghavan S, Kozmin SG, Strope PK, Skelly DA, Magwene PM, Dietrich FS, McCusker JH. RNA viruses, M satellites, chromosomal killer genes, and killer/non-killer phenotypes in the 100-genomes S. cerevisiae strains. G3 (Bethesda, Md.). PMID 37497616 DOI: 10.1093/g3journal/jkad167  0.683
2023 Gusa A, Yadav V, Roth C, Williams JD, Shouse EM, Magwene P, Heitman J, Jinks-Robertson S. Genome-wide analysis of heat stress-stimulated transposon mobility in the human fungal pathogen . Proceedings of the National Academy of Sciences of the United States of America. 120: e2209831120. PMID 36669112 DOI: 10.1073/pnas.2209831120  0.773
2022 Priest SJ, Yadav V, Roth C, Dahlmann TA, Kück U, Magwene PM, Heitman J. Uncontrolled transposition following RNAi loss causes hypermutation and antifungal drug resistance in clinical isolates of Cryptococcus neoformans. Nature Microbiology. 7: 1239-1251. PMID 35918426 DOI: 10.1038/s41564-022-01183-z  0.761
2022 Sun S, Roth C, Floyd Averette A, Magwene PM, Heitman J. Epistatic genetic interactions govern morphogenesis during sexual reproduction and infection in a global human fungal pathogen. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35169080 DOI: 10.1073/pnas.2122293119  0.799
2021 Roth C, Murray D, Scott A, Fu C, Averette AF, Sun S, Heitman J, Magwene PM. Pleiotropy and epistasis within and between signaling pathways defines the genetic architecture of fungal virulence. Plos Genetics. 17: e1009313. PMID 33493169 DOI: 10.1371/journal.pgen.1009313  0.775
2018 Vijayraghavan S, Kozmin SG, Strope PK, Skelly DA, Lin Z, Kennell J, Magwene PM, Dietrich FS, McCusker JH. Mitochondrial Genome Variation Affects Multiple Respiration and Non-respiration Phenotypes in . Genetics. PMID 30498022 DOI: 10.1534/Genetics.118.301546  0.693
2018 Kayikci Ö, Magwene PM. Divergent Roles for cAMP--PKA Signaling in the Regulation of Filamentous Growth in and . G3 (Bethesda, Md.). PMID 30213866 DOI: 10.1534/G3.118.200413  0.733
2018 Roth C, Sun S, Billmyre RB, Heitman J, Magwene PM. A High Resolution Map of Meiotic Recombination inDemonstrates Decreased Recombination in Unisexual Reproduction. Genetics. PMID 29625994 DOI: 10.1534/Genetics.118.300996  0.786
2017 Ehrenreich IM, Magwene PM. Genetic Analysis of Complex Traits in Saccharomyces cerevisiae. Cold Spring Harbor Protocols. 2017: pdb.top077602. PMID 28572210 DOI: 10.1101/Pdb.Top077602  0.37
2017 Ehrenreich IM, Magwene PM. Genetic Dissection of Heritable Traits in Yeast Using Bulk Segregant Analysis. Cold Spring Harbor Protocols. 2017: pdb.prot088989. PMID 28572183 DOI: 10.1101/Pdb.Prot088989  0.35
2017 Skelly DA, Magwene PM, Meeks B, Murphy HA. Known mutator alleles do not markedly increase mutation rate in clinical Saccharomyces cerevisiae strains. Proceedings. Biological Sciences. 284. PMID 28404772 DOI: 10.1098/Rspb.2016.2672  0.758
2017 Maxwell CS, Magwene PM. When sensing is gambling: An experimental system reveals how plasticity can generate tunable bet-hedging strategies. Evolution; International Journal of Organic Evolution. 71: 859-871. PMID 28213964 DOI: 10.1111/evo.13199  0.729
2017 Maxwell CS, Magwene PM. The quick and the dead: microbial demography at the yeast thermal limit. Molecular Ecology. 26: 1631-1640. PMID 27988974 DOI: 10.1111/mec.13955  0.751
2015 Skelly DA, Magwene PM, Stone EA. Sporadic, Global Linkage Disequilibrium between Unlinked Segregating Sites. Genetics. PMID 26715671 DOI: 10.1534/Genetics.115.177816  0.722
2015 Skelly DA, Magwene PM. Population perspectives on functional genomic variation in yeast. Briefings in Functional Genomics. PMID 26467711 DOI: 10.1093/Bfgp/Elv044  0.743
2015 Strope PK, Kozmin SG, Skelly DA, Magwene PM, Dietrich FS, McCusker JH. 2μ plasmid in Saccharomyces species and in Saccharomyces cerevisiae. Fems Yeast Research. 15. PMID 26463005 DOI: 10.1093/Femsyr/Fov090  0.684
2015 Strope PK, Skelly DA, Kozmin SG, Mahadevan G, Stone EA, Magwene PM, Dietrich FS, McCusker JH. The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen. Genome Research. 25: 762-74. PMID 25840857 DOI: 10.1101/Gr.185538.114  0.758
2014 Magwene PM. Revisiting Mortimer's Genome Renewal Hypothesis: heterozygosity, homothallism, and the potential for adaptation in yeast. Advances in Experimental Medicine and Biology. 781: 37-48. PMID 24277294 DOI: 10.1007/978-94-007-7347-9_3  0.344
2013 Magwene PM, Socha JJ. Biomechanics of turtle shells: how whole shells fail in compression. Journal of Experimental Zoology. Part a, Ecological Genetics and Physiology. 319: 86-98. PMID 23203474 DOI: 10.1002/Jez.1773  0.458
2013 Granek JA, Murray D, Kayrkçi Ö, Magwene PM. The genetic architecture of biofilm formation in a clinical isolate of Saccharomyces cerevisiae. Genetics. 193: 587-600. PMID 23172850 DOI: 10.1534/Genetics.112.142067  0.746
2011 Granek JA, Kayıkçı Ö, Magwene PM. Pleiotropic signaling pathways orchestrate yeast development. Current Opinion in Microbiology. 14: 676-81. PMID 21962291 DOI: 10.1016/J.Mib.2011.09.004  0.761
2011 Lee HN, Magwene PM, Brem RB. Natural variation in CDC28 underlies morphological phenotypes in an environmental yeast isolate. Genetics. 188: 723-30. PMID 21527779 DOI: 10.1534/genetics.111.128819  0.392
2011 Magwene PM, Kayıkçı Ö, Granek JA, Reininga JM, Scholl Z, Murray D. Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 108: 1987-92. PMID 21245305 DOI: 10.1073/Pnas.1012544108  0.713
2010 Granek JA, Magwene PM. Environmental and genetic determinants of colony morphology in yeast. Plos Genetics. 6: e1000823. PMID 20107600 DOI: 10.1371/Journal.Pgen.1000823  0.746
2009 Munger SC, Aylor DL, Syed HA, Magwene PM, Threadgill DW, Capel B. Elucidation of the transcription network governing mammalian sex determination by exploiting strain-specific susceptibility to sex reversal Genes and Development. 23: 2521-2536. PMID 19884258 DOI: 10.1101/Gad.1835809  0.705
2004 Magwene PM, Kim J. Estimating genomic coexpression networks using first-order conditional independence. Genome Biology. 5: R100. PMID 15575966 DOI: 10.1186/Gb-2004-5-12-R100  0.533
2003 Magwene PM, Lizardi P, Kim J. Reconstructing the temporal ordering of biological samples using microarray data. Bioinformatics (Oxford, England). 19: 842-50. PMID 12724294 DOI: 10.1093/Bioinformatics/Btg081  0.497
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